Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00044 ATGTCGTCGCCAGACCTCCCTGTTTCACGCCCTCGAACTACACGAGACCCAGACGAAACCCCTCATCCCCTGTCTCCCTCCACTTTTCCGGGCAAAGTAGCGGACTTCTTCAAATCCAATCTGGTTTTCCGGTCCAAATGGGGTGAAATTAATGGGGCTATGGGCGATTTAGGGACTTATATTCCTATCGTGTTGGCTTTGACGCTGTCGAAGGACCTTAACTTAGGCACTACGCTGATTTTCACAGGTATTTACAACATCATCACCGGCGTTGTCTACGGCGTTCCGATGCCTGTCCAGCCGATGAAATCAATCGCCGCTGTTGCCTTATCTACTACCGATTTCGGTATCCCAGAGATCATGGCCGCCGGCATACTAACGGGAGGGACACTGATTTTACTGGGGGTCACCGGTTTGATGGAGCTCGCCTACTGGCTGATTCCTTTGCCTGTTGTTAGGGGGATTCAGCTAGCTCAAGGCTTATCTTTTGCACTAACTGCTGTTAGATACGTTCGTTATGATCAAAATATGGCCAAGTCCAAATCTCTCGATCACAGGGAGTGGTTCGGTTTGGACGGGCTGGTTTTGGCTCTCTTTTGTGCTTGTTTTGTTGTTATTGTTAATGGAGCAGGCGAAGAAAACCACGGCGAAGAATCCGAGGATGACAGAGGAGGGCGATTTAGAAGATCAACGGCCAGATTGAGGAAACTCATTTACTCACTCCCTTCAGCCTTTCTTATATTTTTGCTGGGTCTTGTTTTGGCATTTATAAGGAAGCCTAATATGGTGAAAGACGTCAACTTTGGCCCATCTTCCATTGATATTGTGAAGATATCAAAACATGCATGGAAAGATGGGTTCATAAAGGGGACAATCCCTCAGCTCCCTCTCTCAATTTTGAATTCTGTGATTGCCGTTTGCAAATTGTCGTCTGATCTGTTTCCAGGCAGGGACTTTTCAGCCACTTCGTTGTCGGTGACTGTCGGGCTGATGAACGTGATAGGGTGTTGGTTTGGGGCCTTGCCGACGTGCCATGGTGCCGGTGGGCTAGCCGGGCAGTACAAGTTTGGGGGAAGAAGTGGTGGGTGCGTGGCGATTCTTGGCGCATCCAAAACGACACTTGGTTTGGTTTTGGGTAGTTCTTTGGTGGTGATTCTGAGGCATTTTCCGGTCGGAATTCTGGGGATTTTGCTACTTTTCGCCGGAGTGGAGCTTGCTATGGCTTCCAGAGACATGACCAGTAAAGAGCAGTCGTTTGTGCTGCTCATTTGCACGGCAGTCTCACTCGTAGGCTCAAGCGCTGCGCTTGGTTTCTTGTGTGGGATGAAAATGCATGTAAAGGCCGCTCAATCCGCATTTAGGGATCGGACACAGGAATTCCAGAGTGTTGCGGAGAGGCTGAAGAAGTCATTTTCATCATCTTCTGAGCAAAATGGGCCTAGTAATGCTTTGAAATTAGAGGATCAACGATCTGCAGTGGCAATTCAGTCTGAATTTAATAGAAGAGCTTCTAAAATCGGCTATGGAATACATCAGACATCGCAAAAACTTTCAAAGCTGGCTAAGTTGGCAAAAAGGACTTCAGTTTTTGATGATCCTATTGTGGAAATTCAGGAATTGACGGCAGTTATAAAGCAAGATATTACCGCATTGAACTCCGCAGTTGTAGACCTTCAGCTGCTTTCTCATTCCAGAAATGAGACCGGGAATATTTCCAGGGACACAACTAGTCATTCAACCACTGTTGTAGATGACCTGAAGAATAGGCTAATGAGCGCTACAAAGGAATTCAAAGAAGTCCTCACTATGCGAACAGAGAACTTGAAGGTTCATGAAAACAGAAGACAATTGTTTTCTTCCACTGCCTCCAAAGATTCTGCCAACCCTTTTGTTCGTCAGCGTCCATTAGTTTCCAGGTCAGCTGCTAGTCCATCGAATGCACCTCCTCCTCCATGGGCAAATGGGTCAGCATCTTCGTCCCAGTCAAGACATATGTGGTTCCACCACGTTGTTTTTAGTTTCTTATGTAACAATAATATATGTCTAAGAAATTTCTATGACAGAAAGCAGGCAGATGGGGAAAGTCAGCCACTTCACCAGCACCAGCACCAGCAACAACAACAGTTAGTTCCGTTGCAAGACAGTTACATGCAGAGCAGAGCTGAAGCTCTTCAAAATGTTGAGTCCACTATTCATGAGTTGAGCAGCATTTTCAACCAACTTGCAACCCTTGTTTCCCAGCAAGGAGAGATTGCCATAAGAATTGATGAGAACATGGATGACACGTTGGCAAATGTCGAGGGAGCGCAGGGAGCTCTGCTCAAGTATTTGAACAGCATATCTTCGAATAGGTGGCTGATGATAAAAATTTTCTTCGTATTAATATTTTTCCTGATGGTTTTCCTATTTTTTGTGGCCTAG 