Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma01g02702 ATGGGTGCAGCTTTAGCCGATGGAAATAACCGAAAAGCTCTGGGAGATATCGGAAATCTTGTAACAGTTCGAGGAATGGACCCAAAGCCTAATCGTCCCATCACAAGAAGATTCTGCGCCCAACTGCTCGCTAATGCTCAAGCTGCTGCAGCTGCTGAAAACAATAATAAGAAACAACAAAAGCCAGTCACCGTGGTCGAAATAACCCCAGATTCAGACTTAGAAGTGAGTAAATCGGAGAGTAAAAAGGAAGGAGAAGAAGTCTCGTCCAAGAAGAAACAACAAAAGCCAGTCACCATGGTCGAAATAAGCCCAGACTCAGACTCAGAAGTGAGTAAATCGGAGAGTAAAAAGGAAGGAGAAGAAGTCTCGTCCAAGAAGAAACAAAAGTCTACGCGTACTCTGACTTCAGTCCTCACAGCTAGAAGCAAGGCTGCTTGTGGTGTGACAAACAAACCCAAGGAAGAGAACTGTGATATAGATTCAGCTGATGCAGGAAACGAGTTAGCAGTAGTGGAATATATGGACGACATGTACAAGTTCTACAAGCTTGTTGAGAATGAAAGCAGGCCTCGTGACTACATGGATTCCCAGCCGGAGATTAATTCTCAAATGAGATCTATTCTGGTGGATTGGCTGGTTGATGTTCATAACAGATTTGAACTTTCCCCCGAGACATTCTACCTCACAATCAACATCATCGATCGATATCTCGCGGCCAAGAAGGTGATGAGGAAAGAACTCCAGTTGGTTGGTATAAGTGCAATGCTGATGGCCTCAAAATACGAGGAAATCTGGGCTCCCGAGGTGAATGACTTTGTCTGTCTTTCAGAGAGAGCTTACTCCCATGAACAGATCTTGAAGATGGAGAAACTAATTCTAGGAAAACTTGAATGGACGTTGACAGTTCCTACGCCTTATGTGTTTCTTGTTCGATTCATCAAGGCCTCTAAAGATGCCGATTCAGAAATGGAGAACATGGTTTATTTTCTAGCTGAACTGGGAATGATGCATTATTCAGCTGTGATAATGTACAGCCCATCAATGATTGCTGCCTCAGCAGTCTACGCTGCTCGATGTACTCTGAACAAGGAATCTGCTTGGACTGAAACTCTGAAATATCATTCGGGTTTTTCGGAATCACAGCTCATCGATTGTGCGAAATTGTTGGTGTGCTTCCATGCAACGACGAAGGAGAGTCGACTGCAGGTTGTGAGGAAGAAGTACTCTGCTTCAGACAGAGGAGCTGTGGCTCTGCTTCTACCGGCCGAAAAATTGGTGTCTGCTGCGTTGCAGCAAGACCCACGACGACAAAATTGA 1320 44.85 MGAALADGNNRKALGDIGNLVTVRGMDPKPNRPITRRFCAQLLANAQAAAAAENNNKKQQKPVTVVEITPDSDLEVSKSESKKEGEEVSSKKKQQKPVTMVEISPDSDSEVSKSESKKEGEEVSSKKKQKSTRTLTSVLTARSKAACGVTNKPKEENCDIDSADAGNELAVVEYMDDMYKFYKLVENESRPRDYMDSQPEINSQMRSILVDWLVDVHNRFELSPETFYLTINIIDRYLAAKKVMRKELQLVGISAMLMASKYEEIWAPEVNDFVCLSERAYSHEQILKMEKLILGKLEWTLTVPTPYVFLVRFIKASKDADSEMENMVYFLAELGMMHYSAVIMYSPSMIAASAVYAARCTLNKESAWTETLKYHSGFSESQLIDCAKLLVCFHATTKESRLQVVRKKYSASDRGAVALLLPAEKLVSAALQQDPRRQN 439
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 84443833 84445726 - Bma003584.2 Bma01g02702 77219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma01g02702 439 MobiDBLite consensus disorder prediction 108 129 - -
Bma01g02702 439 SUPERFAMILY Cyclin-like 166 301 IPR036915 -
Bma01g02702 439 CDD CYCLIN 302 391 IPR013763 -
Bma01g02702 439 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Bma01g02702 439 SUPERFAMILY Cyclin-like 303 424 IPR036915 -
Bma01g02702 439 MobiDBLite consensus disorder prediction 46 136 - -
Bma01g02702 439 PANTHER G2/MITOTIC-SPECIFIC CYCLIN S13-6 6 430 - -
Bma01g02702 439 MobiDBLite consensus disorder prediction 73 93 - -
Bma01g02702 439 CDD CYCLIN 205 294 IPR013763 -
Bma01g02702 439 PIRSF Cyclin_A_B_D_E 2 435 IPR039361 -
Bma01g02702 439 Gene3D - 177 418 - -
Bma01g02702 439 PANTHER CYCLINS 6 430 IPR039361 -
Bma01g02702 439 Pfam Cyclin, C-terminal domain 304 421 IPR004367 -
Bma01g02702 439 Gene3D - 191 302 - -
Bma01g02702 439 MobiDBLite consensus disorder prediction 48 66 - -
Bma01g02702 439 Pfam Cyclin, N-terminal domain 177 301 IPR006671 -
Bma01g02702 439 SMART cyclin_7 211 295 IPR013763 -
Bma01g02702 439 SMART cyclin_7 308 392 IPR013763 -
Bma01g02702 439 SMART Cyclin_C_2 304 423 IPR004367 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02702 Bma02g00209 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00703 Bma-Chr1:6423557 Bma01g02702 Bma-Chr1:84443833 6.11E-88 dispersed
Bma01g02408 Bma-Chr1:81648498 Bma01g02702 Bma-Chr1:84443833 4.90E-78 dispersed
Bma01g02702 Bma-Chr1:84443833 Bma11g00315 Bma-Chr11:2966020 5.92E-119 dispersed
Bma07g00425 Bma-Chr7:5201650 Bma01g02702 Bma-Chr1:84443833 4.06E-06 dispersed
Bma15g00922 Bma-Chr15:33222594 Bma01g02702 Bma-Chr1:84443833 1.48E-12 transposed
Bma01g02702 Bma-Chr1:84443833 Bma05g01330 Bma-Chr5:52864423 5.51E-175 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma01g02702 K21777 - csv:101217210 520.39