Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00034 ATGGAAGTCAGTAAAGACTGTAACGTTGACAATGGGAGCTGCTCCAAGGAGGGTCTGCCTCCGAATCCTATTCCGGCGGCTCATCGGCAATGTATTACTACCTCTGATGGTGCTCAAACACCGCGTAAGAAATCACTCGTACGCCACCAATCTCTGATGAAGACCGAGGCATTGGAAGTCACCGACGAAGAACCTGAATTTAACAAAGATGACCTTGACTCTAACTTTATTCCAATTGTTCGATCCGGAGCATCCGTCGACATTGGGTGTCGTAGCAGCATGGAAGATACATATGTTTGCATCGACAACTTTACGAGCGAAGATGGGGTTGAAAATTCCAACGATGGGCCTAGTGCTTTTTACGGGGTTTTCGATGGGCATGGAGGAAAGCATGCTGCCGAGTTTGCTCGTTGCTATTTACCGAAATTTATAGTCGAGGATGAAGGTTTCCCTACGGATATCGAGAGGGTTATTGCTTCAGCATTTTTACAAACGGATGCAGCCTTTGAAGAAGCATGTTCCTCCGATGCAGCCCTTGCATCTGGCACAACAGCTTTGGCTGCACTTGTCCTAGGAAGGTTAGATTTTAACCAATCCAAACTTTGTCTGCAAATTACATACCCTCGAGTAAATTTCACAATCTCAGTTTGTAACCGTAGGTCATTGGTGGTAGCAAATGCTGGAGACTGCCGAGCGGTGCTGAGTCGCCGGGGCAAAGCCATCGAAATGTCAAGGGACCACAAGCCCATTTGCATCAGAGAGAGGGCCCGCATTGAGTCATCCGGAGGATATATCGACGATGGTTATCTTAACGGACAGCTTAACGTGGCACGAGCATTGGGAGACTGGCACATGGAAGGAATGAAGGGCGGAGAAGGAGGGCCTCTAAGTGCCGAGCCTGAGGTCATGTCGATAAAACTAACGGAGGAAGACGAGTTTCTCGTAATAGGATGTGACGGAATGTGGGATGTATTCAGGAGCCAAAATGCTGTCGATTTTGCCAGACGGAGGCTGCAAAAGCATAACGACCCCGCCCTGTGCAGCAAGGATTTGGTCGAGGAGGCTTTGAAGAGAAAGAGTGGGGACAATTTGGCTGTGGTCGTGGTCTGTTTCCAAAGCCATCCTCCGCCCAATTTGGCCACTCCTGGAAGGAGAGTGCGGCGGAGCTTTTCAGCTGAAGGGTTGAGAGAGTTGCAAAGCTTTCTGGATAGCTTAAAGCAAAATTGA 1227 48.9 MEVSKDCNVDNGSCSKEGLPPNPIPAAHRQCITTSDGAQTPRKKSLVRHQSLMKTEALEVTDEEPEFNKDDLDSNFIPIVRSGASVDIGCRSSMEDTYVCIDNFTSEDGVENSNDGPSAFYGVFDGHGGKHAAEFARCYLPKFIVEDEGFPTDIERVIASAFLQTDAAFEEACSSDAALASGTTALAALVLGRLDFNQSKLCLQITYPRVNFTISVCNRRSLVVANAGDCRAVLSRRGKAIEMSRDHKPICIRERARIESSGGYIDDGYLNGQLNVARALGDWHMEGMKGGEGGPLSAEPEVMSIKLTEEDEFLVIGCDGMWDVFRSQNAVDFARRRLQKHNDPALCSKDLVEEALKRKSGDNLAVVVVCFQSHPPPNLATPGRRVRRSFSAEGLRELQSFLDSLKQN 408
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 353468 355275 - Bma014490.1 Bma02g00034 77284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00034 408 SMART PP2C_4 71 369 IPR001932 -
Bma02g00034 408 CDD PP2Cc 80 371 IPR001932 -
Bma02g00034 408 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 219 389 - -
Bma02g00034 408 Gene3D - 61 375 IPR036457 -
Bma02g00034 408 Coils Coil 395 408 - -
Bma02g00034 408 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
Bma02g00034 408 Pfam Protein phosphatase 2C 89 363 IPR001932 -
Bma02g00034 408 MobiDBLite consensus disorder prediction 1 23 - -
Bma02g00034 408 ProSiteProfiles PPM-type phosphatase domain profile. 81 371 IPR001932 -
Bma02g00034 408 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 54 193 - -
Bma02g00034 408 SUPERFAMILY PP2C-like 75 373 IPR036457 -
Bma02g00034 408 PANTHER PROTEIN PHOSPHATASE 2C 54 193 IPR015655 GO:0004722|GO:0006470
Bma02g00034 408 PANTHER PROTEIN PHOSPHATASE 2C 219 389 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02414 Bma-Chr1:81713453 Bma02g00034 Bma-Chr2:353468 7.72E-112 dispersed
Bma02g00034 Bma-Chr2:353468 Bma11g00622 Bma-Chr11:9801234 1.22E-119 dispersed
Bma12g01239 Bma-Chr12:45430399 Bma02g00034 Bma-Chr2:353468 2.09E-34 dispersed
Bma02g00034 Bma-Chr2:353468 Bma04g00294 Bma-Chr4:2356598 2.82E-117 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00034 K14803 - zju:107421256 525.783