2421 46.18 MSSPDLPVSRPRTTRDPDETPHPLSPSTFPGKVADFFKSNLVFRSKWGEINGAMGDLGTYIPIVLALTLSKDLNLGTTLIFTGIYNIITGVVYGVPMPVQPMKSIAAVALSTTDFGIPEIMAAGILTGGTLILLGVTGLMELAYWLIPLPVVRGIQLAQGLSFALTAVRYVRYDQNMAKSKSLDHREWFGLDGLVLALFCACFVVIVNGAGEENHGEESEDDRGGRFRRSTARLRKLIYSLPSAFLIFLLGLVLAFIRKPNMVKDVNFGPSSIDIVKISKHAWKDGFIKGTIPQLPLSILNSVIAVCKLSSDLFPGRDFSATSLSVTVGLMNVIGCWFGALPTCHGAGGLAGQYKFGGRSGGCVAILGASKTTLGLVLGSSLVVILRHFPVGILGILLLFAGVELAMASRDMTSKEQSFVLLICTAVSLVGSSAALGFLCGMKMHVKAAQSAFRDRTQEFQSVAERLKKSFSSSSEQNGPSNALKLEDQRSAVAIQSEFNRRASKIGYGIHQTSQKLSKLAKLAKRTSVFDDPIVEIQELTAVIKQDITALNSAVVDLQLLSHSRNETGNISRDTTSHSTTVVDDLKNRLMSATKEFKEVLTMRTENLKVHENRRQLFSSTASKDSANPFVRQRPLVSRSAASPSNAPPPPWANGSASSSQSRHMWFHHVVFSFLCNNNICLRNFYDRKQADGESQPLHQHQHQQQQQLVPLQDSYMQSRAEALQNVESTIHELSSIFNQLATLVSQQGEIAIRIDENMDDTLANVEGAQGALLKYLNSISSNRWLMIKIFFVLIFFLMVFLFFVA 806
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 405104 411011 - Bma014500.1 Bma02g00044 77294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00044 806 ProSitePatterns Syntaxin / epimorphin family signature. 720 759 IPR006012 GO:0005484|GO:0006886|GO:0016020
Bma02g00044 806 SUPERFAMILY t-snare proteins 497 769 IPR010989 GO:0016020|GO:0016192
Bma02g00044 806 Pfam SNARE domain 750 802 IPR000727 -
Bma02g00044 806 PANTHER MOLYBDATE TRANSPORTER 1/2-RELATED 36 446 - -
Bma02g00044 806 MobiDBLite consensus disorder prediction 1 28 - -
Bma02g00044 806 Pfam Molybdate transporter of MFS superfamily 287 405 IPR031563 GO:0015098|GO:0015689
Bma02g00044 806 Pfam Molybdate transporter of MFS superfamily 48 163 IPR031563 GO:0015098|GO:0015689
Bma02g00044 806 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 714 776 IPR000727 -
Bma02g00044 806 PANTHER - 36 446 IPR031563 GO:0015098|GO:0015689
Bma02g00044 806 CDD SNARE_syntaxin5 717 795 - -
Bma02g00044 806 MobiDBLite consensus disorder prediction 636 659 - -
Bma02g00044 806 Gene3D - 492 769 - -
Bma02g00044 806 Pfam Syntaxin-5 N-terminal, Sly1p-binding domain 453 469 IPR021538 -
Bma02g00044 806 SMART tSNARE_6 709 776 IPR000727 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00044 Bma-Chr2:405104 Bma06g00576 Bma-Chr6:31000780 1.74E-79 dispersed
Bma03g00258 Bma-Chr3:1980011 Bma02g00044 Bma-Chr2:405104 3.50E-80 transposed
Bma01g01301 Bma-Chr1:17796870 Bma02g00044 Bma-Chr2:405104 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00044 - - pvy:116133098 627.476