Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00197 ATGGAATTCAAAAATGGGCTGAAGTATCCGATGAATTTTCTCAGTTCATGGAAAGACTCTGAATCGCCGTGTGAATTCCTGGGAGTTTCTTGTGATCTGATTTCTGGGAAAGTGACAGAAATTCACCTCGAGAACATGGGTCTCTCCGGCGGGATTTCCCCCGCCATTTCAGCGCTGCAGAAGCTTACAACATTTTCGTTGCCTACGAATAATATTTCTGGAGTAATTCCATCCCAGCTGATCAAATGTAGCAATCTTAGAGTATTGAATCTTACTGGAAATGACATGGTTGGAACCATTCCTGATCTTTCTGAACTGAGAAACTTGGAAGTTCTTGATCTGTCCATAAACCACTTCAATGGCGGTTTTCCTTCTTGGGTCGGAGGTTTGACTTCGCTTGTTTCTCTGGGTTTGGGAGAGAATGAGTTCGAGGAGTCTGAAATTCCTGAATCTCTTGGAAATTTGAAGAACTTGACTTGGCTTAATTTGGCGGATTTAAATTTGACCGGAGAAATTCCTGAATCAGTTTATGCAATGAAGGAATTGAAGACGTTGGATATTTCGAGAAACAAAATTTCTGGAAGAATTTCCAAATCCATTTCCAAGTTAGAGAATATCAATAAGATTGAGCTCTACTCGAATAATTTGACCGGAGAAATCCCATCGGAGATTGGAAGTCTTACTCTTCTGCAGGAAATCGACATTTCTGCGAATAAACTGTACGGAAAGTTACCTAGTGAAATTGTAAATCTGAAGAATCTGGTAGTCTTTCAGCTTTATGAAAACAACTTCTCCGGTGTGATTCCGGCAGGTTTTGGAGATTTGCGAAAGCTCATCGGATTTTCTATCTACCGGAATAACTTCGCGGGAGAATTTCCGTCAAATTTTGGCCGGTTTTCACCTCTGAATTATATCGACATCTCTGAGAATCAATTTTCAGGAGTTTTTCCAAAGTTCTTGTGTGAAAATGGAAGTTTACAGTTCTTGCTTGCTCTGGAGAATAACTTCTCAGGAGATTTTCCATATTCCTATGCTGAGTGTAAGTCTCTGGAAAGATTCAGAATCAATAATAATCATTTTTCTGGAAAAATCCCAGATGGGTTATGGGGTCTCCCTTCCGCAAAAATTATTGATTTCAGCGACAATGATTTCAGCGGTGGTATTTCCTCTGAGATAGAACTATCTACCGGTCTGAATCAATTGCTTCTTCAGAATAATCAATTTTCCGGCGATCTTCCATCACAACTTGGCAAGCTGACAAGCTTAGAGAAGCTTCAGCTGAGTGGTAATGAATTTTCTGGTGAAATTCCATCCGATCTTGGTTCTTTGAAGCAGCTATCTTCTCTGTATTTAGAAGATAATCATTTGACCGGATCGATCCCATCGGAGCTAGGTAATTGTGAAAGATTAGTGGACTTAAATCTTGCTCGGAATTCATTGACCGGAAAAATTCCTGAATCAGTTTATGCAATGAAGGAATTGAAGCTGAGTAAGTCTCTTGGAAAGATTCAGAATCAATATAATCATTTTTCTGGAAAAATCCCAGATGGGTTATGGGGTCTCCCTTCCGCAAAAATTATTGATTTCAGCGACAATGATTTCAGCGGTGGTATTTCCTCTGAGATAGAACTATCTACCGGTCTGAATCAATTGCTTCTTCAGAATAATCAATTTTCCGGCGATCTTCCATCACAACTTGGCAAGCTGACAAGCTTAGAGAAGCTTCAGCTGAGTGGTAATGAATTTTCTGGTGAAATTCCATCCGATCTTGGTTCTTTGAAGCAGCTATCTTCTCTGTATTTAGAAGATAATCATTTGACCGGATCGATCCCATCGGAGCTAGGTAATTGTGAAAGATTAGTGGACTTAAATCTTGCTCGGAATTCATTGACCGGAAAAATTCCTGAATCATTTTCATCTATGAGCTCTTTGAACTCGCTAAATCTTTCGATGAACAAACTTAGTGGTTCGATTCCGGAAGATCTAGAAAAGATGAAGTTGAGATCTATCGATTTTTCTGAAAACCAGTTGTCGGGAAAAGCCCCGTTCTATCTTCTGGCCGTGAGTGGCGACAAAGCATTTTTAGGGAACATTGCTCTTTGCCTCAGATTCTTCCATTTTCTCGCAGCTCTGTTCTTTGTTTGCTGTATATTATCTGTATCTGAATCTGTGAATGTGGAGACAAATGCCCTGATGGAATTCAAACATGGGCTGAAGTATCCGATGAATTTTCTCAGTTCATGGAAAGACTCTGAATCGCCGTGTGAATTCCTGGGAGTTTCTTGTGATCTGATTTCTGGGAAAGTGACAGAAATTCACCTCGAGAACATGGGTCTCTCAGGCGGGATTTCCCCCGCCATTTCAGCGCTGCAGAAGCTTACAACATTTTCGTTGCCTACGAATAATATTTCTGGAGTAATTCCATCCCAGCTGATCAAATGTAGCAATCTTAGAGTATTGAATCTTACTGGAAATGACATGGTTGGAACCATTCCTGATCTTTCTGAACTGAGAAACTTGGAAGTTCTTGATCTGTCCATAAACCACTTCAATGGCGGTTTTCCTTCTTGGGTCGGAGGTATGACTTCGCTTGTTTCTCTGTGTTTGGGAGAGAATGAGTTCGAGGAGTCTGAAATTCCTGAATCTCTTGGAAATTTGAAGAACTTGACTTGGCTTAATTTGGCGGATTTAAATTTGACCGGAGAAATTCCTGAATCAGTTTATGCAATGAAGGAATTGACGACGTTGGATATTTCGAAAAACAAAATTTCTGGAAGAATTTCCAAATCCATTTCCAAGTTAGAGAATATCAATAAGATTGAGCTCTTCTCGAATAATTTGACCGGAGAAATCCCATCCGAGATTGGAAGTCTCACTCTTCTGCAGGAAATCGACATTTCTGCGAATAAACTGTACGGAAAGTTACCTGGTGAAATTGTAAATCTGAAGAATCTGGTAGTCTTTCAGCTTTATGAAAACAACTTCTCAGGTGAGATTCCGGCAGGTTTTGGAGATTTGCGAAAGCTCATCGGATTTTCTATCTACCGGAATAACTTCGCCGGAGAATTTCCGCCAAATTTTGGCCGGTTTTCACCTCTGAAGAGTATCGACATCTCTGAGAATCAATTTTCAGGAGTTTTTCCAAAGTTCTTGTGTGAAAATGGAAGTTTACAGTTCTTGCTTGCTCTGGAGAATAACTTCTCAGGAGATTTTCCATATTCCTATGCTGAGTGTAAGTCTCTGGAAAGATTCAGAATCAATAATAATCATTTTTCTGGAAAAATCCCAGATGGGTTATGGGGTCTCCCTTCCGCAAAAATTATTGATTTCAGCGAGAATGATTTCAGCGGTGGTATTTCTTCTGAGATTGAACTATCTACCGGTCTAAATCAAATGCTTCTTCAGAATAATCAATTTTCCGGCGATCTTCCGCCACAACTCGGCAAGCTGACAAGCTTAGAGAAGCTTCAGCTGAGTGGTAATGAATTTTCTGGTGAAATTCCATCCGATCTTGGTTCTTTGAAGCAGCTATCTTCTCTGTATTTAGACGATAATCATTTGACCGGATCGATCCCATCGGAGCTAGGTAATTGTGAAAGATTAGTGGACTTAAATCTTGCTCGGAATTCATTGACCGGAAAAATTCCTGAATCATTTTCATCTATGAGCTCTTTGAACTCGCTAAATCTTTCGATGAACAAACTTAGTGGTTCGATTCCGGAAGATTTAAAAAAGATGAAGCTGAGTTCTATCGATTTTTCTGAAAACCAGTTGTCGGGAAAAGCCCCGTTCGATCTTCTGGCCGTGAGTGGCGACAAAGCATTCTTAAGGAACATTGCTCTTTGCGTTGATAAAAACGACCTCCTCCGCTTGAATTCTAGCCTGGAAATCTGCTCTGAAAACCATTCGAAAGAAAACATTCTTAAAAATAACCTGTTTTTCTTCTGCATAATTGCCTCTGCCTTACTTTTTGTTATACCCGGCTTCCTGCTGGTTTACTCCAAGCTCCATGATCATGACTTGGAAGCTGATTTGGACGGAGAAAAAGAGACTGATTCAAAGTGGAAGCTTTCGTCTTTCCACCCAGTGGAATTCGACTGTGACGAAATATGTAATTTGGAAGAAGCCAATCTGATCGGAAGCGGAGGATCGGGCAGAGTTTATCGAGTCGATTTGAGGAAAAATCGAGGGATGGTGGCTGTTAAACAGCTATGGAAAGGGGATTCGAGGAAGGTGTTCGATGCAGAAATGGCAGCTTTAGGGACAATCCGACATAGAAACATCTTGAAGCTTTACGCTTGTTTGTCGAAACGAGGATCGAATTATCTCGTATTCGAGTATATGGTCAATGGCAATCTTTTTCAAGCCTTACGCAGAGGAATCAATGGAGAAACGCCTGAATTGGATTGGTATAAGAGGTATAGAATTGCATTAGGAGCTGCAAAAGGTATTGCTTATTTGCACCATGACTGCACTCCCCCAATTATTCATCGAGACATAAAATCGTCGAACATACTTCTAGACGAGGATTACGAGCCTAAGATTGCCGATTTCGGAGTGGCCAAGATCGTAGAAATGTTTCGAAAAGGTTCTGATTATAGTAACATGGCCGGTACTCACGGTTATATCGCTCCTGAACTTGCTTATACTTTCAAAGTCACGGAAAAGAGCGATGTCTATAGCTACGGCGTGGTGTTACTAGAACTAGTGACGGGCCGGAGTCCGATCGATGAAGAATATGGTGAAGCAAAAGACATTGTTTATTGGGTTGTATCTCATCTTAGCAACCATAAAAACGGCTCTAATGTTCTTGACGAGGTTGTGATGAACGAGGTTGTGAGGGACAACATGATTAAGGTTTTGAAGATTGCAATTCTTTGCACGATGAAGCTTCCGTCCGTTCGGCCTTCCATGAGAGAGGTAGTGAAGATGCTAATCGAAGCCGACCCTTGTTCTTCGAGGTCGCCCCACGGTGAATCGGAATAA 4986 40.87 