Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma01g02679 | ATGGGAATGGGAAATTTTCTAAATCAAGCCACTTTTAAAGGAAAAAGATTATGCACAAATGCTCTTTTGGTTACTATTAATTATTTGCTGGGGAATCTGGGCAAGAAATTTCAGGATACGGTTGGCATAGTTGATCTTGGGGGTGGATCAGTTCAAATGGCATATGCTATTGCGGAGAAGAATGCAGCATCAAGAATATCAGATGAAGAGAATACATATGTAAAACAAATGAATCTAAAGGGAACGAAATACAACCTCTATGTTCACAGTTACTTGCATTATGGCTTGCTATCTGCTAGAGCAGAGATTTTAAAAGTCTCAGGAGGCTCAGAGAATCCATGTATCTTAGCTGGCTATGAAGGTTCTTACAAATATGGGGGAGAGGAATTTAGAGTATTGGCTGATCCATCTGGCTCCAACTTGGAGGGATGCAAACGATTAGCGATCAAGGCTCTCAGAGCCAATGAATCAACATGTAATTACATGAAGTGCACGTTTGGTGGTGTATGGAATGGCGGAGGGGGATGGCCAGAAGAATTTGTTCGTCGCTTCATTTTTCTTCGACAGAGCTGCTGA | 576 | 40.8 | MGMGNFLNQATFKGKRLCTNALLVTINYLLGNLGKKFQDTVGIVDLGGGSVQMAYAIAEKNAASRISDEENTYVKQMNLKGTKYNLYVHSYLHYGLLSARAEILKVSGGSENPCILAGYEGSYKYGGEEFRVLADPSGSNLEGCKRLAIKALRANESTCNYMKCTFGGVWNGGGGWPEEFVRRFIFLRQSC | 191 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 84279046 | 84282972 | + | Bma003564.1 | Bma01g02679 | 77196 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma01g02679 | 191 | PANTHER | APYRASE 2 | 23 | 188 | - | - | |
| Bma01g02679 | 191 | Pfam | GDA1/CD39 (nucleoside phosphatase) family | 24 | 176 | IPR000407 | GO:0016787 | |
| Bma01g02679 | 191 | Gene3D | Exopolyphosphatase. Domain 2 | 23 | 188 | - | - | |
| Bma01g02679 | 191 | PANTHER | ADENOSINE/GUANOSINE DIPHOSPHATASE | 23 | 188 | IPR000407 | GO:0016787 |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g02679 | Bma-Chr1:84279046 | Bma06g00710 | Bma-Chr6:37524215 | 3.01E-11 | dispersed | |
| Bma01g02679 | Bma-Chr1:84279046 | Bma05g01350 | Bma-Chr5:53045068 | 1.03E-89 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma01g02679 | K14641 | - | peu:105120087 | 223.016 |