Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02626 ATGGGTAGGAATGGTTATTTAACGGACGAGGAACTTGAAATGAAAGGGATGGATAGTGGAAGTTTATCGTCTTTGCATAATCAAGTACAGGACGAGACATTCATTCACAAAGTGGGGATTCCTCCAAAGCAAAACCTTTTTAAGGAGTTCAAGAACAACTTGAAAGAAACATTTTTTGCAGACGATCCTCTTCGATCTTTTAAACATCAGTCCAAGTCTCAGAAAGTAATTCTAGGCTTTCAAGCTGTTTTCCCCATTCTTGAGTGGGGAAGAAGCTATAATCTACGTAAATTTAGAGGGGATCTTATTGCTGGACTCACCATTGCAAGTGTCTGCATTCCTCAGGATATTGGATATGCTAAGCTGGCCAATTTGGCTCCGCAGTATGGGCTGTACTCAAGCTTTGTTCCACCATTGATATATGCCTTTATGGGTAGCTCTAGAGATATAGTTATTGGACCAGTGGGCGTCGTTTCTCTCTTGTTAGGCACCCTTCTTCAAAACGAGATCGATCCCGTTACGAACGCACCGGAGTACTTACGACTCGCATTTACTGCTACTTTTTTCGCTGGAATCACTCAAGTCTTCCTCGGAATTTTGAGGCTAGGCTTCTTGATTGACTTTTTATCTCATGCTGCCATTGTTGGATTTGTGGGTGGAGCTGCCATTACCATTGCTCTTCAGCAGCTCAAGGGATTTCTTGGAATAAGAAAATTCACAAAGAAAACAGATATAATCTCTGTTATGCATTCGGTATTCAGCTCAGCCCACCATGGATGGAACTGGCAGACTATGGTCATTGGAGCAAGCTTCCTAAGTTTTCTTTTGCTTACTAAACAAATTGGAAAGAAAAACAAGAAACTTTTCTGGGTACCTGCAATTTCTCCTCTGATATCTGTCGTTCTATCCACCCTTTTCGTTTACCTTACTCATGCAGAAAAGAAAGGGGTTAACATTGTGAGACATATAGAGAAAGGAATCAATCCACCATCAGTTAATCAAATATTTTTTACGGGTGAATACCTCACCAAAGGTTTCAGGATCGGCGTTGTTGCCGGAATGATAGGTCTAACGGAAGCAACTGCAATAGGAAGAACATTCGCTTCAATGAAAGACTACCAACTCGATGGGAACAAAGAAATGGTTGCACTGGGAACTATGAATGTTGTTGGTTCGATGACTTCCTGCTATGTGGCGACAGGTTCGTTTTCACGGTCAGCTGTGAATTACATGGCGGGATGTCAAACGGCAGTTTCTAACATTGTGATGTCTATTGTTGTGTTCCTAACTTTGGAGTTTATCACCCCTCTTTTCAAATACACTCCAAATGCCATTATTTCTGCCATTATTATCTCTGCTGTGATCAACCTGATAGACATTCAGGCTGCAATTTTGATATGGAAGGTCGATAAATTTGATTTCCTCGCTTGCATCGGAGCCTTCTTTGGTGTTATTTTTGCCTCTGTCGAAATAGGCCTTCTAAATGCAGTCTCTATATCCTTCGCTAAGATCCTCTTACAAGTCACAAGGCCAAGGACTGCTCTTCTCGGACAAATCCCTCGGACAATGGTTTACAGAAATATCCAACAGTACCCAGATGCAACTAAGGTGCCTGGCGTTTTGATTGTCCGAGTTGATTCTGCAATTTACTTTTCCAACTCCAATTACACCAAAGAAAGGATACTGAGATGGTTGACAGATGAAGAAGAACAAATAAAGAAGTCTTGCCTACCCAAAATCCAGTTTTTGGTAGTTGAAATGTCACCTGTTACTGACATTGACACCAGCGGAATTCATGCTTTGGAAGAGTTATATAGGAGCCTCCAAAAGAGAGAGGTCCAGCTTGTGCTGGCAAATCCTGGGCCGGCGGTGATAGACAAGCTTCACACATCCAATTTCGAAAGTTTGATTGGCGAGAACAACATTTTCCTCACCGTTGCAGAAGCCGTCGCAGCCTGTTCGCCGAAATTGGTTGAAGAACCATGA 1986 42.2 MGRNGYLTDEELEMKGMDSGSLSSLHNQVQDETFIHKVGIPPKQNLFKEFKNNLKETFFADDPLRSFKHQSKSQKVILGFQAVFPILEWGRSYNLRKFRGDLIAGLTIASVCIPQDIGYAKLANLAPQYGLYSSFVPPLIYAFMGSSRDIVIGPVGVVSLLLGTLLQNEIDPVTNAPEYLRLAFTATFFAGITQVFLGILRLGFLIDFLSHAAIVGFVGGAAITIALQQLKGFLGIRKFTKKTDIISVMHSVFSSAHHGWNWQTMVIGASFLSFLLLTKQIGKKNKKLFWVPAISPLISVVLSTLFVYLTHAEKKGVNIVRHIEKGINPPSVNQIFFTGEYLTKGFRIGVVAGMIGLTEATAIGRTFASMKDYQLDGNKEMVALGTMNVVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLEFITPLFKYTPNAIISAIIISAVINLIDIQAAILIWKVDKFDFLACIGAFFGVIFASVEIGLLNAVSISFAKILLQVTRPRTALLGQIPRTMVYRNIQQYPDATKVPGVLIVRVDSAIYFSNSNYTKERILRWLTDEEEQIKKSCLPKIQFLVVEMSPVTDIDTSGIHALEELYRSLQKREVQLVLANPGPAVIDKLHTSNFESLIGENNIFLTVAEAVAACSPKLVEEP 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83823968 83827057 - Bma003511.1 Bma01g02626 77143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02626 661 ProSiteProfiles STAS domain profile. 530 653 IPR002645 -
Bma01g02626 661 PANTHER SULFATE TRANSPORTER 20 660 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g02626 661 TIGRFAM sulP: sulfate permease 85 649 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bma01g02626 661 Pfam STAS domain 531 649 IPR002645 -
Bma01g02626 661 PANTHER SULFATE TRANSPORTER 1.3 20 660 - -
Bma01g02626 661 SUPERFAMILY SpoIIaa-like 532 654 IPR036513 -
Bma01g02626 661 CDD STAS_SulP_like_sulfate_transporter 531 646 - -
Bma01g02626 661 ProSitePatterns SLC26A transporters signature. 127 148 IPR018045 GO:0008271|GO:0008272
Bma01g02626 661 Pfam Sulfate permease family 98 478 IPR011547 GO:0016021
Bma01g02626 661 Gene3D STAS domain 525 656 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02626 Bma-Chr1:83823968 Bma05g01398 Bma-Chr5:53381935 0 dispersed
Bma01g02625 Bma-Chr1:83812419 Bma01g02626 Bma-Chr1:83823968 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02626 K17470 - jre:108997232 1047.34