Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00180 ATGGAGAATGGTTCAGTGGTACTGGCTGATAGTCCACCTTCAACCCCTCTCAGAAAGATTATTATGGTCTCTGCCATTGCTGCTGGTGTTCAATTTGGATGGGCTCTCCAGCTCTCGCTCTTAACTCCCTACGTTCAGCAATTAGGAGTTCCCCACATTTGGACGTCATTCATCTGGCTCTGCGGTCCAATTTCTGGTTTATTAGTTCAGCCTATCGTTGGCTACTACAGTGATCGGTGCACTTCCCGGATAGGTCGTCGCCGCCCGTTCATGATTGGCGGCGCGTTCTTCGTCGCCCTCTCTGTTTTCCTTATTGGCTTTGCTGCCGACATCGGTCATGCTCTTGGCGACAATCTATCCAAGTCTATGAAACCGCGCGCCGTCGCCATTTTTGTTGTTGGTTCCTGGATCCTCGACGTTGCTAACAACATGTTGCAAGGACCATGTAGAGCTTTTCTGGCTGATCTCTCAGGTAGCGACCACAGGAAAGTGAGGCTCTCTAATGGCTTCTTCGCTTTCTTCATGGCCGTCGGAAATTTTTTGGGTTACGGTGCTGGTTCATATGGCGGCCTCCACAAGTTCCTCCCTTTCACCGAGACAAAAGCCTGCGACGTTAACTGTGCGAATCTAAAAACGTGCTTCATCATCGAAATCCTCCTCCTCGGCATCGTGACAGTGTTCGCCGTTTCGACGGTGAGCGAGATTCCGTTGGTTAAGAAAAAGGACAAGGAGGAATCAGAACTGTTCTTCAAGCAATTGTGGACGGCGTTCAAGCAGCTTTCTAGACCCATGTGGATTCTCTTCCTCGTGACTGCTTTCAACTGGATCGCCTGGTTCTCATTCCTGTTGTATGACACGGACTGGATGGGTTTGGACGTGTACGGAGGAAAGCCGACGGGGACGGCGCAAGAAGTGAGGATTTATGATATGGGTGTGCGAGCTGGGGCTCTAGGTTTGGTGATTAACTCCATTGTTTTGGGTTTTGCATCGCTCGCCGTGGAGCCCATTAGCGGGGCTTTGAAGGGTGCGAAGAACTGGTGGGGAATTGTTAACTTAATCCTAGCCATCTCCATGTGTATGACCGTGTTTGTGAGTGAGGCTGCCCAGCAGTGGAGGTCGGCCAATGGCCTCCACCCTCCTCCGTCTCATATTAAAGCTGGAGCATTCACCATCTTTGCTATTCTGGGCATTCCTCTTTCGGTGAATTACAGTGTTCCATGGGCTCTGGCATCCATCTACTCCGAGAGTTGCGGCGCTGGCCAAGGGCTTTCTGTGGGACTGCTGAACCTGGCCGTCGTCATCCCACAGATGATCGTGTCGATGGTGAGCGGTCCACTGGATGCAGCGTTCGGGGGCGGAAACTCAGCGGCGTTCGTGATGGGCGGCATAGCAGCGGCAGTAAGCGCGGTGTTGGCACTGACGATTCTTCCGAAAACACAGAGGCAATCCAGCTCCTCCTTGATCATGGGAGGACATTAA 1479 52.13 MENGSVVLADSPPSTPLRKIIMVSAIAAGVQFGWALQLSLLTPYVQQLGVPHIWTSFIWLCGPISGLLVQPIVGYYSDRCTSRIGRRRPFMIGGAFFVALSVFLIGFAADIGHALGDNLSKSMKPRAVAIFVVGSWILDVANNMLQGPCRAFLADLSGSDHRKVRLSNGFFAFFMAVGNFLGYGAGSYGGLHKFLPFTETKACDVNCANLKTCFIIEILLLGIVTVFAVSTVSEIPLVKKKDKEESELFFKQLWTAFKQLSRPMWILFLVTAFNWIAWFSFLLYDTDWMGLDVYGGKPTGTAQEVRIYDMGVRAGALGLVINSIVLGFASLAVEPISGALKGAKNWWGIVNLILAISMCMTVFVSEAAQQWRSANGLHPPPSHIKAGAFTIFAILGIPLSVNYSVPWALASIYSESCGAGQGLSVGLLNLAVVIPQMIVSMVSGPLDAAFGGGNSAAFVMGGIAAAVSAVLALTILPKTQRQSSSSLIMGGH 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1636296 1638044 - Bma014637.1 Bma02g00180 77430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00180 492 SUPERFAMILY MFS general substrate transporter 18 482 IPR036259 -
Bma02g00180 492 Gene3D MFS general substrate transporter like domains 15 479 IPR036259 -
Bma02g00180 492 TIGRFAM GPH_sucrose: sucrose/H+ symporter 16 480 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bma02g00180 492 Pfam MFS/sugar transport protein 32 277 - -
Bma02g00180 492 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 13 483 - -
Bma02g00180 492 PANTHER SUGAR TRANSPORTER 13 483 - -
Bma02g00180 492 CDD MFS_SLC45_SUC 20 460 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00169 Bma-Chr2:1489160 Bma02g00180 Bma-Chr2:1636296 6.94E-45 dispersed
Bma02g00180 Bma-Chr2:1636296 Bma14g00823 Bma-Chr14:9157942 0 dispersed
Bma02g00180 Bma-Chr2:1636296 Bma02g00182 Bma-Chr2:1672324 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00180 K15378 - csv:116401998 676.396