MEFKNGLKYPMNFLSSWKDSESPCEFLGVSCDLISGKVTEIHLENMGLSGGISPAISALQKLTTFSLPTNNISGVIPSQLIKCSNLRVLNLTGNDMVGTIPDLSELRNLEVLDLSINHFNGGFPSWVGGLTSLVSLGLGENEFEESEIPESLGNLKNLTWLNLADLNLTGEIPESVYAMKELKTLDISRNKISGRISKSISKLENINKIELYSNNLTGEIPSEIGSLTLLQEIDISANKLYGKLPSEIVNLKNLVVFQLYENNFSGVIPAGFGDLRKLIGFSIYRNNFAGEFPSNFGRFSPLNYIDISENQFSGVFPKFLCENGSLQFLLALENNFSGDFPYSYAECKSLERFRINNNHFSGKIPDGLWGLPSAKIIDFSDNDFSGGISSEIELSTGLNQLLLQNNQFSGDLPSQLGKLTSLEKLQLSGNEFSGEIPSDLGSLKQLSSLYLEDNHLTGSIPSELGNCERLVDLNLARNSLTGKIPESVYAMKELKLSKSLGKIQNQYNHFSGKIPDGLWGLPSAKIIDFSDNDFSGGISSEIELSTGLNQLLLQNNQFSGDLPSQLGKLTSLEKLQLSGNEFSGEIPSDLGSLKQLSSLYLEDNHLTGSIPSELGNCERLVDLNLARNSLTGKIPESFSSMSSLNSLNLSMNKLSGSIPEDLEKMKLRSIDFSENQLSGKAPFYLLAVSGDKAFLGNIALCLRFFHFLAALFFVCCILSVSESVNVETNALMEFKHGLKYPMNFLSSWKDSESPCEFLGVSCDLISGKVTEIHLENMGLSGGISPAISALQKLTTFSLPTNNISGVIPSQLIKCSNLRVLNLTGNDMVGTIPDLSELRNLEVLDLSINHFNGGFPSWVGGMTSLVSLCLGENEFEESEIPESLGNLKNLTWLNLADLNLTGEIPESVYAMKELTTLDISKNKISGRISKSISKLENINKIELFSNNLTGEIPSEIGSLTLLQEIDISANKLYGKLPGEIVNLKNLVVFQLYENNFSGEIPAGFGDLRKLIGFSIYRNNFAGEFPPNFGRFSPLKSIDISENQFSGVFPKFLCENGSLQFLLALENNFSGDFPYSYAECKSLERFRINNNHFSGKIPDGLWGLPSAKIIDFSENDFSGGISSEIELSTGLNQMLLQNNQFSGDLPPQLGKLTSLEKLQLSGNEFSGEIPSDLGSLKQLSSLYLDDNHLTGSIPSELGNCERLVDLNLARNSLTGKIPESFSSMSSLNSLNLSMNKLSGSIPEDLKKMKLSSIDFSENQLSGKAPFDLLAVSGDKAFLRNIALCVDKNDLLRLNSSLEICSENHSKENILKNNLFFFCIIASALLFVIPGFLLVYSKLHDHDLEADLDGEKETDSKWKLSSFHPVEFDCDEICNLEEANLIGSGGSGRVYRVDLRKNRGMVAVKQLWKGDSRKVFDAEMAALGTIRHRNILKLYACLSKRGSNYLVFEYMVNGNLFQALRRGINGETPELDWYKRYRIALGAAKGIAYLHHDCTPPIIHRDIKSSNILLDEDYEPKIADFGVAKIVEMFRKGSDYSNMAGTHGYIAPELAYTFKVTEKSDVYSYGVVLLELVTGRSPIDEEYGEAKDIVYWVVSHLSNHKNGSNVLDEVVMNEVVRDNMIKVLKIAILCTMKLPSVRPSMREVVKMLIEADPCSSRSPHGESE 1661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1885280 1896392 - Bma014654.1 Bma02g00197 77447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00197 1661 SMART serkin_6 1373 1652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00197 1661 Gene3D Phosphorylase Kinase; domain 1 1348 1447 - -
Bma02g00197 1661 Pfam Leucine rich repeat 181 240 IPR001611 GO:0005515
Bma02g00197 1661 Pfam Leucine rich repeat 619 677 IPR001611 GO:0005515
Bma02g00197 1661 Pfam Leucine rich repeat 1200 1258 IPR001611 GO:0005515
Bma02g00197 1661 SUPERFAMILY Protein kinase-like (PK-like) 1368 1645 IPR011009 -
Bma02g00197 1661 SUPERFAMILY L domain-like 163 461 - -
Bma02g00197 1661 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 497 702 - -
Bma02g00197 1661 Gene3D Transferase(Phosphotransferase) domain 1 1448 1655 - -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 723 877 IPR032675 -
Bma02g00197 1661 SMART LRR_typ_2 251 274 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 1222 1245 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 569 592 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 130 155 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 443 467 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 1150 1173 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 419 442 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 1174 1198 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 179 203 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 641 665 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 861 886 IPR003591 -
