Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00182 TTATCTAACATGGGGAGTGATTCAGTTGTCCAGGCCGATATTCAGGCTTCAAGCTCTCTGGGCAAGATTATTGTCGTCTCTGCCATTGCAGCCGGTGTTCAGTTCGGATGGGCTCTCCAGCTCTCGCTGTTAACTCCCTACGTTCAGCAATTAGGAGTTCCCCACACTTGGGCGGCATTCATCTGGCTTTGTGGTCCCATTTCTGGTTTATTGGTTCAGCCCATTGTTGGCTACTACAGTGATCGGTGCACTTTACGGATAGGTCGTCGCCGTCCGTTCATCATTGGCGGCGCAGCCTTCGTCGCCCTTGCTGTTTTCCTTATTGGCTTCGCTGCTGACATCGGTCATGTTGCTGGGGACGATCTATCGAAGTCGACAAAGCCACGCGCCGTCGCCATTTTCGTTGTCGGTTTCTGGGTCCTCGACGTTGCTAACAATATGTTGCAAGGACCTTGCAGAGCTTTTCTGGCTGATCTTTCCGGTAGCGACCACAAGAAAATGGCCCTCTCTAATGGTTTCTTCGCTTTCTTCATGGCTGTCGGAAACATTTTGGGTTACGCAGCCGGTTCGTACGACGCCCTCCATAAGTTCCTCCCCTTCACGGAGACAAAAGCATGTGATGTTTACTGCGCAAATCTGAAATCGTGCTTCATCATCGACATCATCCTCCTCATCGCCGTGACAGTGTTTGCCGTTTCGACGGTGAGCGAGACTCCGTTCGAGAGGAAGGCGGAAGACGAGGAATCAAACTTGTTCTTCACCCAATTGTCGACGGCGTTCAAGCAACTTTCTAGACCCATGTGGCTTCTCTTTCTTGTGACTGCTCTGAATTGGATCGCTTGGTTCCCCTTCCTGTTGTTTGACACAGACTGGATGGGTCTGGAAGTGTACGGAGGAAAAGCAAAGGGGACGACGCAAGAAGTGAAGATTTATGATCTTGGTGTGCGAGCTGGATCTCTAGGTTTGATGATCAACTCCATTGTTCTGGCTTTCGCATCACTCGCCGTCGAGCCCATTGGTCGGGCTTTGAAGGGCGTGAAGAATTGGTGGGCGATTGTTAACATTATCTTGGCCATCTCCATGGGTATGACTGTTGTTGTGACGAAGGTCGCTGAAAATTGGAGGTCTACCAATGGCCTTCAACCTCCTCCCTCTAACATTAAAGCTGGAGCATTGGCCATCTTTGCCATTCTAGGCATTCCTCTTTCGGTGAATTACAGTGTTCCGTGGGCTTTGGCATCCATCTACTCCGTCACTTGCGGCGCTGGCCAAGGACTCTCTCTAGGACTGTTGAACTTGGCCATCGTCATTCCACAGATGATCGTGTCTGTGGTGAGCGGTCCTCTGGACGCAGCGTTCGGCGGGGGAAACTCAGCGGCGTTCGTGATGGGCGGCATAGCAGCAGCCGTCAGCGCGGTTCTGGCTCTGACGATTCTTCCGAGAACACCGAGGCAGTCAAGCTCCTTCTTGAGCATGGGAGGACATTAG 1488 51.88 LSNMGSDSVVQADIQASSSLGKIIVVSAIAAGVQFGWALQLSLLTPYVQQLGVPHTWAAFIWLCGPISGLLVQPIVGYYSDRCTLRIGRRRPFIIGGAAFVALAVFLIGFAADIGHVAGDDLSKSTKPRAVAIFVVGFWVLDVANNMLQGPCRAFLADLSGSDHKKMALSNGFFAFFMAVGNILGYAAGSYDALHKFLPFTETKACDVYCANLKSCFIIDIILLIAVTVFAVSTVSETPFERKAEDEESNLFFTQLSTAFKQLSRPMWLLFLVTALNWIAWFPFLLFDTDWMGLEVYGGKAKGTTQEVKIYDLGVRAGSLGLMINSIVLAFASLAVEPIGRALKGVKNWWAIVNIILAISMGMTVVVTKVAENWRSTNGLQPPPSNIKAGALAIFAILGIPLSVNYSVPWALASIYSVTCGAGQGLSLGLLNLAIVIPQMIVSVVSGPLDAAFGGGNSAAFVMGGIAAAVSAVLALTILPRTPRQSSSFLSMGGH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1672324 1674073 + Bma014639.1 Bma02g00182 77432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00182 495 TIGRFAM GPH_sucrose: sucrose/H+ symporter 19 483 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bma02g00182 495 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 15 486 - -
Bma02g00182 495 SUPERFAMILY MFS general substrate transporter 24 485 IPR036259 -
Bma02g00182 495 CDD MFS_SLC45_SUC 23 463 - -
Bma02g00182 495 Pfam MFS/sugar transport protein 36 280 - -
Bma02g00182 495 PANTHER SUGAR TRANSPORTER 15 486 - -
Bma02g00182 495 Gene3D MFS general substrate transporter like domains 19 480 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00182 Bma-Chr2:1672324 Bma14g00823 Bma-Chr14:9157942 0 dispersed
Bma02g00180 Bma-Chr2:1636296 Bma02g00182 Bma-Chr2:1672324 0 proximal
Bma02g00182 Bma-Chr2:1672324 Bma02g00183 Bma-Chr2:1679902 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00182 K15378 - csv:116401998 703.36