Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02612 ATGGAGAAGTTGTGCTGTTTCAATGCTTCCGGGTTCGTTGGAGGACGATCCTCGTCCAGCTCCGGGAAGGGAAGAAACTATGAGGGTTTAATCAAGTATGGTTTCAACCTAGTCAAAGGGAAAGCTAATCACCCCATGGAGGATTATCATGTGGCTAAGTTTGTGCAGATTGAGAAACATGAGTTAGGGCTGTTTGCTATTTACGACGGCCATTTGGGAGATACTGTGCCTGCTTACTTACAGAAGCATTTATTTTCCAATATTCTAAAAGAGAAAGAATTCTGGAACGAGCCTCGTGCATCTATCTTAAAAGCCTATGAGAAGACAGATCAAGCCATTCTCTCACGTAGCTCTGACTTGGGACGGGGTGGTTCCACTGCCGTTACTGCTATCCTGATCGATGGTCGGAGATTATTCATTGCTAATGTCGGAGATTCACGGGCAGTTATATCAAGAGCTGGTAAGGCGGAGCAAATGACCATAGATCACGAACCCAATACAGAACGAGGCAGCATCGAAGACAAAGGCGGTTTTGTCTCAAACATGCCAGGAGATGTCCCTAGAGTCAACGGACAGTTGGCAGTTTCTCGAGCCTTCGGAGACAAGAGCCTGAAATCTCATTTGCGATCAGACCCGGATATTCAAGAGATTACCATCGATGCGAACACAGATGTATTGATCCTCGCAAGTGATGGTCTTTGGAAGGTAATGGCAAATCAAGAAGCAGTTGATATTGCAAGGAGGATCAAAGATCCTTTAAAAGCTGCCAAGCAATTAACTGTGGAAGCATTGAAGAAAGACAGCAAAGATGATATATCCTGCATCGTCGTGAGATTCCGATGA 843 45.08 MEKLCCFNASGFVGGRSSSSSGKGRNYEGLIKYGFNLVKGKANHPMEDYHVAKFVQIEKHELGLFAIYDGHLGDTVPAYLQKHLFSNILKEKEFWNEPRASILKAYEKTDQAILSRSSDLGRGGSTAVTAILIDGRRLFIANVGDSRAVISRAGKAEQMTIDHEPNTERGSIEDKGGFVSNMPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDIQEITIDANTDVLILASDGLWKVMANQEAVDIARRIKDPLKAAKQLTVEALKKDSKDDISCIVVRFR 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83699069 83701373 - Bma003497.1 Bma01g02612 77129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02612 280 ProSiteProfiles PPM-type phosphatase domain profile. 32 279 IPR001932 -
Bma01g02612 280 CDD PP2Cc 31 279 IPR001932 -
Bma01g02612 280 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 7 279 - -
Bma01g02612 280 SUPERFAMILY PP2C-like 30 279 IPR036457 -
Bma01g02612 280 Pfam Protein phosphatase 2C 41 272 IPR001932 -
Bma01g02612 280 Gene3D - 28 280 IPR036457 -
Bma01g02612 280 PANTHER PROTEIN PHOSPHATASE 2C 7 279 IPR015655 GO:0004722|GO:0006470
Bma01g02612 280 SMART PP2C_4 28 277 IPR001932 -
Bma01g02612 280 SMART PP2C_SIG_2 43 279 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02612 Bma-Chr1:83699069 Bma05g00569 Bma-Chr5:33234728 3.73E-155 dispersed
Bma01g02612 Bma-Chr1:83699069 Bma07g00627 Bma-Chr7:9974271 4.05E-115 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02612 K17506 - pop:7468895 470.314