Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00195 ATGGGAGTAGCAGAAAAGCTTCTGCAACTGGCGCATATCGCCATCCTTCTGCCAGCTCTACTGGCAATCAATCATTTGCCTGGTTGCCCTAACGAGTGCGGGGATTTAACAGACATTCCCTACCCTTTCGGAATCGGAGAAAACTGTTATCTGAATCAAAACTTCTCAATCGAATGCAATCGAACCTACGATCCTCCACGAGCTTTCTGGCTGAGCAGTAGTTCGAATGTAAACATCACAAACATTTCCGTCGTCAACAGTGAATTTCAGATCATGCTCTATGTATCCTACGACTGCTATGAAAAAGGTGGGGTTCTGTCTGAACAAATGAACTTTTCTCTCAACATCCCAAGCCCGTTCACCATCTCCAACACTATGAACAAGTTTACAGTCATGGGGTGCGATTCTTACGCTTACATCACCGGCACAGATTACTCCAGCGGCTGCATGTCTCTATGTTCGACCAACACGACATTGAAAGATGGGCCGTGTTCTGGAGTCGGGTGTTGCCAAGTGGACATTCCAGAGGGTTTGAACTTCGTAAGATTGGAAGTGAAAAGCTTTTATAATCACACTAATGTTACGGATTTCAATCCTTGTGGGTATGCTTTTCTGGTGGAGGAAAATAAGTTTAGTTTTCGTACGAGTTACCTGAGTAATTTTCCGGAGGTCCTGGTGCCGGCGGTGCTCAATTGGGCCATAAAGAACGATACTTGTGAATCGGCGGCCAACAAGACGAGTTGTATCTGTGGAGGAAACACCACCCTCGTACCCATCGCAGGTGAAGGATCGGACTATCGTTGCCAGTGCTGGGATGGCTATGAGGGAAATCCTTATCTTCCTCTGGGTTGCCAAGATATTGATGAGTGTAAAAATAATAGCACAAACAAGTGCAAGTACAAGTGCACAAACACACCTGGAAATTATACTTGTCCATGCAAAAAGGGTTACAATGGAGATGCAAGGGTTGGTGGAGAAGGCTGCACCCACAAACCCTCTTTTCTGATTCAGATCATAGTTGGAATTGGGATTGGACTTGCAGTATTGATCGTGGGAACTAGCTGGCTATACTTGGGCTACAAAAAATGGAAACTAATCAAGCTCAAAGAGAAATTCTTCGAAGAAAATGGAGGCTTCATGTTGCAGCAAGAGCTATCTATGCGGCATGGTCGAGAGGCCCACACGGCCAAGATTTTCTCACAGCAGGAGCTCGAGAAGGCCACCGACAAGTTCGACGACGCCGCTGTCATCGGGAAAGGAGGCTACGGAACCGTCTATAGAGGTGTTTTGGAAGATGGTTCAGTTGTGGCTATCAAGAAGTCAAAACTAGTGGATCAAAGTCAAACCCAGCAGTTCGTCAACGAAGTTCTGGTTCTCTCCCAAATCCGCCATAGGAATGTTGTTAAGCTTCTTGGGTGCTGTTTGGAGACTGAAGTTCCTCTTCTTGTTTACGAGTTCGTCAATAACGGAACCCTATTCGATCACATCCATTGTTACGAACGCTACAAATTAGGTCCCCTTTCATGGGTGCTTCGTCTGAAAATTGCTGCAGAAACTGCGGATGTTCTTTCTTACCTTCACTCTTCTGCTTCAACTTCCATTATCCACGGAGACATCAAATCAGCAAACATACTTTTAGACAACGGATTCACTGCAAAAGTTGCAGATTTCGGAGCTTCAAAGTTAGTTCCTTTAGATCACGCAGCGCTTTCAACAATGGTGAAAGGAACTCTAGGGTATTTAGATCCTGAATATTTACTCACTAGCGAATTGACAGAGAAGAGCGATGTCTACAGCTTTGGAATCGTGCTTCTGGAGCTTTTAACAGGGAAGAAGGCAGTTTCTTTCGAAGGGCCAGAAAACGAGAGAAACCTCGCCATGTTTTTCCTCTCCAGCATGAAAGAAGATCGTCTTGTTCGAGTGCTCGATAAGTTTCTGGTTGGGGAGGGAGACATGGTCGAAATGAGAGAAGTTTCTATGCTAGCAAAGACGTGTTTGGCTGTGAAAGGCGATGAAAGGCCATCCATGAGAGAAGTCGCTAGGGTTTTGGGAGAAATGTCGAAAGTGACGAGAGTGGAGCAGCATCCAAGGGAACTAAGGAATGAAGACGAACAAGGCCCAGAAGAACAAACTGCGCGTCTGCTCGGTCAAACTTGTTCCATCGTTGACGATAGCTTGAAGGGTGATCATATGATATCACTTCATGGGAGATGA 2214 45.62 