Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00051 GAGCGCATACCAATTGAGGAAGTGTTTGAGCAGTTGAAATGTTCACGAGAAGGTTTAACGACGGAGGAAGGAGGCAACCGGGAGAGCAAATTTCTCAAGTTTCTAGGCTTCATGTGGAATCCTTTATCTTGGGTCATGGAAGCTGCTGCTCTGATGGCTATAGCTCTCGCCAACGGCGACGGCAGACCTCCGGACTGGCAGGATTTTGTCGGAATCATTGTTCTACTTCTTATAAACTCTACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCAGCAGCCTTGATGGCAGGTCTTGCACCAAAGACTAAGGTTCTTAGAGATGGACGCTGGAGTGAGCAAGATGCGGCCATTCTTGTCCCAGGAGATATAATCAGCATCAAGCTAGGAGACATAATTCCGGCGGATGCCCGACTTCTCGAGGGAGATCCTCTGAAAATCGATCAATCTGCTCTGACCGGAGAATCCCTTCCCGTCACTAAGAATCCATCAGACGAAGTATTTTCCGGCTCAACGTGCAAACAAGGTGAAATTGAAGCTGTTGTGATTGCCACTGGTGTGCACACCTTCTTTGGCAAAGCTGCCCACTTGGTCGACAGCACCAATCAAGTTGGTCATTTCCAGAAAGTTCTTACCGCCATTGGTAACTTCTGTATCTGCTCCATTGCTGTCGGGATAGTAATTGAGATCTTGTCTGTCACCATGGCTATTGGCTCTCACAGGCTCTCTCAGCAAGGCGCTATTACGAAAAGAATGACTGCCATCGAGGAAATGGCGGGCATGGATGTCCTTTGTAGTGACAAGACAGGAACTCTAACCTTAAACAAGTTAACTGTCGACAGCAGCTTGATCGAAGTGTTTGCTAAAGGTGTGGAAAAAGATCATGTGATTCTTTTGGCAGCAAGAGCTTCTAGGATTGAAAATCAAGATGCCATCGATGCTGCCATTGTCGGAATGCTTGCAGATCCCAAAGAGGCCCGAGCCGACGTTAAGGAGGTTCATTTTCTTCCTTTCAATCCCGTCGACAAGAGGACTGCACTAACGTACATTGACTCGGCTGGAAATTGGCACCGAGCTAGCAAAGGTGCTCCTGAACAGATTCTAAATCTTTGCAACTGTAAGGAAGATGTTAGAAGAAAGGTTCATGCAGTGATCGATAAGTTTGCTGAGCGTGGACTTCGATCTTTAGCCATTGCAAGACAGGAAGTGCCTGAGAGATCAAAAGATGGTTCTGGGGCTCCATGGGAGTTTGTTGGGTTGTTGTCTCTATTTGATCCTCCGAGACACGATAGTGCCGAAACGATCCGAAGAGCTCTGAATCTCGGAGTGAATGTCAAGATGATTACTGGTGATCAACTTGCCATTGCCAAGGAGACCGGTCGACGTCTCGGAATGGGAACTAACATGTATCCTTCGTCTTCAGTTGTGTTAAAGAGTGTTCAATTTCATGTAACAGAGCACAAATATGAAATTGTCAAAAGGCTACAAGATAAAAAACACATTTGTGGAATGACGGGAGATGGCGTTGCCGACGCTACTGATGCAGCCAGGATCTACGCAGTTTCAATCACCATTCGTATAGTGTTTGGTTTTATGTTCATTGCTTTGATTTGGAAGTTCGACTTTGCGCCCTTCATGGTTTTAATCATAGCCATTCTAAACGATGGAACAATCATGACGATTTCGAAAGATCGCGTCAAGCCATCTCCAGACAAGTTCAATGTTAGATCAATTAGGACTAGTCGCGATGAAAAGATGGCGGCATTATACCTGCAAGTGAGCATAGTGAGTCAGGCTCTTATTTTCGTGACGAGATCTCGTGGCTGGTCCTTCGCTGAACGTCCGGGACTTCTTTTAGTTGGTGCTTTCATAATGGCTCAGCTGGTGGCGACCGTAATAGCGGTGTATGCGAATTGGGGTTTTGCTCGAATAAAAGGAATGGGGTGGGGCTGGGCTGGTGTGATCTGGCTTTATAGCGTGGTTACGTATATCCCGCTCGATTTTCTGAAATTTGCGACTCGTTACGTGCTCAGTGGGAAGGCTTGGGACACTCTTTTGGAGAAAAAGACTGCCTTCACGTCAAAGAAAGACTATGGCAAAGAAGATAGACAAGCACAATGGGCGGCTGCACAAAGAACCTTACACGGCCTTCAACCGCCTACCCCGACTAGCCTTTTCACGGACAAAAGTAGTTATAGGGAACTTTCCGAGATTGCCGAGCAAGCCAAGCGACGAGCTGAAGTTGCAAGGCTCCGAGAATTGAATACGCTCAAGGGTCACGTTGAATCGGTTGTAAAGCTTAAAGGATTGGATATTGATACAATTCAACAACACTACACAGTCTAA 2352 46.39 ERIPIEEVFEQLKCSREGLTTEEGGNRESKFLKFLGFMWNPLSWVMEAAALMAIALANGDGRPPDWQDFVGIIVLLLINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGRWSEQDAAILVPGDIISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAVGIVIEILSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDSSLIEVFAKGVEKDHVILLAARASRIENQDAIDAAIVGMLADPKEARADVKEVHFLPFNPVDKRTALTYIDSAGNWHRASKGAPEQILNLCNCKEDVRRKVHAVIDKFAERGLRSLAIARQEVPERSKDGSGAPWEFVGLLSLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSVVLKSVQFHVTEHKYEIVKRLQDKKHICGMTGDGVADATDAARIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPDKFNVRSIRTSRDEKMAALYLQVSIVSQALIFVTRSRGWSFAERPGLLLVGAFIMAQLVATVIAVYANWGFARIKGMGWGWAGVIWLYSVVTYIPLDFLKFATRYVLSGKAWDTLLEKKTAFTSKKDYGKEDRQAQWAAAQRTLHGLQPPTPTSLFTDKSSYRELSEIAEQAKRRAEVARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 455665 459633 + Bma014507.1 Bma02g00051 77301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00051 783 Gene3D - 103 187 - -
