Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00090 ATGGCCGCCGATAAGCTTGGAGGAACTCCATTCTTGGGGTTGTTCGCTGTGGCGATAGCGCATGCACTTGTGGTGGCTGTAATGATATCCGGCGGCCACATTTCCGGCGGTCATCTCAATCCAGCCGTCACTCTCGGCCTACTCGTCGGTGGGCATATCACCTTCTTCAGATCCGTTCTCTACTGGATCGATCAGTTGCTAGCATCAGCCGCAGCTTGTTATCTCCTTTCTTATCTCACCGGAGGACTGACAACTCCGATCCATTCACTGGCGAGTGGAGTCGACTACTTACAGGGTGTAATATGGGAGGTGGTATTAACATTTTCGTTGCTGTTCACTGTGTATGGAACGATAGTGGACCCGAAAAAAGGAGCCATTGATGGGCTGGGGCCAACGCTGACTGGGTTTGTGGTGGGAGCCAACATCTTAGCCGGAGGGGCCTTCTCCGGCGCTTCGATGAACCCAGCAAGGTCCTTCGGCCCTGCGTTGGTGAGCTGGGACTGGACCGACCACTGGGTTTACTGGGTCGGCCCCCTCATCGGTGGAGGTCTTGCTGGATTTGTCTATGAAAATTTCTTCATTCTTAGGCCTTCTCATCTCCCTCTTGCCAGAGGAGACGATGATATCTACTGA 633 53.55 MAADKLGGTPFLGLFAVAIAHALVVAVMISGGHISGGHLNPAVTLGLLVGGHITFFRSVLYWIDQLLASAAACYLLSYLTGGLTTPIHSLASGVDYLQGVIWEVVLTFSLLFTVYGTIVDPKKGAIDGLGPTLTGFVVGANILAGGAFSGASMNPARSFGPALVSWDWTDHWVYWVGPLIGGGLAGFVYENFFILRPSHLPLARGDDDIY 210
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 785914 786827 - Bma014545.1 Bma02g00090 77340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00090 210 PANTHER AQUAPORIN TIP4-1 1 207 - -
Bma02g00090 210 PANTHER AQUAPORIN-8 1 207 IPR034294 -
Bma02g00090 210 ProSitePatterns MIP family signature. 38 46 IPR022357 -
Bma02g00090 210 SUPERFAMILY Aquaporin-like 9 201 IPR023271 -
Bma02g00090 210 PRINTS Major intrinsic protein family signature 20 44 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma02g00090 210 PRINTS Major intrinsic protein family signature 102 120 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma02g00090 210 PRINTS Major intrinsic protein family signature 135 157 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma02g00090 210 PRINTS Major intrinsic protein family signature 172 192 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma02g00090 210 PRINTS Major intrinsic protein family signature 57 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bma02g00090 210 Gene3D Glycerol uptake facilitator protein. 1 204 IPR023271 -
Bma02g00090 210 Pfam Major intrinsic protein 12 189 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00090 Bma-Chr2:785914 Bma04g00584 Bma-Chr4:5587666 7.32E-61 dispersed
Bma13g00675 Bma-Chr13:17421809 Bma02g00090 Bma-Chr2:785914 1.55E-21 dispersed
Bma13g00679 Bma-Chr13:17593319 Bma02g00090 Bma-Chr2:785914 1.26E-20 dispersed
Bma02g00090 Bma-Chr2:785914 Bma10g00051 Bma-Chr10:539004 4.30E-70 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00090 K09873 - jre:109009497 347.051