Bma02g00197 1661 SMART LRR_typ_2 593 617 IPR003591 -
Bma02g00197 1661 SMART LRR_sd22_2 958 984 - -
Bma02g00197 1661 SMART LRR_sd22_2 227 253 - -
Bma02g00197 1661 SMART LRR_sd22_2 179 208 - -
Bma02g00197 1661 SMART LRR_sd22_2 910 939 - -
Bma02g00197 1661 PANTHER UNNAMED PRODUCT 497 702 - -
Bma02g00197 1661 PANTHER UNNAMED PRODUCT 1 494 - -
Bma02g00197 1661 PANTHER UNNAMED PRODUCT 706 1657 - -
Bma02g00197 1661 SUPERFAMILY RNI-like 941 1291 - -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 1006 1294 IPR032675 -
Bma02g00197 1661 ProSitePatterns Protein kinases ATP-binding region signature. 1379 1402 IPR017441 GO:0005524
Bma02g00197 1661 SUPERFAMILY L domain-like 19 203 - -
Bma02g00197 1661 SUPERFAMILY L domain-like 755 1017 - -
Bma02g00197 1661 SUPERFAMILY L domain-like 377 686 - -
Bma02g00197 1661 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 1 494 - -
Bma02g00197 1661 PANTHER RECEPTOR-LIKE PROTEIN KINASE HSL1 706 1657 - -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 878 934 IPR032675 -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 935 1005 IPR032675 -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 1 103 IPR032675 -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 201 274 IPR032675 -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 104 199 IPR032675 -
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 586 704 IPR032675 -
Bma02g00197 1661 Pfam Leucine rich repeat N-terminal domain 1 32 IPR013210 -
Bma02g00197 1661 Pfam Leucine rich repeat N-terminal domain 727 763 IPR013210 -
Bma02g00197 1661 ProSiteProfiles Protein kinase domain profile. 1373 1652 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00197 1661 Gene3D Ribonuclease Inhibitor 275 585 IPR032675 -
Bma02g00197 1661 ProSiteProfiles Leucine-rich repeat profile. 816 838 IPR001611 GO:0005515
Bma02g00197 1661 Pfam Protein kinase domain 1375 1643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00197 1661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1495 1507 IPR008271 GO:0004672|GO:0006468
Bma02g00197 1661 ProSiteProfiles Leucine-rich repeat profile. 85 107 IPR001611 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02569 Bma-Chr1:83310675 Bma02g00197 Bma-Chr2:1885280 1.86E-66 dispersed
Bma02g00197 Bma-Chr2:1885280 Bma04g01005 Bma-Chr4:16659051 5.79E-139 dispersed
Bma04g00422 Bma-Chr4:3406792 Bma02g00197 Bma-Chr2:1885280 5.94E-12 dispersed
Bma02g00197 Bma-Chr2:1885280 Bma15g01096 Bma-Chr15:43629790 2.07E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66330 PF00069 Pkinase 1.70E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00197 - - qsu:111985096 1234.17