Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma01g02587 | ATGTTTTCCAAGCTCCATCACCGTCAACCTCAATCCCTCCCCTTTTCTAATCCCTTCCAAATCCCTGCAAGAGAATGTCATCACCCGGAGGAAGAAGAAGAAGTAAGCCCCGTATGTCGTACACCATCCAGAAAGACCTCCGAGCCATCCTCCGGCGACTGCGCCACGATTGAAGTTGTCAAACGCCCCCGTGGCCGGCCTCCTGGCTCCAAGAACAAACCCAAAACGGGGGTTGTTGTCGCTCGCGATCCGGAGCCTTCGATGAGCCCTTATATTCTCGAAGTTCCCGGAGGTAGTGATGTCGTCGAAGCCATTGCCCGCTTTTGCCGCCGAAAAAATATGGGGCTTTGTGTTCTCTCGGGCTCTGGCACGGTTTCTAACGTTACTCTACAGCAACCATCTACCACTCCCGAAGCGACGGTGACTTTTCATGGTCGGTTTCATATACTCTCCATCTGCGCCACTTCATTTCTGGTTCCCAATGGTTTTGCTGTCTATCTGGCTGGTCCTCAAGGCCAGGTCGTCGGCGGTTTAGTCTCTGGAAACTTGATTGCCGCCGGAAGTGTGTTCGTTATAGCTTCTTCGTTCGACAATCCGTCTTATCACCGACTTTCGGATGAGGATGAGACTAGAAACTCAGACGCTAGCGGTGGCGGTGAGAAAAATTCTCCTATAGTCTCCGGTGCTAGAGATAGTGTGAGTCACGCTCCAGCGGAATCGGGCGGCATGCCTACTTATAGCTGCCGCGTTCCCTCCGATGTAATATGGGCTCCCACTGCAAGAGCACCACCACCACCATACTAA | 804 | 52.86 | MFSKLHHRQPQSLPFSNPFQIPARECHHPEEEEEVSPVCRTPSRKTSEPSSGDCATIEVVKRPRGRPPGSKNKPKTGVVVARDPEPSMSPYILEVPGGSDVVEAIARFCRRKNMGLCVLSGSGTVSNVTLQQPSTTPEATVTFHGRFHILSICATSFLVPNGFAVYLAGPQGQVVGGLVSGNLIAAGSVFVIASSFDNPSYHRLSDEDETRNSDASGGGEKNSPIVSGARDSVSHAPAESGGMPTYSCRVPSDVIWAPTARAPPPPY | 267 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 83506095 | 83508835 | + | Bma003473.1 | Bma01g02587 | 77104 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma01g02587 | 267 | MobiDBLite | consensus disorder prediction | 24 | 39 | - | - | |
Bma01g02587 | 267 | MobiDBLite | consensus disorder prediction | 1 | 83 | - | - | |
Bma01g02587 | 267 | MobiDBLite | consensus disorder prediction | 201 | 249 | - | - | |
Bma01g02587 | 267 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 24 | 266 | IPR014476 | GO:0003680 | |
Bma01g02587 | 267 | ProSiteProfiles | PPC domain profile profile. | 85 | 217 | IPR005175 | - | |
Bma01g02587 | 267 | Gene3D | - | 89 | 215 | - | - | |
Bma01g02587 | 267 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 17-RELATED | 24 | 266 | - | - | |
Bma01g02587 | 267 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 87 | 209 | - | - | |
Bma01g02587 | 267 | MobiDBLite | consensus disorder prediction | 201 | 215 | - | - | |
Bma01g02587 | 267 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 90 | 198 | IPR005175 | - | |
Bma01g02587 | 267 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Bma01g02587 | 267 | CDD | DUF296 | 90 | 194 | IPR005175 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02587 | Bma-Chr1:83506095 | Bma02g01165 | Bma-Chr2:53776721 | 4.92E-48 | dispersed | |
Bma01g02587 | Bma-Chr1:83506095 | Bma02g00110 | Bma-Chr2:1002028 | 5.85E-94 | wgd | |
Bma01g02587 | Bma-Chr1:83506095 | Bma04g00433 | Bma-Chr4:3552874 | 4.65E-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma01g02587 | - | - | zju:107421268 | 349.362 |