Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00120 ATGGCGCCCAGCTATGATTCTGGATTTTCAAGCCTTTTATGTGCAGAGGACTACACCATTTTCGATAATAACGAGTATGGAGGTGCGGCGGAGGAGGCGGAGGAGGCTACGTGGCCTCGTCCGAACCACCGCACTCATTATCAGAATCAGAGCTCTAATGGCGAAATTTTGCCATTGCCGAGCGGCGAGTTCTTGAGTCTGATGATTGAGCAGGAATGCCATCATCTACCTCGGAGTGATTATTTGAAGAGGTTAAGAGATTCAGATCAAGACCTCATGGCTAGACAAGAAGCCGTGGATTGGATAATAAAGGTTGGAGCTCATTTTACTTTTGGACCTCTCTCTACGTACTTGGCCATAAATTACTTGGATCGATTTCTTTCGACTTACGAATTACCTAAAGGAAAAGCTTGGACTATGCAATTGCTATCTGTGGCTTGTTTATCTCTTGCAGCGAAATTGGAGGAGACTCAAGTTCCACTCTCTCTAGATTTGCAGGTGGGCGAATCCAAGTTCATCTTTGAATCACGAACCATTCAAAGAATGGAGCTTCTGGTTTTGAGCACTCTAAAGTGGAGAATGCAGTCTATTACTCCATTTTCCTTCATAGACTATTATCTTCACACGATTCTTGAAGATCGACTCTTACTTCAATCGTCAATCGTCCGATCGATTCAACTCTTTTCGACCACTATGCGAGATATTGAGTTCTTGGAATTCAGACCATCAGAGATTGCAGCTGCAGTGGCTATATCTGTTGCTGGGGAGACCCAAACGGTGGATGTTGAAAAAGCAATTTGTCTGCTTACTCAGAATACCCAGGAGGAAAGAGTTGTAAAGTGCATTAAATTGATGGAGAGGGAGTCATTAATTTGTAATGGTTCAGTTCTTGATCCACAAAGTCCAAATGGGGTGCTGGAAATCGCCTGTTTAAGCTACAGAAGTGATGAAACAGGAGGCGTGTTGTACGAGAGCTCTTCCCACGGCAGCCCGGTCGCCGCCATGTCCAAGAGGCGGAGGCTGAACAGAGCCTGCGATGTGGAGCTGTAA 1050 45.33 MAPSYDSGFSSLLCAEDYTIFDNNEYGGAAEEAEEATWPRPNHRTHYQNQSSNGEILPLPSGEFLSLMIEQECHHLPRSDYLKRLRDSDQDLMARQEAVDWIIKVGAHFTFGPLSTYLAINYLDRFLSTYELPKGKAWTMQLLSVACLSLAAKLEETQVPLSLDLQVGESKFIFESRTIQRMELLVLSTLKWRMQSITPFSFIDYYLHTILEDRLLLQSSIVRSIQLFSTTMRDIEFLEFRPSEIAAAVAISVAGETQTVDVEKAICLLTQNTQEERVVKCIKLMERESLICNGSVLDPQSPNGVLEIACLSYRSDETGGVLYESSSHGSPVAAMSKRRRLNRACDVEL 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1139056 1140857 + Bma014575.3 Bma02g00120 77370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00120 349 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 1 332 - -
Bma02g00120 349 Pfam Cyclin, C-terminal domain 197 287 IPR004367 -
Bma02g00120 349 Gene3D - 67 282 - -
Bma02g00120 349 SUPERFAMILY Cyclin-like 62 194 IPR036915 -
Bma02g00120 349 Gene3D - 78 195 - -
Bma02g00120 349 Pfam Cyclin, N-terminal domain 65 194 IPR006671 -
Bma02g00120 349 SUPERFAMILY Cyclin-like 179 287 IPR036915 -
Bma02g00120 349 CDD CYCLIN 95 187 IPR013763 -
Bma02g00120 349 PANTHER CYCLINS 1 332 IPR039361 -
Bma02g00120 349 SMART Cyclin_C_2 197 314 IPR004367 -
Bma02g00120 349 SMART cyclin_7 100 188 IPR013763 -
Bma02g00120 349 MobiDBLite consensus disorder prediction 31 53 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02590 Bma02g00120 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00120 Bma-Chr2:1139056 Bma14g01747 Bma-Chr14:37599007 3.49E-54 dispersed
Bma03g01204 Bma-Chr3:18562205 Bma02g00120 Bma-Chr2:1139056 1.44E-36 dispersed
Bma05g00646 Bma-Chr5:37998883 Bma02g00120 Bma-Chr2:1139056 3.88E-37 transposed
Bma01g02590 Bma-Chr1:83529174 Bma02g00120 Bma-Chr2:1139056 8.81E-102 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00120 K18810 - zju:107406252 411.379