Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00207 ATGGACGAATTTGGTGTCTTAACCGAAAGATTTGGGTTGAAATCGCAGGGAAGAGGGGCTCCGATGGCAGCGTCGAAGCTACCTACCAATGTCAACTCTGCCCAAACTCGGAATTACGGGGGTTTATTTGGAGGGATCGACGAGCCAAAGAAATATGTCGGCAACTCTAAAAGCGACGGGTCTTCGTTTGATTTGGATTCAATCTTTACGAGATCGAGTAATTCTGGTTCAAATTCCACCTCATTTCTTGGACTCGATGATGATGTATTTGGTAAAATGACTGGATCTACGAGCTCGGTTTCGGCGAAAATGGATGATTTGTTTGTATCTTTTTCTTCACCATCTAATCAAGGTGCTCCCATCAATGACTTTCTTGATGATCTCCATAAGAACGAGACACGCTTCCAAAATCCAAAAAGAAACGAATTTAAAAGTGCAGCAAAAAATACTTTGGACTTTGATGAATTGATTCCGGGGTTTGGTGGAAGCAACGCTACAAGTGGGGTTGGCTCGGACAGAAAACTAAAATCATCTACTCTTGCAAGTAAATCCGGGTTTGTCTCAGCTGAAGATCCCTTTGTAATATTAGAGTCCACATCAACCTCTACTCATGCTTCCTCCGAGGTGTTCTCCGATCCTCTGGAACAAATCAACAACTACGCCGGCACAAAACCTGGTGTTTCGTCCAGTTCCTCATCATTCAGGGTTCCTCCCATACCAAAGCCATCGGCCGCGGCAGATAAAGGTTCGAATTTCTCTATTATAGACGAGCTCGAGCACTTTGCAATGGGGAGGATGAAAAATAATAGTCATGAAGAGAAGGGAAAGACTTCAACATCCAATACTAGTAAATATAGTGGAGCTACAGATCCTTTTGGGGATAGTAAGCAGAACCTAGTCTATGATCTGGATTTCCTTTTCGATGCGGGTTCTCGATCGAGGAGTGTACCTAAGTCAAGGGCGACAAATCTGGACCCTTTATTTGACATGCATGTGAACAGCAGAGGGCCTGAAGTGGCCAAAAGGACAAGTTCTGTCATCTCAACCAGCATAAAAAAGTCTTCTTCTGCAACAGATATTGGGGATGACTTTTCTTTTATTTTTGGAGCTTCTCCAGTTTTTGGGGACCTGCAGGAAGTTGATGGAGAGCCTGAAGATAGAAGGAAAGCAAGATTAGGACGTCATCAAAGGACCTTAGCAAGAGCGGCAAAAGCCGTTGAAGACATGAACCGCCGAGACTTTGAAAATCTGCTGGAGCAAGAAGAAAGACGAAGGGTTGCAGAGTCTCTAGATGTTCAAATAAAGCGCTGGGCTGCAGGCAAGGAAGGAAATATGCGAGCACTGTTGTCCACACTGCATCAAGTTCTTTGGCGAGAATGTGATTGGCAGCCAGTTTCACTAACGGATATGATAACATCTGCGTCGGTCAAAAAAGTATATAGGAAGGCGACGTTGTGTATCCATCCCGATAAGGTTCAGCAGAAGGGTGCTAGTATTGAACACAAGTATACAGCAGAGAAGGTTTTTGATGTTCTTAAGGAAGCTTGGAATAAGTTCAGCAAGGAGGAACTCTCATAG 1578 44.11 MDEFGVLTERFGLKSQGRGAPMAASKLPTNVNSAQTRNYGGLFGGIDEPKKYVGNSKSDGSSFDLDSIFTRSSNSGSNSTSFLGLDDDVFGKMTGSTSSVSAKMDDLFVSFSSPSNQGAPINDFLDDLHKNETRFQNPKRNEFKSAAKNTLDFDELIPGFGGSNATSGVGSDRKLKSSTLASKSGFVSAEDPFVILESTSTSTHASSEVFSDPLEQINNYAGTKPGVSSSSSSFRVPPIPKPSAAADKGSNFSIIDELEHFAMGRMKNNSHEEKGKTSTSNTSKYSGATDPFGDSKQNLVYDLDFLFDAGSRSRSVPKSRATNLDPLFDMHVNSRGPEVAKRTSSVISTSIKKSSSATDIGDDFSFIFGASPVFGDLQEVDGEPEDRRKARLGRHQRTLARAAKAVEDMNRRDFENLLEQEERRRVAESLDVQIKRWAAGKEGNMRALLSTLHQVLWRECDWQPVSLTDMITSASVKKVYRKATLCIHPDKVQQKGASIEHKYTAEKVFDVLKEAWNKFSKEELS 525
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2243404 2247643 + Bma014664.1 Bma02g00207 77457

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00207 525 MobiDBLite consensus disorder prediction 221 237 - -
Bma02g00207 525 MobiDBLite consensus disorder prediction 221 248 - -
Bma02g00207 525 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 299 524 - -
Bma02g00207 525 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 1 233 - -
Bma02g00207 525 Gene3D DnaJ domain 398 524 IPR036869 -
Bma02g00207 525 MobiDBLite consensus disorder prediction 267 291 - -
Bma02g00207 525 Coils Coil 392 412 - -
Bma02g00207 525 ProSiteProfiles dnaJ domain profile. 460 524 IPR001623 -
Bma02g00207 525 SUPERFAMILY Chaperone J-domain 380 523 IPR036869 -
Bma02g00207 525 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 299 524 - -
Bma02g00207 525 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 1 233 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00207 - - - mcha:111011847 521.161
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00207 Bma-Chr2:2243404 Bma15g00765 Bma-Chr15:15836979 3.68E-17 dispersed
Bma02g00207 Bma-Chr2:2243404 Bma09g00448 Bma-Chr9:38393111 4.23E-16 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g224 Blo01g01553 . . . . Bpe04g00208 . . Cmo04g02503 Cmo15g00664 . . . . Sed01g3080 . . Bhi04g01874 Tan11g1245 Cmetu03g1597 . Hepe02g2217 . Lcy10g1250 Cla08g00620 Cam08g1034 Cec08g0623 Cco08g0735 Clacu08g0744 . Cre08g0552 . . Cone17ag0822 . . . . Cme03g00497 . . . Bda13g01471 . Bpe14g00394 . Bma02g00207 . . . . . Car04g02309 Car15g00604 Cpe01g02071 . . . . . . . . . . . . . . . Lsi08g00460 . Chy03g00758 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006624 1 1 1 1 1 1 3 1 1 1 1 1 2 1 1 2 1 1 2 1 1 1 1 1 2 1 1 1 2 2 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma02g00207 Bma_Chr02 FPKM 55.017616 61.755634 49.42543 46.9272 18.55555 20.743382 16.64982 72.279648 77.091316 77.359795