Bma02g00051 783 SFLD p-type atpase 249 514 IPR044492 -
Bma02g00051 783 Gene3D - 264 513 IPR023214 -
Bma02g00051 783 SUPERFAMILY HAD-like 255 516 IPR036412 -
Bma02g00051 783 Pfam E1-E2 ATPase 102 240 - -
Bma02g00051 783 PANTHER PLASMA MEMBRANE ATPASE 232 515 - -
Bma02g00051 783 PANTHER PLASMA MEMBRANE ATPASE 1 232 - -
Bma02g00051 783 Gene3D - 65 233 - -
Bma02g00051 783 PRINTS P-type cation-transporting ATPase superfamily signature 138 152 - -
Bma02g00051 783 PRINTS P-type cation-transporting ATPase superfamily signature 421 432 - -
Bma02g00051 783 PRINTS P-type cation-transporting ATPase superfamily signature 507 526 - -
Bma02g00051 783 PRINTS P-type cation-transporting ATPase superfamily signature 267 281 - -
Bma02g00051 783 PRINTS P-type cation-transporting ATPase superfamily signature 443 453 - -
Bma02g00051 783 Gene3D - 514 572 - -
Bma02g00051 783 Gene3D - 234 263 - -
Bma02g00051 783 Gene3D - 573 678 - -
Bma02g00051 783 PRINTS H+-transporting ATPase (proton pump) signature 507 523 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00051 783 PRINTS H+-transporting ATPase (proton pump) signature 383 401 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00051 783 PRINTS H+-transporting ATPase (proton pump) signature 479 495 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00051 783 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 273 432 IPR023299 GO:0000166
Bma02g00051 783 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 72 287 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00051 783 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 333 514 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00051 783 Gene3D - 279 426 IPR023299 GO:0000166
Bma02g00051 783 SFLD C1.7: P-type atpase like 249 514 - -
Bma02g00051 783 SUPERFAMILY Calcium ATPase, transmembrane domain M 2 679 IPR023298 -
Bma02g00051 783 Pfam haloacid dehalogenase-like hydrolase 263 516 - -
Bma02g00051 783 SUPERFAMILY Calcium ATPase, transduction domain A 103 200 IPR008250 -
Bma02g00051 783 SMART Cation_ATPase_N_a_2 1 58 IPR004014 -
Bma02g00051 783 PANTHER CALCIUM-TRANSPORTING ATPASE 232 515 - -
Bma02g00051 783 PANTHER CALCIUM-TRANSPORTING ATPASE 573 763 - -
Bma02g00051 783 PANTHER CALCIUM-TRANSPORTING ATPASE 1 232 - -
Bma02g00051 783 PANTHER CALCIUM-TRANSPORTING ATPASE 519 572 - -
Bma02g00051 783 Coils Coil 734 754 - -
Bma02g00051 783 ProSitePatterns E1-E2 ATPases phosphorylation site. 269 275 IPR018303 -
Bma02g00051 783 PANTHER PLASMA MEMBRANE ATPASE 573 763 - -
Bma02g00051 783 PANTHER PLASMA MEMBRANE ATPASE 519 572 - -
Bma02g00051 783 Gene3D - 732 783 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02129 Bma02g00051 CCT
Bma02g00051 Bma04g00037 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00051 Bma-Chr2:455665 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma01g02129 Bma-Chr1:77782617 Bma02g00051 Bma-Chr2:455665 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00051 K01535 - mnt:21385870 1303.89