MGVAEKLLQLAHIAILLPALLAINHLPGCPNECGDLTDIPYPFGIGENCYLNQNFSIECNRTYDPPRAFWLSSSSNVNITNISVVNSEFQIMLYVSYDCYEKGGVLSEQMNFSLNIPSPFTISNTMNKFTVMGCDSYAYITGTDYSSGCMSLCSTNTTLKDGPCSGVGCCQVDIPEGLNFVRLEVKSFYNHTNVTDFNPCGYAFLVEENKFSFRTSYLSNFPEVLVPAVLNWAIKNDTCESAANKTSCICGGNTTLVPIAGEGSDYRCQCWDGYEGNPYLPLGCQDIDECKNNSTNKCKYKCTNTPGNYTCPCKKGYNGDARVGGEGCTHKPSFLIQIIVGIGIGLAVLIVGTSWLYLGYKKWKLIKLKEKFFEENGGFMLQQELSMRHGREAHTAKIFSQQELEKATDKFDDAAVIGKGGYGTVYRGVLEDGSVVAIKKSKLVDQSQTQQFVNEVLVLSQIRHRNVVKLLGCCLETEVPLLVYEFVNNGTLFDHIHCYERYKLGPLSWVLRLKIAAETADVLSYLHSSASTSIIHGDIKSANILLDNGFTAKVADFGASKLVPLDHAALSTMVKGTLGYLDPEYLLTSELTEKSDVYSFGIVLLELLTGKKAVSFEGPENERNLAMFFLSSMKEDRLVRVLDKFLVGEGDMVEMREVSMLAKTCLAVKGDERPSMREVARVLGEMSKVTRVEQHPRELRNEDEQGPEEQTARLLGQTCSIVDDSLKGDHMISLHGR 737
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1831481 1834111 + Bma014652.1 Bma02g00195 77445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00195 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 686 IPR045274 GO:0007166
Bma02g00195 737 Pfam Protein kinase domain 413 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00195 737 SUPERFAMILY EGF/Laminin 285 320 - -
Bma02g00195 737 SMART serkin_6 411 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00195 737 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 302 313 IPR000152 -
Bma02g00195 737 SMART egfca_6 286 329 IPR001881 GO:0005509
Bma02g00195 737 ProSitePatterns Calcium-binding EGF-like domain signature. 286 311 IPR018097 GO:0005509
Bma02g00195 737 ProSitePatterns Serine/Threonine protein kinases active-site signature. 534 546 IPR008271 GO:0004672|GO:0006468
Bma02g00195 737 Gene3D Transferase(Phosphotransferase) domain 1 487 706 - -
Bma02g00195 737 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Bma02g00195 737 Gene3D Plasmodium vivax P25 domain 194 332 - -
Bma02g00195 737 ProSiteProfiles Protein kinase domain profile. 411 698 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00195 737 CDD STKc_IRAK 417 686 - -
Bma02g00195 737 SUPERFAMILY Protein kinase-like (PK-like) 395 683 IPR011009 -
Bma02g00195 737 Gene3D Phosphorylase Kinase; domain 1 382 486 - -
Bma02g00195 737 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE ISOFORM X2 26 686 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02428 Bma-Chr1:81951047 Bma02g00195 Bma-Chr2:1831481 1.59E-177 dispersed
Bma02g00195 Bma-Chr2:1831481 Bma14g00234 Bma-Chr14:2834272 2.65E-171 dispersed
Bma02g00199 Bma-Chr2:2134697 Bma02g00195 Bma-Chr2:1831481 4.71E-15 dispersed
Bma04g01006 Bma-Chr4:16670670 Bma02g00195 Bma-Chr2:1831481 9.51E-70 dispersed
Bma02g00195 Bma-Chr2:1831481 Bma02g00198 Bma-Chr2:2113518 3.29E-180 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66329 PF00069 Pkinase 3.60E-45 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00195 - - cmos:111461403 799.275