Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00090 | ATGGCCGCCGATAAGCTTGGAGGAACTCCATTCTTGGGGTTGTTCGCTGTGGCGATAGCGCATGCACTTGTGGTGGCTGTAATGATATCCGGCGGCCACATTTCCGGCGGTCATCTCAATCCAGCCGTCACTCTCGGCCTACTCGTCGGTGGGCATATCACCTTCTTCAGATCCGTTCTCTACTGGATCGATCAGTTGCTAGCATCAGCCGCAGCTTGTTATCTCCTTTCTTATCTCACCGGAGGACTGACAACTCCGATCCATTCACTGGCGAGTGGAGTCGACTACTTACAGGGTGTAATATGGGAGGTGGTATTAACATTTTCGTTGCTGTTCACTGTGTATGGAACGATAGTGGACCCGAAAAAAGGAGCCATTGATGGGCTGGGGCCAACGCTGACTGGGTTTGTGGTGGGAGCCAACATCTTAGCCGGAGGGGCCTTCTCCGGCGCTTCGATGAACCCAGCAAGGTCCTTCGGCCCTGCGTTGGTGAGCTGGGACTGGACCGACCACTGGGTTTACTGGGTCGGCCCCCTCATCGGTGGAGGTCTTGCTGGATTTGTCTATGAAAATTTCTTCATTCTTAGGCCTTCTCATCTCCCTCTTGCCAGAGGAGACGATGATATCTACTGA | 633 | 53.55 | MAADKLGGTPFLGLFAVAIAHALVVAVMISGGHISGGHLNPAVTLGLLVGGHITFFRSVLYWIDQLLASAAACYLLSYLTGGLTTPIHSLASGVDYLQGVIWEVVLTFSLLFTVYGTIVDPKKGAIDGLGPTLTGFVVGANILAGGAFSGASMNPARSFGPALVSWDWTDHWVYWVGPLIGGGLAGFVYENFFILRPSHLPLARGDDDIY | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 785914 | 786827 | - | Bma014545.1 | Bma02g00090 | 77340 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00090 | 210 | PANTHER | AQUAPORIN TIP4-1 | 1 | 207 | - | - | |
Bma02g00090 | 210 | PANTHER | AQUAPORIN-8 | 1 | 207 | IPR034294 | - | |
Bma02g00090 | 210 | ProSitePatterns | MIP family signature. | 38 | 46 | IPR022357 | - | |
Bma02g00090 | 210 | SUPERFAMILY | Aquaporin-like | 9 | 201 | IPR023271 | - | |
Bma02g00090 | 210 | PRINTS | Major intrinsic protein family signature | 20 | 44 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma02g00090 | 210 | PRINTS | Major intrinsic protein family signature | 102 | 120 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma02g00090 | 210 | PRINTS | Major intrinsic protein family signature | 135 | 157 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma02g00090 | 210 | PRINTS | Major intrinsic protein family signature | 172 | 192 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma02g00090 | 210 | PRINTS | Major intrinsic protein family signature | 57 | 76 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Bma02g00090 | 210 | Gene3D | Glycerol uptake facilitator protein. | 1 | 204 | IPR023271 | - | |
Bma02g00090 | 210 | Pfam | Major intrinsic protein | 12 | 189 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00090 | Bma-Chr2:785914 | Bma04g00584 | Bma-Chr4:5587666 | 7.32E-61 | dispersed | |
Bma13g00675 | Bma-Chr13:17421809 | Bma02g00090 | Bma-Chr2:785914 | 1.55E-21 | dispersed | |
Bma13g00679 | Bma-Chr13:17593319 | Bma02g00090 | Bma-Chr2:785914 | 1.26E-20 | dispersed | |
Bma02g00090 | Bma-Chr2:785914 | Bma10g00051 | Bma-Chr10:539004 | 4.30E-70 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00090 | K09873 | - | jre:109009497 | 347.051 |