Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00009 GTGTTCGATTGCTGCTTTACAACCAATGTTTTGGATGACGATGAATATAAAGTTTACATAGGAGGTATAGCTAATCAAGTGAGGGGGCATCTCCCTGATGCTTCATTCATGGTGTTTAACTTTCGAGAAGGAGAGAAACAAAGCCTGATTTCTAAGATATTGTCTGAGTATGACATGACTGTGATGGACTACCCTCGCCATTACGAGGGTTGTCCTCTTCTTACAATGGAGATGATCCATCACTTCTTGAGATCCAGTGAAAGCTGGCTTTCCCTTGGCCAACAAAATGTGCTCTTGATGCATTGTGAGCGAGGCGGGTGGCCCGTCTTGGCTTTTATGTTGGCTGCTCTCTTAATCTATAGGAAGCAGTACGTTGGTGAACAAAAAACTTTGGATATGATTTACAAACAGGCACCTCAAGAGCATTTGCTTCTAATGTCTCCCCTCAACCCCATGCCATCTCAGTTGAGGTACCTCCAATATATCTTGAGAAGAAATGTTGCCTCAGAATGGCCTCCGCTGGATAGAGCCCTTACATTGGACTGCATCATCATTAGATTCATTCCTAATATGGATGGAGAAGGTGGTTGTCGTCCTATATTTAGAATATATGGACAGGATCCCTTTATGGCTGCTGATAGAACTCCCAAAGTTCTTTTCTCAACTCCAAAAAGGAGCAAATTCGTTCGACACCACAAGCAGGAAGATTGCGAGCTAGTCAAAATTGATATTCACTGCCATATACAAGGTGATGTAGTCCTTGAATGTATTAGTTTAGACAATGATTTGGAACGTGAAGAGATAATGTTCCGCATCATGTTCAATAATGCTTTTATAAGGTCGAATATTTTGATGTTTAGTCGGGATGACCTTGATATTTTATGGAATGCTAAGGATCAGTTCCCCAAGGATTTCAGAGCAAAGGTTCTTTTCTCGGAGATAGATGCTGAGACTTCTCTTATTTCAGTTGATTTGCCGAATATTGAGGAGAAAGAGGGCCTCCCAATCGAAGCATTTAATAAAGTTCAAGAGATATTTAGCAACATGAATTGGATAGATCCACAAACACAGCAAATCTCATCCCCAAAAACCCCTAAAGGAAACATGGTTGAAGAAACAGGAAACTTTGCAGGTCCTGAGGAACTAAAAGCAGAACCAAAATCAGCTGAGGATGACTTACAAGTCTGCTCACTCAATGATCAGAAAGACCAATCTATACCATGTTCTAAACCATCTTCGGCTGCAGACTCAGAGATCCTCAAATCTAATATCTTATCTTTTTCTGCACCAGTTTCTTATAGTAATTCCTTGCAAGGGTCACCTAAAGCGGTATTGCCATCTTCTTCTATCTCGCCATCTCTAACTAATGTATTTAAGCCTTTGGAGCCGATAATTGTTCGTATTCCGCCATGTCCACTGCTTACTCCTCCCCAAGAACTATTTCAGCCTAAACCTTCAGATGCAACGAAACCTCCAGTGAGATTAGCTCCCATCCCCTCTCCCCCTCCCTCCTCCACCACCTTTAGCCTGGTCATTTTCATCTTCACCTGTCAAACAAGCAAGTCTTCCACTCCCTCCCCCTCCACCTCCACCTCCACCTTCTCCCCCCCACTTTCTTCTGACATAATCACTCTCCCACCTCCTGCTTTTTCTACGATATTATCATCTAGATTGAGTAACTCTTTATCAACGCCTCCTCCTCCTCCACCCCCTAGTGTACCTTCCGGACAATTTTCTGTTTCTTCAAGGATGCCTAGAGTGAGTAACTCTCTAGCAACGCCTTCTCCTCCTCCTCCTCCTCCACCTCCTCCACCCCTTAGTGTAACTTCAGGACCATTTTCTGTGTCTTCAAGGATGCCTAGTGTAAGTAACTCTCTAGCAACGCCTTCTCCTCCTCCACCCCCAAGTGTACCTTCAGGACCATTTTCTGTTTCTTCAAGGATGCCTAGTGTGAGTAACTCTCTAGCAACGCCTCCTCCTCCTCCTCCACCCCCTAGTGTACCTTCAGGACCATTTTCTGTATCTTCAAGGATGCCAAGTGTGAGTAACTCTCTAGCAACACCTCCCCCTCCTCCTCTCCCACCTTCTAGTGTACCTTCAGGAGCATTTTCTGTTTCTTCTAGGCTGCCTATAAAGAATTTGGCAGATAAGTCTGTACCTCTTTCCCCGCCGCCACCACCTCCTCCTCCTAATCTCAATTCAAAAGAATCAGCATCAAATAATCATGCACCGACATCTCCTATCCCACCACCTCCAGCTCCTTTGTCCAATGGTTTAACAAAAGCCGGTGATGCATCTTCAAATTCTAGAGCTACTAATAGCAAAATACCTGCAATTCCTGGGCCCCCTTCTAGTCTTTCATTCAATTCAAAAGGTCGAGCCCCACCACGTACAGGTGCCAAAAATCTGGCTCAAGGTAAAAAATCAAACCTGAAACCCTATCACTGGCTCAAGTTAACAAGGGCTGTGCAAGGAAGTTTATGGGCAGAGGCACAAAAAACTGATGAAGTTTCTAAGCCTCCAGAGTTTGATATGTCAGAACTTGAGTCTCTTTTTGCTGCTACTGCTCCAAATTCAGATAATGGGAGAACTGGAGACAAGTCAAAACGCCGTGCATCAGCAAATAAAGCAGACAAAGTGCAGTTGATTGAGCTGAGGCGGGCAAATAATTGTGAGATCATGCTTACCAAGGTTAAGATTCCATTGCCTGATTTGATGAGTTCAGTGCTATCCTTGGATGAAGCAACATTGGATGCCGATCAAATCGAGAATCTCATCAAGTTTTGTCCGACAAAGGAAGAGATGGAGCTACTCAAGGGTTATGGTGGAGATAAAGAAAGTTTGGGAAAATGCAAACAGTTCTTAGAATTGATGAAAATAACACGTATAGAGCCCAAGCTAAGAGTATTTTCTTTCAAGATTCAGTTTAGATCCCAGATCAAGAGTTCAGTGAAGTTGAAAAAAATATTGCAAACCATTCTTTCTTTGGCAAATGCTCTGAATCATGGAACCGCGATGGGTGATTCGGCTGTCAGATTTCGTTTGGATAGTCTTTTTAAACTTACTGACACTCGAGCCCGGAACAACAGAATGACTCTTATGCATTATCTCTGTAAGGTACTTGCCGAGAAATTGCCTGAACTTCTAGATTTTCCGAAAGATCTAAAGAATTTAGAGGCGTCAACGAAGATACAATTGATGTATTTAGTGGAGGAAATGCAAGCCATTAGTAAGGGGATTGAGAAGGTTGTACAGGAATTAACATTTTCAGATAATGATGGTCCAGTTTCAGAAAATTTTTCCAAGACTGTAAAGGGTTTTCTTAATGATGACAAGGCCGAAGTGAGGTCTCTGGCTTTGCTCTATTCTAACGTGGGAAGAAATGCAGATGCATTGGCTTTCTATTTTGGTGAAGATCCAGCTCGCTGTCCATTTGAACAAGTTGTATCCACGTTGCTCAACTTTGTTAAAATGTTCAGTCGAGCACACGAGGAAAACTGCAAGCAGATAGAATATGAAAAGAGGAAAGCACAGAAGGAAGCAAACGAGAAGATGAAGATAGGTTCCCCGAGAAAAGTCGACTCGCTTTCTTCGCCGATGAAGAATCGAGGCATTACATGA 3621 43.0 VFDCCFTTNVLDDDEYKVYIGGIANQVRGHLPDASFMVFNFREGEKQSLISKILSEYDMTVMDYPRHYEGCPLLTMEMIHHFLRSSESWLSLGQQNVLLMHCERGGWPVLAFMLAALLIYRKQYVGEQKTLDMIYKQAPQEHLLLMSPLNPMPSQLRYLQYILRRNVASEWPPLDRALTLDCIIIRFIPNMDGEGGCRPIFRIYGQDPFMAADRTPKVLFSTPKRSKFVRHHKQEDCELVKIDIHCHIQGDVVLECISLDNDLEREEIMFRIMFNNAFIRSNILMFSRDDLDILWNAKDQFPKDFRAKVLFSEIDAETSLISVDLPNIEEKEGLPIEAFNKVQEIFSNMNWIDPQTQQISSPKTPKGNMVEETGNFAGPEELKAEPKSAEDDLQVCSLNDQKDQSIPCSKPSSAADSEILKSNILSFSAPVSYSNSLQGSPKAVLPSSSISPSLTNVFKPLEPIIVRIPPCPLLTPPQELFQPKPSDATKPPVRLAPIPSPPPSSTTFSLVIFIFTCQTSKSSTPSPSTSTSTFSPPLSSDIITLPPPAFSTILSSRLSNSLSTPPPPPPPSVPSGQFSVSSRMPRVSNSLATPSPPPPPPPPPPLSVTSGPFSVSSRMPSVSNSLATPSPPPPPSVPSGPFSVSSRMPSVSNSLATPPPPPPPPSVPSGPFSVSSRMPSVSNSLATPPPPPLPPSSVPSGAFSVSSRLPIKNLADKSVPLSPPPPPPPPNLNSKESASNNHAPTSPIPPPPAPLSNGLTKAGDASSNSRATNSKIPAIPGPPSSLSFNSKGRAPPRTGAKNLAQGKKSNLKPYHWLKLTRAVQGSLWAEAQKTDEVSKPPEFDMSELESLFAATAPNSDNGRTGDKSKRRASANKADKVQLIELRRANNCEIMLTKVKIPLPDLMSSVLSLDEATLDADQIENLIKFCPTKEEMELLKGYGGDKESLGKCKQFLELMKITRIEPKLRVFSFKIQFRSQIKSSVKLKKILQTILSLANALNHGTAMGDSAVRFRLDSLFKLTDTRARNNRMTLMHYLCKVLAEKLPELLDFPKDLKNLEASTKIQLMYLVEEMQAISKGIEKVVQELTFSDNDGPVSENFSKTVKGFLNDDKAEVRSLALLYSNVGRNADALAFYFGEDPARCPFEQVVSTLLNFVKMFSRAHEENCKQIEYEKRKAQKEANEKMKIGSPRKVDSLSSPMKNRGIT 1206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 210466 216500 + Bma014467.1 Bma02g00009 77259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00009 1206 MobiDBLite consensus disorder prediction 684 698 - -
