Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00096 ATGAGTTATCTCTATCTCAGTGGAAAAATTCCAGATTTTTCACTCTTGAAATCTCTTCGGATGCTTGACCTGTCTTATAATTACCTAACTCCGTTAACTTTTCAAACAACAAGCTTTACTGGTCCAATACCTCTCTCTTTGATTAAAGGGGGTTTAGTAGAAAGCTTTTCAGGTAACCCAGGGCTTTGCGTCTCAGTCTATCAAGAGTCATCAGGTCAAAACTTCCCCATGTGTACACAAACTTACAACCGAAAGAGGCTTAGTTTCATCTGGGCAATTGTAGTTTCAATTGTAGTAACCTTTATTGGAGCTGCCCTGTTTCTAAAACATTGGTTCAGCAAGAAAAGAGAAATAATGGAACGTGATGAAACACTGTCATCATCTTTTTACTCATATGAGGTCAAGAGCTTCCATCGAATAACTTTTGACCAACGTGAGATATTTGAAGCCATGGTTGACAAGAACGTTGTGGGGCACGGTGGATCTGGGACAGTGTATAAGATTGAATTGAGCACTGGGGATGTAATTGCAGTAAAAAGGCTATGGAGTCGAAAGACAAAAGATTTGCCATTTGATGATCAGCTGCTTTTAGACAAGGAGTTAAAAACTGAGGTGGAGACTCTTGGAAATATAAGGCATAAAAACATAGTCAAACTGTACAGTTACATCTCAAGCCTGAATTGCAGCCTATTGGTTTACGAATACATGACAAACGGTAACCTTTGGGATGCCCTCCATAAAGGGTGGATCCATCTGGACTGGTGTACTCGGCATCAAATTGCACTCGGCCTATCTGAGGGTTTAGCTTACCTCCACCATGATTTGATGCCCCCTATCATTCACAGAGACATTAAAACCACAAATATCCTACTCGACACAAATTACCAGCCAAAGCTTGCAGATTTTGGCATAGCCAAAGTTTTGCAAGCTAGAGGAGGTAAGGACTCAACCACTACAATTGTTGCAGGAACTTATGGCTATTTGGCACCTGAGTATGCGTATTCCTCCAAAGCAACAACTAAGTGTGACGTCTACAGTTTTGGAGTAGTATTGATGGAATTAGTCACGGGAAAGAAGCCAGTAGAGGCAGAGTTCGGGGACAGCAAAAATATCATTTGCTGGGTTGCTAGCATAGTGAATACCCAAGAAGGAACTATCGCAGTTTTAGACAAGCGGTTATCAGGGTCATTCAAGGAGATGATCCAGGTTCTTCGAATCGCTATCCTCTGCACTTACAAAAATCCAGTGCTTCGCCCAACCATGAGAGAGGTGGTTCAATTGCTAACTGAGGCAGCTCCTCGCAAATTAGATTCTTGCACGATATCAAATAATAATAAAGATATGCCACATAATACTAAGATGAAAGCTCATTATTAG 1377 41.18 MSYLYLSGKIPDFSLLKSLRMLDLSYNYLTPLTFQTTSFTGPIPLSLIKGGLVESFSGNPGLCVSVYQESSGQNFPMCTQTYNRKRLSFIWAIVVSIVVTFIGAALFLKHWFSKKREIMERDETLSSSFYSYEVKSFHRITFDQREIFEAMVDKNVVGHGGSGTVYKIELSTGDVIAVKRLWSRKTKDLPFDDQLLLDKELKTEVETLGNIRHKNIVKLYSYISSLNCSLLVYEYMTNGNLWDALHKGWIHLDWCTRHQIALGLSEGLAYLHHDLMPPIIHRDIKTTNILLDTNYQPKLADFGIAKVLQARGGKDSTTTIVAGTYGYLAPEYAYSSKATTKCDVYSFGVVLMELVTGKKPVEAEFGDSKNIICWVASIVNTQEGTIAVLDKRLSGSFKEMIQVLRIAILCTYKNPVLRPTMREVVQLLTEAAPRKLDSCTISNNNKDMPHNTKMKAHY 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 841950 844676 - Bma014551.2 Bma02g00096 77346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00096 458 ProSiteProfiles Protein kinase domain profile. 151 432 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00096 458 MobiDBLite consensus disorder prediction 439 458 - -
Bma02g00096 458 Gene3D Ribonuclease Inhibitor 1 74 IPR032675 -
Bma02g00096 458 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 32 453 - -
Bma02g00096 458 Gene3D Phosphorylase Kinase; domain 1 124 235 - -
Bma02g00096 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Bma02g00096 458 SMART serkin_6 151 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00096 458 SUPERFAMILY Protein kinase-like (PK-like) 138 428 IPR011009 -
Bma02g00096 458 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 32 453 - -
Bma02g00096 458 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524
Bma02g00096 458 Gene3D Transferase(Phosphotransferase) domain 1 236 454 - -
Bma02g00096 458 Pfam Protein kinase domain 153 426 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02569 Bma02g00096 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00096 Bma-Chr2:841950 Bma10g00709 Bma-Chr10:10776543 6.27E-103 dispersed
Bma15g01096 Bma-Chr15:43629790 Bma02g00096 Bma-Chr2:841950 1.24E-94 wgd
Bma02g00096 Bma-Chr2:841950 Bma04g00422 Bma-Chr4:3406792 1.42E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66326 PF00069 Pkinase 1.10E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00096 - - pop:7488181 662.144