Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00062 ATGGCTGACATTTCCTTGGAGGACGTGAAAAATGAGAACGTTGATCTTGAGCGGATTCCGATCGAGGAAGTCTTCGAGCAGCTCAAATGTACGAGAGAAGGTTTGACGAACAATGAAGGTGAGAAAAGGCTTGGAATTTTCGGTCCGAACAAGCTTGAGGAGAAAAAGGAGAGCAAGATTCTCAAGTTTTTGGGATTTATGTGGAATCCTCTTTCATGGGTCATGGAATGTGCAGCTATTATGGCGATTGTCCTCGCCAATGGAGGGGGGAAGCCGCCGGACTGGCAAGACTTCATCGGAATTGTGGTGTTGCTCATCATCAACTCAACCATCAGCTTCATCGAGGAGAACAACGCCGGCAATGCCGCGGCTGCCCTCATGGCAGGGCTTGCGCCAAAGACGAAGGTTTTGAGGGATGGAAAATGGACTGAGCAAGAGGCGTCAATTCTGGTTCCCGGAGATGTGATCAGCATCAAGCTGGGAGATATCGTCCCGGCCGATGCTCGTCTTCTCGAAGGGGACCCTCTTAAGATCGACCAATCTGCCCTCACCGGTGAGTCTTTACCCGTCACCAAGCACCCCGGCGATGAGGTCTTCTCCGGTTCCACCTGCAAGCAGGGTGAGATCGAGGCTATCGTCATTGCCACCGGAGTCCATACCTTCTTCGGAAAGGCTGCTCATCTCGTCGACAGCACAAATCAAGTTGGTCATTTCCAGAAGGTGTTGACTGCCATTGGTAACTTCTGTATCTGCTCAATTGCGATCGGAATGGCTATCGAGATCGTAGTTATGTTCCCAATTCAGAAGAGAAGATATAGAGAGGGAATTGATAACTTGTTGGTGCTTCTCATCGGAGGTATTCCGATTGCCATGCCGACCGTCTTGTCCGTAACTATGGCTATTGGCTCCCACCGCCTTTCTGAGCAAGGGGCCATTACAAAGAGAATGACAGCCATTGAAGAGATGGCCGGAATGGATGTTCTCTGCAGTGACAAAACCGGGACACTTACGCTCAACAAACTTACAGTCGACAAGACCCTCATCGAGGTATTCACGGAGGGTACGGATAAAGACACCGTCGTCTTGCTGGCTGCGAGGGCGTCGAGGGTTGAAAACCAGGACGCCATTGATGCCTGCATCGTTGGAATGTTGGGTGATCCTAGAGAGGCTAGAGCCGGCATCACCGAAGTGCATTTCCTGCCGTTCAATCCAGTCGATAAACGCACAGCCATCACATACGTTGACAGTGAAGGAAACTGGCACAGAAGCAGCAAGGGAGCTCCTGAGCAGATTATTGATCTCTGTGATCTGAAGGGAGATGTGAGAAAGAAGGCTCATCTTGTGATCGACAGCTACGCCGAGCGTGGTCTTCGTTCCCTCGCCGTCGCTCAACAGACAGTTTCAGAGAAGACAAAGGAGAGCGAGGGAGATAAGTGGGAGTTCATTGGTCTCTTGCCCTTATTTGACCCACCAAGGCATGACAGTGCGGAGACAATCCGACGGGCCCTTGAACTTGGCGTTAACGTTAAAATGATCACCGGTGACCAACTCGCCATCGGAAAAGAAACCGGACGGCGACTTGGGATGGGTACAAACATGTATCCTTCATCCTCCCTGCTCGGTCAAAGCAAGGACGAGTCTATTGCTTCCATTCCCGTCAACGAGCTCATCGAGAAGGCCGATGGATTCGCCGGCGTCTTCCCAGGTGATAACCCTAAATACTTTCACGTTAAATGCGCAGAACACAAATACGAAATCGTTAAGAAGCTGCAAGAGATGAAGCACATTTGTGGAATGACCGGAGATGGAGTTAACGATGCTCCGGCGTTGAAGAAGGCCGACATCGGAATCGCCGTGGCTGACGCAACAGATGCTGCGAGAAGTGCATCGGACATTGTTCTGACGGAGCCGGGTTTGAGCGTGATCGTGAGTGCTGTGCTGACGAGCAGAGCCATTTTTCAGAGGATGAAAAATTATACCATTTACGCAGTATCCATCACTATCCGTATCGTGTTGGGATTCATGCTCGTCGCCCTTCTCTGGAAATTCGACTTCTCGCCCTTCATGGTCTTGATCATCGCCATCTTGAACGACGGAACAATCATGACCATCTCTAAAGACAGAGTGAAGCCGTCGCCACTCCCCGACTCGTGGAAGCTCAAAGAAATCTTCGCCACCGGAGTTGTTCTCGGAACATACATGGCCGTCATGACAGTCGTCTTCTTCTGGCTCGCAAACGAAACTGATTTCTTCTCGGACACTTTTGGTGTAAGGTCGATCAAGGGTAGCCCGACTGAGCTTAACTCAGCTCTGTACCTTCAAGTGAGCATTATCAGTCAAGCTCTCATCTTCGTCACACGATCAAGGAGCTGGTCCTACGTAGAACGGCCGGGCGTCTTGCTCGTCGGAGCCTTCATTGCTGCACAGTTGGTGGCTACTGTCATTGCAGTGTATGCCGGTTGGGAGTTTGCCAAGATTCAAGGCATTGGATGGGGATGGGCAGGAGTGATCTGGATCTACAGCGCCGTCACTTACATCCCTCTCGACGTCCTCAAGTTCATCATCCGCTACGCGTTGAGCGGGAAGGCATGGGATAATATGCTTCAAAACAAGACTGCATTCACTACTAAGAAGGATTACGGAAAGGGAGAGAGGGAGGCTCAATGGGCGTTGGCTCAACGAACCCTTCACGGCCTCGAGGCGCCGGAAGTCCACTTCCACGACAAGAACATCCACCTCGACCACTCCGACGTCGCCGACCAGGCCAAGAGACGCGCCGAAGTTGCTCGGATTTGCAGGTTGAGAGAACTGCATACTCTGAAGGGTCACGTTGAATCAGTCGTGAAGCTAAAGGGTCTGGACATTGAAACCATCCAACAGCATTACACTGTTTAA 2895 51.19 