Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00183 ATGGAGAATGGTTCGGTTGTACAGGCGGATATTCCAGCTTCAAGCCCTCTCAGTAGAATTATCGTCGTTTCCGCCATTGCTGCAGGTGTTCAATTCGGATGGGCTCTTCAGCTCTCTCTGTTAACTCCCTACGTTCAGCTATTAGGAGTTCCGCATACTTGGGCGGCGTTCATCTGGCTATGCGGTCCTATTTCGGGTTTATTGGTTCAGCCCATCGTTGGCTACTACAGTGATCGGTGTACTTCACGGATAGGTCGTCGCCGTCCGTTCATTATCGCCGGAGCGGCCTTCGTCGCCCTTGCTGTTTTCCTTATTTGCTTCGCTGCCGACATTGGCCATGTTGCGGGCGATGATCTATCGAAGTCAACAAAGCCACGAGCTGTTGCCGTTTTCGTCGTCGGTTTTTGGGTGCTCGACGTGGCTAACAACATGTTGCAAGGACCTTGCAGAGCTTTTCTGGCTGATCTTTCCGGTAATGATCATAGGAAAATGAGCCTCTCTAATGGGTTCTTCTCCTTCTTCATGGCTGTCGGAAATATTCTGGGTTACGCAGCTGGTTCGTACAGCGGCCTCCATAAGTTCCTTCCCTTCACAAAAACAAAAGCCTGCGACGTTTACTGTGCGAATCTCAAATCTTGCTTCATCATCGACATCTTCCTCCTCATCACCGTGACAGTGTTTGCTGTTTCGATGGTTAGAGAGATTCCGTTAGAGAAGGAGGAGCGCGACGAGGAATCAAAGTTGTTCTTCCGCCAGCTGTCGACGGCGTTCAAGCAGCTTTCTAGACCCACGTGGATTCTCTTCCTCGTGACTGCTTTCAACTGGATCGCCTGGTTCCCCTTCCTGTTGTTCGACACAGACTGGATGGGTCTGGAAGTGTACGGAGGAAAGCCGAAAGGGACGGCGGAGGAAGTGAAGATTTATGATCTCGGTGTGCGAGCTGGGGCTCTAGGTCTGATGATTAACTCCATTGTTCTGGCCTTTGCATCTCTTGCCGTCGAGCCCATTGGTCGTGCGCTGAAGGGCGTGAAGAATTGGTGGGCGGTTGTTAACTTTATCCTGGCCATCTCCATGGGTATGACTGTGGTTGTGACTAAGGTTGCAGAGAAATGGAGGTCTGTCAATGGCCTCCACCTTCCCCCCTCTGACATTAAAGCAGGAGCGTTGGCCATCTTTGCAATTCTGGGCATTCCTCTTTCGGTGAATTTCAGTGTTCCGTGGGCTTTGGCGTCCATCTACTCCGTCACTTGCGGTGCTGGCCAAGGTCTTTCTCTCGGAATGTTGAACTTGGCCATCGTCATCCCGCAGATGTTCGTGTCGGTGGTGAGCGGTCCTCTAGACGCAGCCTTCGGTGGCGGCAACTCGCCGGCGTTTGTGATGGGCAGCATTGCAGCGGCGGTGAGCGCAGTTCTGGCTCTGACGATTCTTCCAAAAATGCCGAGACAAACGAGCTCCTTCTTGGGCATGGGAGGACATTGA 1479 52.2 MENGSVVQADIPASSPLSRIIVVSAIAAGVQFGWALQLSLLTPYVQLLGVPHTWAAFIWLCGPISGLLVQPIVGYYSDRCTSRIGRRRPFIIAGAAFVALAVFLICFAADIGHVAGDDLSKSTKPRAVAVFVVGFWVLDVANNMLQGPCRAFLADLSGNDHRKMSLSNGFFSFFMAVGNILGYAAGSYSGLHKFLPFTKTKACDVYCANLKSCFIIDIFLLITVTVFAVSMVREIPLEKEERDEESKLFFRQLSTAFKQLSRPTWILFLVTAFNWIAWFPFLLFDTDWMGLEVYGGKPKGTAEEVKIYDLGVRAGALGLMINSIVLAFASLAVEPIGRALKGVKNWWAVVNFILAISMGMTVVVTKVAEKWRSVNGLHLPPSDIKAGALAIFAILGIPLSVNFSVPWALASIYSVTCGAGQGLSLGMLNLAIVIPQMFVSVVSGPLDAAFGGGNSPAFVMGSIAAAVSAVLALTILPKMPRQTSSFLGMGGH 492
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1679902 1681645 + Bma014640.1 Bma02g00183 77433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00183 492 CDD MFS_SLC45_SUC 20 463 - -
Bma02g00183 492 PANTHER SUGAR TRANSPORTER 13 484 - -
Bma02g00183 492 Pfam MFS/sugar transport protein 32 277 - -
Bma02g00183 492 PANTHER SUCROSE TRANSPORT PROTEIN SUC2-LIKE 13 484 - -
Bma02g00183 492 Gene3D MFS general substrate transporter like domains 17 476 IPR036259 -
Bma02g00183 492 TIGRFAM GPH_sucrose: sucrose/H+ symporter 16 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Bma02g00183 492 SUPERFAMILY MFS general substrate transporter 20 482 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02572 Bma-Chr1:83321177 Bma02g00183 Bma-Chr2:1679902 5.79E-153 dispersed
Bma02g00183 Bma-Chr2:1679902 Bma14g00823 Bma-Chr14:9157942 0 dispersed
Bma02g00182 Bma-Chr2:1672324 Bma02g00183 Bma-Chr2:1679902 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00183 K15378 - tcc:18593136 689.878