Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02697 ATGGGTCTGGAAATTACGGAGCCAAACACCTGCATCAGAGGCTGCTGCTCAAGCCGATCCATCCCTCTTCATCTTCCGCCTTCCTCTTATACTCTCCTCTCTCCCATCGCCAGAGGCGCTGAGAGCGTCGTCTTCGAAGGGAGATTGAATGGGAAGAAATTTGCTGTGAAAAAACCTATTCTCTCTACTTCAGAAGACCTGGACAAGTTCCACAAGACGTTGCAGTTGCTATGTAAACTGGATCACCCGGGAATAGCGACATTGGTAGCGGCGCACGCGAGACCGCCAAATTACTTATTTTTCTTTGAGTTCTATGAAGCTCCAAACCTGTCTGAGAAATTACATGTTGAGGAGTGGAATCCAAGCGCCGATCAAGTCCTCAAAATCACCCTTGAGTTAGCTAGGTCTTTGCAATATCTACATAAGTTGGGGATTGTACATCGAGATGTCAAACCAGCAAATATTCTTCTTGACAAAGGTTTGTCTCCACGCTTAGCAGATTTTGGTTTGGCAGAATACAAGAAGTCTGTTGAGAATTGGAAGTCATCAGGCAAGCCAACTGGTGGTTTTTACAAGAAAAACATGGTTGGTACCCTAATATATATGGCACCTGAAATATTGAAGAAAGAAGTGCATACAGAAAAATCTGACGTGTACAGTTTTGGCATATCAATCAATGAACTTCTTACTGGCGTTATTCCCTATACCGATCTTCGTGCAGAAGCGCAGGCACATACTGTACTAGAAATGAACTATACTGAACAACAACTTACATCTGCTGTGGTTTGTGATCGGCTAAGACCTGTTCTTGCGAGTCCTAAGTTTGGTGCTCCATCATGTTTACTGACACTTATTCAAAGGTGCTGGGATGATAATCCGGAAATTAGACCATCTTTTGATGATATTATTATAGAGCTAAATTTTTTGGCAGAACATAAGGAATTGAGTTTCGTTGAACCTTGCGATTCACATTGTACTCAACTTGATGATGATATAAAGAAAATTCAAAGTTTTCAAGAGAGTATAAACTGGTCTGATCAGGGAGCATATTTTTCCGAGAAAATTTCAAGTACAGATAAGTCTACCATGAAAGTGTGGACTGACTCCTCGACTGATCCTTTGGCCTATTGTCCAATACTTTCTTGGGGATCCTTCGCCACCTGTGGGAGGAGGGAGACCATGGAGGACACACATTTTCTTAACCCCCGTTTGTGCAGCGAAGAAGATGATCATGTTGCAAGTGATACGAAGGAGAGGGAGCGCGTAATTGGTCTTGGTGGACAAGTCAAATGGCAGTTTGATACATGGAGGGTTGGTCCTGCTGCTCTCCAGGTTACTCGTTCCATTGGTGACGACGATCTAAAACCCTATGTGACGGCAGAGCCTGAGATCACTGAGACAGTTTTGTCAGCAGAGGACGAATTCCTTGTTATGGCAAGTGATGGACTATGGGATGTTATTAGCAATGCGGTGGTTGTGAGCATAATCAGGGACACTGTCAAGGAGCCAGGAATGTGCTCCAAGCGATTGGCAATGGAGGCCGTAGAGCGTGGGAGTAAAGATAATGTCACAGTAATTGTCGTATTCCTGCGTCCCGTTTCGACTGCGGAGAGAATATATTGA 1623 44.05 MGLEITEPNTCIRGCCSSRSIPLHLPPSSYTLLSPIARGAESVVFEGRLNGKKFAVKKPILSTSEDLDKFHKTLQLLCKLDHPGIATLVAAHARPPNYLFFFEFYEAPNLSEKLHVEEWNPSADQVLKITLELARSLQYLHKLGIVHRDVKPANILLDKGLSPRLADFGLAEYKKSVENWKSSGKPTGGFYKKNMVGTLIYMAPEILKKEVHTEKSDVYSFGISINELLTGVIPYTDLRAEAQAHTVLEMNYTEQQLTSAVVCDRLRPVLASPKFGAPSCLLTLIQRCWDDNPEIRPSFDDIIIELNFLAEHKELSFVEPCDSHCTQLDDDIKKIQSFQESINWSDQGAYFSEKISSTDKSTMKVWTDSSTDPLAYCPILSWGSFATCGRRETMEDTHFLNPRLCSEEDDHVASDTKERERVIGLGGQVKWQFDTWRVGPAALQVTRSIGDDDLKPYVTAEPEITETVLSAEDEFLVMASDGLWDVISNAVVVSIIRDTVKEPGMCSKRLAMEAVERGSKDNVTVIVVFLRPVSTAERIY 540
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84412530 84418671 - Bma003579.1 Bma01g02697 77214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02697 540 PANTHER PROTEIN PHOSPHATASE 2C 1 407 IPR015655 GO:0004722|GO:0006470
Bma01g02697 540 ProSiteProfiles Protein kinase domain profile. 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02697 540 Pfam Protein phosphatase 2C 410 523 IPR001932 -
Bma01g02697 540 SUPERFAMILY PP2C-like 378 532 IPR036457 -
Bma01g02697 540 SMART serkin_6 30 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02697 540 ProSitePatterns Serine/Threonine protein kinases active-site signature. 145 157 IPR008271 GO:0004672|GO:0006468
Bma01g02697 540 Gene3D - 403 539 IPR036457 -
Bma01g02697 540 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Bma01g02697 540 CDD PP2Cc 410 530 IPR001932 -
Bma01g02697 540 ProSiteProfiles PPM-type phosphatase domain profile. 200 530 IPR001932 -
Bma01g02697 540 SMART PP2C_4 208 528 IPR001932 -
Bma01g02697 540 Pfam Protein kinase domain 30 303 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma01g02697 540 PANTHER PROTEIN PHOSPHATASE 2C 409 540 IPR015655 GO:0004722|GO:0006470
Bma01g02697 540 PANTHER - 1 407 - -
Bma01g02697 540 Gene3D Transferase(Phosphotransferase) domain 1 21 340 - -
Bma01g02697 540 PANTHER - 409 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02697 Bma-Chr1:84412530 Bma07g00378 Bma-Chr7:4688446 3.37E-35 dispersed
Bma09g00628 Bma-Chr9:43618157 Bma01g02697 Bma-Chr1:84412530 8.42E-08 dispersed
Bma01g02697 Bma-Chr1:84412530 Bma06g00081 Bma-Chr6:1282980 4.93E-34 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66317 PF00069 Pkinase 1.60E-43 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02697 - - qsu:111986984 629.017