Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00029 | ATGCAAGAGCATGCTTCCACTTCTGTCGCCGCTGTTTCTTTGCCTTCCAGCAGTGAGAGGTCCTCCAGCTCTGCTCTTCATCTTGACGTCCAGGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTGCCGGAGTTAGGAGGAGAATCAGCTGGAACTTCAGCATCCGGCAGAGATAATGCTTCCAGGGCCGGTTCTGGGCTGGTTCGAGTTGCACGGGAGGGTCAAAGAAAGAGGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAAAGACTCAAAAGATTGTTGAGAAACAGAGTCTCAGCACAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGAGTGACTTGGAAACTCGGGTCAAAGAGTTGGAGAAAAAGAACTCGGAGCTAGAAGAGAGACTCTCCACTTTGCAGAAGGAGAATCAGATGCTTAGACAGGTATCTCTGCTTCATTATCTTAATTTCATGAATGACATTCTAATGCTTATTTTTATCTTGCAGATTTTGAAGAACACAACAGCTAGCAGGAAAAGTAGTAGTAGTAGCAACAATGCTGATGGATCTCTGTAG | 570 | 46.84 | MQEHASTSVAAVSLPSSSERSSSSALHLDVQEGMESDEEIRRVPELGGESAGTSASGRDNASRAGSGLVRVAREGQRKRRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSELEERLSTLQKENQMLRQVSLLHYLNFMNDILMLIFILQILKNTTASRKSSSSSNNADGSL | 189 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 322327 | 323258 | - | Bma014485.1 | Bma02g00029 | 77279 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00029 | 189 | Coils | Coil | 85 | 147 | - | - | |
Bma02g00029 | 189 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 4 | 182 | IPR044280 | GO:0000981|GO:0045944 | |
Bma02g00029 | 189 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 88 | 146 | IPR004827 | GO:0003700|GO:0006355 | |
Bma02g00029 | 189 | Pfam | bZIP transcription factor | 87 | 146 | IPR004827 | GO:0003700|GO:0006355 | |
Bma02g00029 | 189 | SUPERFAMILY | Leucine zipper domain | 90 | 146 | IPR046347 | GO:0003700|GO:0006355 | |
Bma02g00029 | 189 | MobiDBLite | consensus disorder prediction | 1 | 107 | - | - | |
Bma02g00029 | 189 | PANTHER | TRANSCRIPTIONAL ACTIVATOR HAC1 | 4 | 182 | - | - | |
Bma02g00029 | 189 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 93 | 108 | IPR004827 | GO:0003700|GO:0006355 | |
Bma02g00029 | 189 | Gene3D | Single helix bin | 109 | 147 | - | - | |
Bma02g00029 | 189 | PRINTS | cAMP response element binding (CREB) protein signature | 103 | 123 | - | - | |
Bma02g00029 | 189 | PRINTS | cAMP response element binding (CREB) protein signature | 11 | 26 | - | - | |
Bma02g00029 | 189 | PRINTS | cAMP response element binding (CREB) protein signature | 123 | 140 | - | - | |
Bma02g00029 | 189 | PRINTS | cAMP response element binding (CREB) protein signature | 85 | 101 | - | - | |
Bma02g00029 | 189 | MobiDBLite | consensus disorder prediction | 31 | 45 | - | - | |
Bma02g00029 | 189 | CDD | bZIP_HY5-like | 91 | 142 | - | - | |
Bma02g00029 | 189 | SMART | brlzneu | 86 | 150 | IPR004827 | GO:0003700|GO:0006355 | |
Bma02g00029 | 189 | MobiDBLite | consensus disorder prediction | 72 | 107 | - | - | |
Bma02g00029 | 189 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g01283 | Bma02g00029 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02698 | Bma-Chr1:84427727 | Bma02g00029 | Bma-Chr2:322327 | 1.17E-06 | dispersed | |
Bma02g00029 | Bma-Chr2:322327 | Bma04g01706 | Bma-Chr4:53280979 | 1.13E-08 | dispersed | |
Bma01g01283 | Bma-Chr1:17321138 | Bma02g00029 | Bma-Chr2:322327 | 8.19E-71 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
56837 | PF00170 | bZIP_1 | 8.10E-15 | CL0018 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00029 | K16241 | - | csv:101218051 | 215.312 |