Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00029 ATGCAAGAGCATGCTTCCACTTCTGTCGCCGCTGTTTCTTTGCCTTCCAGCAGTGAGAGGTCCTCCAGCTCTGCTCTTCATCTTGACGTCCAGGAAGGTATGGAGAGCGATGAGGAGATCAGGAGAGTGCCGGAGTTAGGAGGAGAATCAGCTGGAACTTCAGCATCCGGCAGAGATAATGCTTCCAGGGCCGGTTCTGGGCTGGTTCGAGTTGCACGGGAGGGTCAAAGAAAGAGGAGGGGAAGAAGCCCAGCTGACAGAGAAAGTAAAAGACTCAAAAGATTGTTGAGAAACAGAGTCTCAGCACAGCAAGCTAGGGAGAGGAAGAAGGCATACTTGAGTGACTTGGAAACTCGGGTCAAAGAGTTGGAGAAAAAGAACTCGGAGCTAGAAGAGAGACTCTCCACTTTGCAGAAGGAGAATCAGATGCTTAGACAGGTATCTCTGCTTCATTATCTTAATTTCATGAATGACATTCTAATGCTTATTTTTATCTTGCAGATTTTGAAGAACACAACAGCTAGCAGGAAAAGTAGTAGTAGTAGCAACAATGCTGATGGATCTCTGTAG 570 46.84 MQEHASTSVAAVSLPSSSERSSSSALHLDVQEGMESDEEIRRVPELGGESAGTSASGRDNASRAGSGLVRVAREGQRKRRGRSPADRESKRLKRLLRNRVSAQQARERKKAYLSDLETRVKELEKKNSELEERLSTLQKENQMLRQVSLLHYLNFMNDILMLIFILQILKNTTASRKSSSSSNNADGSL 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 322327 323258 - Bma014485.1 Bma02g00029 77279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00029 189 Coils Coil 85 147 - -
Bma02g00029 189 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 182 IPR044280 GO:0000981|GO:0045944
Bma02g00029 189 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 88 146 IPR004827 GO:0003700|GO:0006355
Bma02g00029 189 Pfam bZIP transcription factor 87 146 IPR004827 GO:0003700|GO:0006355
Bma02g00029 189 SUPERFAMILY Leucine zipper domain 90 146 IPR046347 GO:0003700|GO:0006355
Bma02g00029 189 MobiDBLite consensus disorder prediction 1 107 - -
Bma02g00029 189 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 4 182 - -
Bma02g00029 189 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 93 108 IPR004827 GO:0003700|GO:0006355
Bma02g00029 189 Gene3D Single helix bin 109 147 - -
Bma02g00029 189 PRINTS cAMP response element binding (CREB) protein signature 103 123 - -
Bma02g00029 189 PRINTS cAMP response element binding (CREB) protein signature 11 26 - -
Bma02g00029 189 PRINTS cAMP response element binding (CREB) protein signature 123 140 - -
Bma02g00029 189 PRINTS cAMP response element binding (CREB) protein signature 85 101 - -
Bma02g00029 189 MobiDBLite consensus disorder prediction 31 45 - -
Bma02g00029 189 CDD bZIP_HY5-like 91 142 - -
Bma02g00029 189 SMART brlzneu 86 150 IPR004827 GO:0003700|GO:0006355
Bma02g00029 189 MobiDBLite consensus disorder prediction 72 107 - -
Bma02g00029 189 MobiDBLite consensus disorder prediction 1 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01283 Bma02g00029 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02698 Bma-Chr1:84427727 Bma02g00029 Bma-Chr2:322327 1.17E-06 dispersed
Bma02g00029 Bma-Chr2:322327 Bma04g01706 Bma-Chr4:53280979 1.13E-08 dispersed
Bma01g01283 Bma-Chr1:17321138 Bma02g00029 Bma-Chr2:322327 8.19E-71 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56837 PF00170 bZIP_1 8.10E-15 CL0018 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00029 K16241 - csv:101218051 215.312