Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00026 ATCCCATATATAGGAATCCCACGACTTCCATCGCCCTTCACTTCCCACCAAACTCCATCTCTGCTCTGCAACATGTCATCCAGTATCGTTGAGGATTTTATCCACGTCTTCTCCGATGGGACTGTCTCCCGTTTTGCGCCGGAGATTGCGCCTGCCTCCGTGGAGTCGGGGAGAGGATATAAGTCCAAGGACGTCGTCATTGATTCATCGAAAGCTATCACCGGACGGGTATTCCTTCCTGATACTCCGGCAGGGTCGTCTTGTTCTCTAATTCCGATCGTGGTTTATTTCCACGGCGGAGGCTTTTGCATCGGCTCGACTACGTGGATTGGCTACCATCGTTTTCTCGGAGACTTGTCCTTCCTCTCTCGCTCCATCGTTCTCTCCATAGACTACCGTTTAGCTCCTGAAAATCGCCTTCCCACCGCTTACGAAGACTGCTATGCTTCTCTTGAATGGCTGAGCCGCCATGCTGCTTCTGAACCATGGCTTTCCCAAGCTGACATTTCCCGGGTGTTCCTCTCCGGCGATAGCGCGGGAGGAAATATCGCGCACCAAGTCGCCGTCAAAGCTCTTCAGTGCAAGCTCCTCTCCATAAATATAGAAGGACTGATGCTGATACATCCATATTTCGGAAGCGAGAAGAGGACCAAGAAAGAGGAAGACGCTGAGAAGGCGTTTAACGTAGCCATGAACGACATGTTTTGGAAGCTGAGTATACCAGAAGGATCAGACAGAGACTATTACGGGTGTAACTTCGAGAAAGACGAACAACTTCGGAAAATAGAATGGAATGCGTTTCCAAAAGTGGTGGTGTTCGTTGCTGGGTTGGATTTCCTGAAGGAAAGAGGAGTTTTATACGCAGAATACATGGAGAAGAAAATGGGGGAGAAGAAGGTGAAGGTGGTAGAGGCGGAGGAAGAGGAACACGTGTTCCACGTGTTTAATCCAGAATCTGAAGCCACCCGAACTCTGCAACAGCAGATGAAGGATTTCATGAAGAAGACGGATTAA 1014 49.41 IPYIGIPRLPSPFTSHQTPSLLCNMSSSIVEDFIHVFSDGTVSRFAPEIAPASVESGRGYKSKDVVIDSSKAITGRVFLPDTPAGSSCSLIPIVVYFHGGGFCIGSTTWIGYHRFLGDLSFLSRSIVLSIDYRLAPENRLPTAYEDCYASLEWLSRHAASEPWLSQADISRVFLSGDSAGGNIAHQVAVKALQCKLLSINIEGLMLIHPYFGSEKRTKKEEDAEKAFNVAMNDMFWKLSIPEGSDRDYYGCNFEKDEQLRKIEWNAFPKVVVFVAGLDFLKERGVLYAEYMEKKMGEKKVKVVEAEEEEHVFHVFNPESEATRTLQQQMKDFMKKTD 337
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 305506 306519 + Bma014482.1 Bma02g00026 77276

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00026 337 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 172 184 IPR033140 -
Bma02g00026 337 PANTHER ARYLACETAMIDE DEACETYLASE 32 333 - -
Bma02g00026 337 SUPERFAMILY alpha/beta-Hydrolases 55 335 IPR029058 -
Bma02g00026 337 Pfam alpha/beta hydrolase fold 94 313 IPR013094 GO:0016787
Bma02g00026 337 Gene3D alpha/beta hydrolase 17 335 IPR029058 -
Bma02g00026 337 PANTHER CARBOXYLESTERASE 13-RELATED 32 333 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00026 - - - qsu:112016553 405.986
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00002 Bma-Chr2:89431 Bma02g00026 Bma-Chr2:305506 0 dispersed
Bma02g00026 Bma-Chr2:305506 Bma02g00462 Bma-Chr2:7322918 4.73E-66 dispersed
Bma10g01037 Bma-Chr10:28158184 Bma02g00026 Bma-Chr2:305506 1.48E-43 dispersed
Bma15g00559 Bma-Chr15:6432753 Bma02g00026 Bma-Chr2:305506 6.74E-42 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi4g475 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda13g01264 . . . Bma02g00026 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013730 1 1 0 2 1 1 1 1 1 0 1 1 1 0 0 0 1 0 0 1 0 1 1 1 1 1 1 1 1 3 25
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma02g00026 Bma_Chr02 FPKM 4.713861 5.27379 3.275097 3.265288 11.702438 12.571175 12.589571 4.504092 4.180362 3.876909