Bma02g00009 1206 Gene3D - 177 316 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 591 609 - -
Bma02g00009 1206 PANTHER FORMIN-J 1 1189 - -
Bma02g00009 1206 SUPERFAMILY Formin homology 2 domain (FH2 domain) 814 1179 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 557 809 - -
Bma02g00009 1206 Coils Coil 1160 1180 - -
Bma02g00009 1206 Pfam Formin Homology 2 Domain 806 1160 IPR015425 -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 853 874 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 576 590 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 1178 1206 - -
Bma02g00009 1206 PRINTS Proline rich extensin signature 469 485 - -
Bma02g00009 1206 PRINTS Proline rich extensin signature 594 619 - -
Bma02g00009 1206 PRINTS Proline rich extensin signature 490 502 - -
Bma02g00009 1206 PRINTS Proline rich extensin signature 518 539 - -
Bma02g00009 1206 PRINTS Proline rich extensin signature 557 574 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 520 540 - -
Bma02g00009 1206 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 50 161 IPR029021 -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 610 625 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 477 503 - -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 760 792 - -
Bma02g00009 1206 Pfam C2 domain of PTEN tumour-suppressor protein 176 313 IPR014020 -
Bma02g00009 1206 Gene3D Formin, FH2 domain 820 1192 IPR042201 -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 626 640 - -
Bma02g00009 1206 Gene3D Protein tyrosine phosphatase superfamily 2 176 IPR029021 -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 719 733 - -
Bma02g00009 1206 ProSiteProfiles Formin homology-2 (FH2) domain profile. 801 1185 IPR015425 -
Bma02g00009 1206 SMART it6_source 593 1201 IPR015425 -
Bma02g00009 1206 SMART PTEN_C2_2 173 313 IPR014020 -
Bma02g00009 1206 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 177 314 IPR035892 -
Bma02g00009 1206 MobiDBLite consensus disorder prediction 654 670 - -
Bma02g00009 1206 ProSiteProfiles C2 tensin-type domain profile. 175 314 IPR014020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00009 Bma-Chr2:210466 Bma06g00166 Bma-Chr6:2113391 9.63E-144 dispersed
Bma15g00872 Bma-Chr15:25723058 Bma02g00009 Bma-Chr2:210466 8.23E-07 dispersed
Bma02g00008 Bma-Chr2:196173 Bma02g00009 Bma-Chr2:210466 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00009 - - mnt:21396398 1275.77