Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00169 ATGGAGAATGGTTCAGTGGTACTGGCTGATAGTCCACCTTCAACCCCTCTCAGAAAGATTATTATGGTCTCCGCCATTGCTGCTGGTGTTCAATTTGGATGGGCTCTCCAGCTCTCCCTCTTAACTCCATACGTTCAGCAATTAGGAGTTTGGACGTCATTCATCTGGCTCTGCGGTCCAATTTCTGGTTTATTAGTTCAGCCTATCGTTGGCTACTACAGTGATCGGTGCACTTCCCGGATAGGTCGTCGCCGCCCGTTCATGATTGGCGGCGCGTTCTTCGTCGCCCTCTCTGTTTTCCTTATTGGCTTTGCTGCCGACATCGGTCATGCTCTTGGCGACAATCTATCCAAGTCTATGAAACCGCGCGCCGTCGCCATTTTTGTTGTTGGTTCTTGGATCCTCGACGTTGCTAACAACATGTTGCAAGGACCATGTAGAGCTTTTCTGGCTGATCTCTCAGGTAGCGACCACAGGAAAGTGAGGCTCTCTAATGGCTTCTTCGCTTTCTTCATGGCCGTCGGAAATTTTTTGGGTTACGTGAATTACAGTGTTCCATGGGCTCTGGCATCCATCTACTCCGAGAGTTGCGGCGCTGGCCAAGGGCTTTCTGTGGGACTGCTGAACCTGGTCGTCGTCATCCCACAGATGATCGTGTCGATGGTGAGCGGTCCACTGGATGCAGCGTTCGGGGGCGGAAACTCAGCGGCGTTCGTGATGGGCGGCGTAGCAGCGGCAGTAAGCGCGGTGTTGGCACTGACGATTCTTCCGAAAACACAGAGGCAATCCAGCTCCTCCTTGATCATGGGAGGACATTAA 819 52.5 MENGSVVLADSPPSTPLRKIIMVSAIAAGVQFGWALQLSLLTPYVQQLGVWTSFIWLCGPISGLLVQPIVGYYSDRCTSRIGRRRPFMIGGAFFVALSVFLIGFAADIGHALGDNLSKSMKPRAVAIFVVGSWILDVANNMLQGPCRAFLADLSGSDHRKVRLSNGFFAFFMAVGNFLGYVNYSVPWALASIYSESCGAGQGLSVGLLNLVVVIPQMIVSMVSGPLDAAFGGGNSAAFVMGGVAAAVSAVLALTILPKTQRQSSSSLIMGGH 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1489160 1490919 + Bma014624.1 Bma02g00169 77419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00169 272 Pfam MFS/sugar transport protein 50 179 - -
Bma02g00169 272 Gene3D MFS general substrate transporter like domains 17 194 IPR036259 -
Bma02g00169 272 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 13 181 - -
Bma02g00169 272 SUPERFAMILY MFS general substrate transporter 18 263 IPR036259 -
Bma02g00169 272 PANTHER SUGAR TRANSPORTER 13 181 - -
Bma02g00169 272 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 181 263 - -
Bma02g00169 272 PANTHER SUGAR TRANSPORTER 181 263 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02572 Bma02g00169 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00169 Bma-Chr2:1489160 Bma02g00180 Bma-Chr2:1636296 6.94E-45 dispersed
Bma02g00169 Bma-Chr2:1489160 Bma01g02572 Bma-Chr1:83321177 1.25E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00169 K15378 - pop:18104481 281.182