Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02638 ATGCATCATTTACCGCAATTTCTGTCTCCCAGGAAGCAGAATCGTGACATGGATCTGAGGAGGAACGGAAGACGCCCGAGGCTGAAGCGTAGTAATGCTGTGAAGTACATTGAGTACGATGCCGAGTCGTCGTCTTCGCTGGATAACTCATGGGGGTCTGCTTATACTCGGTCTCTTGACGTGTCACAGCAAAAGAGCTTTCGTATTGAGGGAACTGGCGACGATTTTGAAGTATTATTAAAAAAATTGGGGCTATCGAGCCCGGAAGACACTGGTATTCCGGTGGCGGCTTGGGAGGCCAGGAAGGCTCAGTCTTGTTCGGATCGTCTAACGCTTCCGAAGATGCATCTACTGGACGAGAGCCCAAAGGGAGAGGACGAGATCGACGAGGAGGAAACAGAAGTAAAAGTGCAATTCTGTAAGAGAGATGCTAATTCCGTTAGAACTAGGAATTCTAATTTTGCTCAGAATGAACCTTCCGAGTTAATTAACAGTGGTGGTGGAGGGGAAAGAGGGGGGATTAAGGGTATCCGTCCGCCGGGGCTAAAGCCGCCGCCCAGTAGACGGCTCCCTCTGATGGACAGTTCGTGTTCCACCTGGGATATTATGAAGAGTTTAGCTCCACAAGAGGAAGGGCATAACGTTTTTTCTTCTGAAGATGTTGATGAGGGAGAAAATATTGATCGTCCCGCTGCCAAGGCAGACATCGGAAGGAATATGGTCAGTTTGCGAGAAAGCGTTGTTCTTTTGGAGTCACTTTCTTGTTCCTTCACTACGTCAAACGACGATGATTCTTCGAGCTCCACAACCGAGCCATCCAACATTTCTCCCAACGAGAGAGGTAGGCGCACTATAACGAACTGGGAAAAGGGTCGTCTTCTTGGGAGAGGCTCGTTTGGATCTGTATACGAAGGAATATCTGATGATGGATTCTTTTTCGCTGTTAAAGAAGTTTCATTGCTCGATCAAGACAACCAGGGCAGGCGCCGTGTTTATCAACTTGAGCAGGAGATCGCCCTTCTAAGTCAGTTTGAGCATGAGAACATAGTTCGATATTATGGCACGGATAAGGATGAATCAAAACTCTACATCTTTCTCGAGCTTGTAAGTCAAGGCTCTCTTATGAATCTCTACCAGACTTATAATCTTCGAGACTCCCAAGTCTCTTTTTATACTAGACAGATTTTGAATGGATTGAAATATCTTCATGACCGACATGTAATTCACAGGGATGTCAAGTGTGCAAATATTTTGGTGGATGCAAATGGGTTAGTGAAGCTTGCAGATTTTGGACTGGCAAAGGCAACAAAACTGAATGATGTGAAATCCTGTCAGGGAACTCCATTCTGGATGGCACCCGAGGTTGTTAAAGGCGCCAACCGGGGGTATGGTCTTCCTGCCGATATCTGGAGTCTTGGATGTACTATCTTAGAGATGCTCACCCGTCAGATTCCATACTCCGAATTCGAAAGTATGCAGGCTTTATACAGGATTGGAAAGGGCATTCCTCCTACTATTCGGGACACTCTCTCAAACGATGCCCAAGATTTTATCCTGCAGTGCCTACAAGTTAACCCAGATGATCGTCCCACTGCTGTCCAACTATTACATCATCCATTTGTAAAGAGATCACTCCACACTTCTTCTGGATCAGCCTCGCCATTCAATGGATCTTCTACGCCTTACAATCTCAGCAGAAGAAATTAA 1707 46.22 MHHLPQFLSPRKQNRDMDLRRNGRRPRLKRSNAVKYIEYDAESSSSLDNSWGSAYTRSLDVSQQKSFRIEGTGDDFEVLLKKLGLSSPEDTGIPVAAWEARKAQSCSDRLTLPKMHLLDESPKGEDEIDEEETEVKVQFCKRDANSVRTRNSNFAQNEPSELINSGGGGERGGIKGIRPPGLKPPPSRRLPLMDSSCSTWDIMKSLAPQEEGHNVFSSEDVDEGENIDRPAAKADIGRNMVSLRESVVLLESLSCSFTTSNDDDSSSSTTEPSNISPNERGRRTITNWEKGRLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQDNQGRRRVYQLEQEIALLSQFEHENIVRYYGTDKDESKLYIFLELVSQGSLMNLYQTYNLRDSQVSFYTRQILNGLKYLHDRHVIHRDVKCANILVDANGLVKLADFGLAKATKLNDVKSCQGTPFWMAPEVVKGANRGYGLPADIWSLGCTILEMLTRQIPYSEFESMQALYRIGKGIPPTIRDTLSNDAQDFILQCLQVNPDDRPTAVQLLHHPFVKRSLHTSSGSASPFNGSSTPYNLSRRN 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83891178 83895279 + Bma003523.1 Bma01g02638 77155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02638 568 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 171 551 - -
