Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00103 ATGGTGGTGAGGAAAGTGGGGAAGTATGAGGTGGGTAGGACGATCGGGGAGGGAACATTTGCTAAGGTGAAGTTTGCTCAGAACACGGAGACCGGCGAGAGTGTCGCTATGAAAGTTCTCGACCGGAGCACCATCATCAAGCACAAAATGGCGGACCAGATAAAAAAGGAGATATCCATTATGAAGCTTGTCAGACACCCTTATGTTGTTCGTCTTCACGAGGTTCTTGCTAGCCGCACGAAGATATATATTATCTTAGAGTTCATTACAGGCGGTGAACTATTTGATAAAATAATTCATAAAGGGCGTCTTAGTGAAGCTGAGTCGAGGAGATACTTCCAACAGCTTGTTGACGGTGTCGATTACTGCCACAGCAAGGGAGTATACCACAGAGATTTGAAGCCTGAAAATCTTCTTCTTGATTCCCAAGGTAATTTGAAGATTTCAGACTTTGGTCTTAGTGCATTGCCTGAAGAAGGAGTTAGCTTACTTCGAACAACTTGTGGAACTCCAAATTATGTTGCTCCAGAGGTGCTTGGTCACAAAGGTTATGATGGTACCAAGGCAGACATTTGGTCCTGTGGGGTAATTCTTTATGTACTGATGGCTGGATATCTTCCATTTGATGAGCTTGATCTCACCACGCTATATAGTAAGGTTGAAAATGCCGATTTTTCATGTCCATCCTGGTTTCCCGTCGGAGCGAAATCTCTAATCCATAGAATTTTGGATCCAAATCCTGAAACTCGAATCTCAATTGATCAGATCAGGGAGGATGAATGGTATAAGAAAGGTTATGATCCTGTCAGACTTTTTGAATACGAAGATGTAAATCTGGACGATGTAAACGCCGTTTTTGATGACCCCGAGGAACAAAGGCCCGACGAGGAAGAACTTGGGAGTGAGGACCGGGGCCCTCTTAATCTTAATGCATTTGACTTAATAATTTTATCTCAAGGATTAAATCTTGCAACTCTGTTTGACCGTGGCCAGGACTCTATAAAGTATCAGACTCGCTTTGTCTCTCAGAAGCCGGCAAATGTGATATTATCGACCATGGAAGTCGTTGCTCAATCGATGGGTTTTAAGACGCATATTCGAAATTACAAGATGAGAGTTGAAGGGTTATCATCGGGTAAAACATCTCATTTCTCGGTTATTCTTGAGATTTTTGAAATTGCACCTACTTTCATCATGGTAGACATTCAAAGAGTGGTTGGAGATGCTAGTGAGTACCTCAAGTTCTTCAAGAACTTTTGTGGTAATCTCGAGGATATCATATGGAAACCGCCAAATGAGACGAGCAAAACAAGAACCCCAAGAACAAAGACCAAAAAACATTGA 1344 42.34 MVVRKVGKYEVGRTIGEGTFAKVKFAQNTETGESVAMKVLDRSTIIKHKMADQIKKEISIMKLVRHPYVVRLHEVLASRTKIYIILEFITGGELFDKIIHKGRLSEAESRRYFQQLVDGVDYCHSKGVYHRDLKPENLLLDSQGNLKISDFGLSALPEEGVSLLRTTCGTPNYVAPEVLGHKGYDGTKADIWSCGVILYVLMAGYLPFDELDLTTLYSKVENADFSCPSWFPVGAKSLIHRILDPNPETRISIDQIREDEWYKKGYDPVRLFEYEDVNLDDVNAVFDDPEEQRPDEEELGSEDRGPLNLNAFDLIILSQGLNLATLFDRGQDSIKYQTRFVSQKPANVILSTMEVVAQSMGFKTHIRNYKMRVEGLSSGKTSHFSVILEIFEIAPTFIMVDIQRVVGDASEYLKFFKNFCGNLEDIIWKPPNETSKTRTPRTKTKKH 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 933229 936719 + Bma014557.2 Bma02g00103 77353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00103 447 Gene3D Kinase associated domain 1, KA1 303 429 - -
Bma02g00103 447 ProSiteProfiles Protein kinase domain profile. 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00103 447 Pfam NAF domain 306 364 IPR004041 GO:0007165
Bma02g00103 447 ProSiteProfiles NAF domain profile. 304 328 IPR018451 GO:0007165
Bma02g00103 447 PANTHER - 2 444 - -
Bma02g00103 447 SMART serkin_6 9 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00103 447 ProSitePatterns Protein kinases ATP-binding region signature. 15 47 IPR017441 GO:0005524
Bma02g00103 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 2 444 - -
Bma02g00103 447 CDD CIPK_C 310 420 - -
Bma02g00103 447 SUPERFAMILY Protein kinase-like (PK-like) 6 283 IPR011009 -
Bma02g00103 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Bma02g00103 447 Gene3D Transferase(Phosphotransferase) domain 1 3 302 - -
Bma02g00103 447 Pfam Protein kinase domain 9 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00103 Bma-Chr2:933229 Bma11g00814 Bma-Chr11:25073133 0 dispersed
Bma02g00103 Bma-Chr2:933229 Bma14g00807 Bma-Chr14:9006692 5.04E-176 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66327 PF00069 Pkinase 1.00E-71 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00103 - - tcc:18591854 787.334