MADISLEDVKNENVDLERIPIEEVFEQLKCTREGLTNNEGEKRLGIFGPNKLEEKKESKILKFLGFMWNPLSWVMECAAIMAIVLANGGGKPPDWQDFIGIVVLLIINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWTEQEASILVPGDVISIKLGDIVPADARLLEGDPLKIDQSALTGESLPVTKHPGDEVFSGSTCKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMAIEIVVMFPIQKRRYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIEVFTEGTDKDTVVLLAARASRVENQDAIDACIVGMLGDPREARAGITEVHFLPFNPVDKRTAITYVDSEGNWHRSSKGAPEQIIDLCDLKGDVRKKAHLVIDSYAERGLRSLAVAQQTVSEKTKESEGDKWEFIGLLPLFDPPRHDSAETIRRALELGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSSLLGQSKDESIASIPVNELIEKADGFAGVFPGDNPKYFHVKCAEHKYEIVKKLQEMKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLVALLWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGTYMAVMTVVFFWLANETDFFSDTFGVRSIKGSPTELNSALYLQVSIISQALIFVTRSRSWSYVERPGVLLVGAFIAAQLVATVIAVYAGWEFAKIQGIGWGWAGVIWIYSAVTYIPLDVLKFIIRYALSGKAWDNMLQNKTAFTTKKDYGKGEREAQWALAQRTLHGLEAPEVHFHDKNIHLDHSDVADQAKRRAEVARICRLRELHTLKGHVESVVKLKGLDIETIQQHYTV 964
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 498185 502102 - Bma014517.1 Bma02g00062 77312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00062 964 PANTHER CALCIUM-TRANSPORTING ATPASE 1 941 - -
Bma02g00062 964 PANTHER PLASMA MEMBRANE ATPASE 1 941 - -
Bma02g00062 964 Gene3D - 132 216 - -
Bma02g00062 964 CDD P-type_ATPase_H 34 853 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma02g00062 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 101 362 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00062 964 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 581 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00062 964 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Bma02g00062 964 Gene3D - 94 827 - -
Bma02g00062 964 Pfam haloacid dehalogenase-like hydrolase 325 614 - -
Bma02g00062 964 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 859 IPR023298 -
Bma02g00062 964 PRINTS H+-transporting ATPase (proton pump) signature 772 793 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00062 964 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00062 964 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bma02g00062 964 SUPERFAMILY HAD-like 325 647 IPR036412 -
Bma02g00062 964 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 34 818 IPR006534 GO:0008553|GO:0016021|GO:0120029
Bma02g00062 964 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Bma02g00062 964 SFLD Haloacid Dehalogenase 311 652 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 505 515 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 483 494 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 600 619 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Bma02g00062 964 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Bma02g00062 964 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Bma02g00062 964 Pfam E1-E2 ATPase 131 308 - -
Bma02g00062 964 Gene3D - 912 964 - -
Bma02g00062 964 SFLD p-type atpase 311 652 IPR044492 -
Bma02g00062 964 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Bma02g00062 964 Gene3D - 341 488 IPR023299 GO:0000166
Bma02g00062 964 Gene3D - 326 637 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00382 Bma-Chr1:3148232 Bma02g00062 Bma-Chr2:498185 0 dispersed
Bma02g00062 Bma-Chr2:498185 Bma06g01014 Bma-Chr6:46708766 0 dispersed
Bma01g01317 Bma-Chr1:18021017 Bma02g00062 Bma-Chr2:498185 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00062 K01535 - csv:101214655 1632.46