Bma01g02638 568 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 171 551 - -
Bma01g02638 568 MobiDBLite consensus disorder prediction 1 27 - -
Bma01g02638 568 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 24 125 - -
Bma01g02638 568 SUPERFAMILY Protein kinase-like (PK-like) 285 545 IPR011009 -
Bma01g02638 568 Gene3D Transferase(Phosphotransferase) domain 1 285 559 - -
Bma01g02638 568 Pfam Protein kinase domain 289 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02638 568 MobiDBLite consensus disorder prediction 257 282 - -
Bma01g02638 568 SMART serkin_6 288 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02638 568 ProSitePatterns Serine/Threonine protein kinases active-site signature. 407 419 IPR008271 GO:0004672|GO:0006468
Bma01g02638 568 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Bma01g02638 568 ProSiteProfiles Protein kinase domain profile. 288 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02638 568 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 24 125 - -
Bma01g02638 568 MobiDBLite consensus disorder prediction 546 568 - -
Bma01g02638 568 MobiDBLite consensus disorder prediction 157 188 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02638 Bma02g00241 CCT
Bma01g02638 Bma01g00841 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02638 Bma-Chr1:83891178 Bma04g01702 Bma-Chr4:53259009 8.80E-124 dispersed
Bma04g00760 Bma-Chr4:8176028 Bma01g02638 Bma-Chr1:83891178 5.86E-23 dispersed
Bma05g01090 Bma-Chr5:49624458 Bma01g02638 Bma-Chr1:83891178 4.02E-28 dispersed
Bma03g01021 Bma-Chr3:11339613 Bma01g02638 Bma-Chr1:83891178 1.11E-78 transposed
Bma08g00295 Bma-Chr8:4102153 Bma01g02638 Bma-Chr1:83891178 9.86E-45 transposed
Bma08g00406 Bma-Chr8:10093395 Bma01g02638 Bma-Chr1:83891178 2.28E-07 transposed
Bma09g00311 Bma-Chr9:26141328 Bma01g02638 Bma-Chr1:83891178 2.37E-72 transposed
Bma15g00785 Bma-Chr15:16763102 Bma01g02638 Bma-Chr1:83891178 8.79E-80 transposed
Bma01g00841 Bma-Chr1:7951419 Bma01g02638 Bma-Chr1:83891178 2.67E-146 wgd
Bma01g02638 Bma-Chr1:83891178 Bma02g00241 Bma-Chr2:2518061 0 wgd
Bma01g02638 Bma-Chr1:83891178 Bma05g01388 Bma-Chr5:53297476 4.84E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66314 PF00069 Pkinase 1.60E-68 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02638 K13414 - pop:7460930 624.394