Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02646 AGAGAGATGGAGGGTTCAATGCTAACCAAGCTGAAGCCTTACATAGCTATAGTTTCGGTCCAGTTCGGCTACGCTGGGATGAACATCATTACCATGCTTTCATTCAAGCAAGGTATGAGCCATTACATACTTGCCGTTTACCGCCACGCTATTGCCACCCTCGTGATCGCTCCTTTTGCTATCTTCCTTGAAAGGAAGACAAGACCAAAGATGACTTTACCTGTCTTTTTAAGGATAATGCTTCTCGCTTTCCTCGAGCCTGTACTTGATCAAAACCTGTACTACGTGGGAATGAAGTATACCTCAGCGACCTTTGCATCAGCCATTGTCAATGTCCTCCCTGCAATTACCTTCATCATGGCAATCATTTTCAGGTTTGACTCCCCAATCACAATCACACTACTTGAGATGTATACAAATTCACGAGATATGATGAAATATTTTAGGCTGGAGAGTGTGAACTTGAAGAAGATAGAGAGCATAGCAAAGATCAGCGGAACTGCAGTGACAGTGACCGGAGCCATGATAATGATGATGTACAAAGGGCCTCTCGTCGACATCATACACGGGCATGGGGGTGACGGAATCTCCCCTGCCGCCTCCGGTCAATCTAACTCAGACCAGCATTGGGTCACTGGCACTCTCATGCTCTTGTGCAGTTGCTGTGGCTGGTCTGCATTCTTCATTTTGCAATCATTTACGTTGGAGAAGTACCCGGCCGAGCTATCGCTGAGCGGATGGATTTGCCTGATGGGGATGGCCGAAGGGGCGGCGGTTTCACTCGTGATGGAACGAGACATGAGCGTCTGGTTTCTCGGCTGGGATTCGAGACTTGCTGCTGCTGCTTACACTGGAGTGGTCTGCTCAGGCATTGCATACTACATACAGGGAGTGGTAATCAAAGAGAAAGGCCCAGTCTTTGTGGCCTCTTTCAGCCCTCTGATCATGATCATCACAGCTGCTCTTGGCTCCATCATCTTGGCCGAGAAGATCCATCTTGGAAGCGTAATTGGAGCCATTCTGATAGTCATGGGGCTGTACACAGTAGTGTGGGGCAAAAGCAAAGACCGGCAAATCAGCGGCAACGAGAGTTTAGAGGGCCCGAAGAGTGGCGCGGAGTTGCCCATCACTCGCACCATCAAATCTGCCTTTCCTGCTGCTCACTGCAATCACGTCGACGCCATTTCAATACCTGCTATCGCCTCTCGCTGA 1212 49.34 REMEGSMLTKLKPYIAIVSVQFGYAGMNIITMLSFKQGMSHYILAVYRHAIATLVIAPFAIFLERKTRPKMTLPVFLRIMLLAFLEPVLDQNLYYVGMKYTSATFASAIVNVLPAITFIMAIIFRFDSPITITLLEMYTNSRDMMKYFRLESVNLKKIESIAKISGTAVTVTGAMIMMMYKGPLVDIIHGHGGDGISPAASGQSNSDQHWVTGTLMLLCSCCGWSAFFILQSFTLEKYPAELSLSGWICLMGMAEGAAVSLVMERDMSVWFLGWDSRLAAAAYTGVVCSGIAYYIQGVVIKEKGPVFVASFSPLIMIITAALGSIILAEKIHLGSVIGAILIVMGLYTVVWGKSKDRQISGNESLEGPKSGAELPITRTIKSAFPAAHCNHVDAISIPAIASR 403
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 83962891 83970206 + Bma003532.1 Bma01g02646 77163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02646 403 PANTHER WAT1-RELATED PROTEIN 9 127 - -
Bma01g02646 403 PANTHER WAT1-RELATED PROTEIN 147 364 - -
Bma01g02646 403 Pfam EamA-like transporter family 16 125 IPR000620 GO:0016020|GO:0016021
Bma01g02646 403 Pfam EamA-like transporter family 213 350 IPR000620 GO:0016020|GO:0016021
Bma01g02646 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 274 355 - -
Bma01g02646 403 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 124 - -
Bma01g02646 403 PANTHER WAT1-RELATED PROTEIN 147 364 IPR030184 GO:0016021|GO:0022857
Bma01g02646 403 PANTHER WAT1-RELATED PROTEIN 9 127 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02646 Bma-Chr1:83962891 Bma08g00989 Bma-Chr8:48983945 2.15E-114 dispersed
Bma15g00806 Bma-Chr15:18915278 Bma01g02646 Bma-Chr1:83962891 2.17E-60 dispersed
Bma03g00405 Bma-Chr3:3065559 Bma01g02646 Bma-Chr1:83962891 1.41E-121 transposed
Bma04g01450 Bma-Chr4:49702076 Bma01g02646 Bma-Chr1:83962891 3.19E-126 transposed
Bma01g01426 Bma-Chr1:24211279 Bma01g02646 Bma-Chr1:83962891 1.09E-22 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02646 - - peu:105127817 481.87