Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02625 ATGGGTAGGAATGGTTATTCAATGGACGAGGAACTTCAAACGAAAGAGATGGATAGTAGAAGTTTATCGTCTTCGCGCAATCAAGCACAGGACGAGACATTCATTCACAAAGTGGGGATTCCTCCAAAGCAGAACCTTTTTAAGGAGTTCAAGAACAACTTGAAAGAAACATTTTTTGCAGACGATCCTCTTCGATCTTTTAAAGATCAGTCCAAGTCTCGGAAAGTAATTCTAGGCTTTCAAGCTGTTTTCCCCATTCTTGAGTGGGGAAGAAGCTATAATCTAAGTAAATTTAGAGGGGATCTTATTGCTGGACTCACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGATATGCTAAGCTGGCCAATTTGGCTCCGCAGTATGGGCTGTACTCAAGCTTTGTTCCACCATTGATATATGCCTTTATGGGTAGCTCAAGAGATATAGCCATTGGACCAGTGGCCGTCGTTTCTCTCTTGTTAGGCACCCTTCTTCAAAACGAGATCGATCCCGTCACGAACGCACCGGAGTACTTACGACTCGCATTTACTGCTACTTTTTTCGCTGGAATCACTCAAGTCTCCCTCGGAATTTTGAGGCTAGGCTTCTTGATTGACTTTTTATCTCATGCTGCCATTGTTGGATTTATGGGTGGAGCTGCCATTACCATTGCTCTTCAGCAGCTCAAGGGATTTCTTGGAATAAGAAAATTCACAAAGAAAACAGATATAATCTCTGTTATGCATTCAGTATTCAGCTCAGCCCACCATGGATGGAACTGGCAGACTATGGTCATTGGAGCAAGCTTCCTAAGTTTTCTTTTGCTTACTAAACAAATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTTCTCCTTTGATATCTGTCGTTCTATCCACCCTTTTCGTTTACCTTACTCATGCAGAAAAGAAAGGGGTTGACATTGTGAGACATATAGAGAAAGGAATCAATCCACCATCAGTTAATCAAATATTTTTTACGGGTGAATACCTCGCCAAAGGTTTCAGGATCGGCGTTGTTGCTGGAATGATAGCTCTAACGGAAGCAACTGCAATAGGAAGAACATTCGCTTCAATGAAAGACTACCAACTCGATGGGAACAAAGAAATGGTTGCACTAGGAACTATGAATGTTGTTGGTTCGATGACTTCCTGCTATGTGGCGACAGGTTCGTTTTCACGGTCAGCTGTGAATTACATGGCGGGATGTCAAACGGCAGTTTCTAACATTGTGATGTCTATTGTTGTGTTCCTAACTTTGGAGTTTATCACCCCTCTTTTCAAATACACTCCAAATGCCATTCTTTCTGCCATTATTATCTCGGCTGTGATCAACCTAATCGACATTCAGGCTGCAATTTTGATATGGAAGGTCGATAAATTTGATTTCGTCGCTTGCATCGGAGCCTTCTTTGGTGTTATTTTTGCCTCTGTCGAAATAGGCCTTCTAATTGCAGTCTCTATATCCTTCGCTAAGATCCTCTTACAAGTCACAAGACCAAGGACTGCTCTTCTCGGACAAATCCCTCGGACGATGGTTTACAGAAATATCCAACAGTACCCAGATGCAACTAAGGTGCCTGGCGTTTTGATTGTCCGAGTTGATTCTGCAATTTACTTTTCCAACTCCAATTACACCAAAGAAAGGATACTGAGATGGTTGACAGATGAAGAAGAACAAATAAAGAAGTCTTACCTACCCAAAATCCAGTTTTTGGTAGTTGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGTTATATAGGAGCCTCCAAAAGAGAGAGGTCCAGCTTGTTCTGGCAAATCCTGGGCCGGCGGTGATAGACAAGCTTCACACATCCGATTTCGAAGTTTGA 1908 42.19 MGRNGYSMDEELQTKEMDSRSLSSSRNQAQDETFIHKVGIPPKQNLFKEFKNNLKETFFADDPLRSFKDQSKSRKVILGFQAVFPILEWGRSYNLSKFRGDLIAGLTIASLCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLQNEIDPVTNAPEYLRLAFTATFFAGITQVSLGILRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIRKFTKKTDIISVMHSVFSSAHHGWNWQTMVIGASFLSFLLLTKQIGKKNKKLFWVPAISPLISVVLSTLFVYLTHAEKKGVDIVRHIEKGINPPSVNQIFFTGEYLAKGFRIGVVAGMIALTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLEFITPLFKYTPNAILSAIIISAVINLIDIQAAILIWKVDKFDFVACIGAFFGVIFASVEIGLLIAVSISFAKILLQVTRPRTALLGQIPRTMVYRNIQQYPDATKVPGVLIVRVDSAIYFSNSNYTKERILRWLTDEEEQIKKSYLPKIQFLVVEMSPVTDIDTSGIHALEELYRSLQKREVQLVLANPGPAVIDKLHTSDFEV 635
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83812419 83815429 - Bma003510.3 Bma01g02625 77142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02625 635 Pfam STAS domain 531 633 IPR002645 -
Bma01g02625 635 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
Bma01g02625 635 Gene3D STAS domain 510 635 IPR036513 -
Bma01g02625 635 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Bma01g02625 635 SUPERFAMILY SpoIIaa-like 532 633 IPR036513 -
Bma01g02625 635 TIGRFAM sulP: sulfate permease 85 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g02625 635 ProSiteProfiles STAS domain profile. 530 635 IPR002645 -
Bma01g02625 635 PANTHER SULFATE TRANSPORTER 1.3 16 633 - -
Bma01g02625 635 CDD STAS_SulP_like_sulfate_transporter 531 633 - -
Bma01g02625 635 MobiDBLite consensus disorder prediction 1 29 - -
Bma01g02625 635 PANTHER SULFATE TRANSPORTER 16 633 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02625 Bma04g00464 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02625 Bma-Chr1:83812419 Bma13g00014 Bma-Chr13:285982 0 dispersed
Bma01g02625 Bma-Chr1:83812419 Bma01g02626 Bma-Chr1:83823968 0 tandem
Bma01g00847 Bma-Chr1:8011357 Bma01g02625 Bma-Chr1:83812419 0 transposed
Bma03g00114 Bma-Chr3:896303 Bma01g02625 Bma-Chr1:83812419 2.68E-130 transposed
Bma15g00623 Bma-Chr15:7974865 Bma01g02625 Bma-Chr1:83812419 0 transposed
Bma15g01025 Bma-Chr15:40744562 Bma01g02625 Bma-Chr1:83812419 0 transposed
Bma01g00871 Bma-Chr1:8168212 Bma01g02625 Bma-Chr1:83812419 2.51E-83 wgd
Bma01g02625 Bma-Chr1:83812419 Bma05g01398 Bma-Chr5:53381935 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02625 K17470 - jre:109012458 1056.59