Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00209 ATGTCGACCCAGAATCGTCGATCGTCCTTTTCCTCCTCCACCTCGTCGTCGCTAGCGAAGAGGCATGCCTCGTCGGAAAATATGGGGAAGCTTACGGCTCTTCCCCCTCATCACGCAAAGAAGCGGGCGCCTCTCGCTAACCTCACTAATTTGAAGGCTGCATCGCGAAGCTCTGTCCCATCTTCTACTATGGTACCCTGCGTTACAAAAATTTCCAAGGCTAAGAAACGTTCCCCTGGAAGAAATGGTATCGCAGGCCTACCAGGGAATGCTATGGTCAATGTGAAATCAACTTTAGTGGCTCCTCTTAAATCTACAACTTTACTGAAAAGTGAAGCAATCGTTCCTCCCTCTGCTGTCATTCTTCCTCCGAGCAGCATGGATGTGTCTCCAAGTAAATCAGATGGAATTTCTGTCTCTTTAGATGAGACAATGTCTTCTTCTGATTCGTTTAAGAGTCCTGAAGTTGAGTATGTAGACAACAATGATGTATCGATGGTTGATTCAATCGAGAGGAAAACATTTAGCATTCTCCACATTTCAGACCACAATGTAGAAACCAAAGGTCCGAATATTTGCAGCAGAGATATGCTTGTTGACCTTGAAAGAGATGAAAAATTCGTGGATGTTGATAATGATTACGAGGATCCCCAGAAGTGTGCTACCATTGCTTGTGATATTTACATGCATTTGCGTGCATCTGAGGCAAAGAAAAGGCCTTCCACAGATTTCATGGAGAGAATTCAGAAAGATATAAATGCGAACATGCGAGCAATTTTAGTCGATTGGCTTGTGGAGGTAGCAGAAGAATACAGGCTAGTCCCTGATACACTCTATCTGACTGTAAATTATATCGATCGCTATCTCTCTGGGAATGCTATGGACAGACAAAGATTACAGTTGCTTGGCGTTGCTTCAATGATGATCGCATCGAAGTACGAGGAGATTTGTGCGCCACAGGTGGAAGAGTTTTGTTACATTACAGATAATACGTACTTTAAAGAAGAGGTTTTGCAAATGGAGTCTTCTGTTTTGAATTACTTGAAGCGATTTGTTCGAGCTGCTCAAGGTATTGATGAGATTCCAAAAATGCAAATGGAATGCTTGGCTAACTACCTTGCCGAGCTGTCTCTGATCGAGTACAGCATGCTCGTTTATTCTCCATCGCTCGTTGCGGCTTCTGCCATTTTCTTGGCAAAGTTCATACTTTTCTCGAATAAGAGACCATGGGACTCCACTTTGCAGCATTACACTCTTTACCAGCCTTGTGATCTAAGAGATTGTGTGAAGGACTTGCATAAATTGTGTTGTAATTCTCCTACTTCTACGCTTCCAGCTATTAGGGAGAAATACAGCCAACACAAGTACAAACAAGTGGCAAAAAAGCATTGCCCTCCAATTGTACCTCCTGAGTTTTTTTACAATCAAACCCACTAA 1437 43.01 MSTQNRRSSFSSSTSSSLAKRHASSENMGKLTALPPHHAKKRAPLANLTNLKAASRSSVPSSTMVPCVTKISKAKKRSPGRNGIAGLPGNAMVNVKSTLVAPLKSTTLLKSEAIVPPSAVILPPSSMDVSPSKSDGISVSLDETMSSSDSFKSPEVEYVDNNDVSMVDSIERKTFSILHISDHNVETKGPNICSRDMLVDLERDEKFVDVDNDYEDPQKCATIACDIYMHLRASEAKKRPSTDFMERIQKDINANMRAILVDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNAMDRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKEEVLQMESSVLNYLKRFVRAAQGIDEIPKMQMECLANYLAELSLIEYSMLVYSPSLVAASAIFLAKFILFSNKRPWDSTLQHYTLYQPCDLRDCVKDLHKLCCNSPTSTLPAIREKYSQHKYKQVAKKHCPPIVPPEFFYNQTH 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2255994 2259084 - Bma014666.1 Bma02g00209 77459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00209 478 Pfam Cyclin, N-terminal domain 226 349 IPR006671 -
Bma02g00209 478 SUPERFAMILY Cyclin-like 215 349 IPR036915 -
Bma02g00209 478 CDD CYCLIN 256 345 IPR013763 -
Bma02g00209 478 SMART Cyclin_C_2 342 465 IPR004367 -
Bma02g00209 478 SMART cyclin_7 350 434 IPR013763 -
Bma02g00209 478 SMART cyclin_7 262 346 IPR013763 -
Bma02g00209 478 PIRSF Cyclin_A_B_D_E 1 470 IPR039361 -
Bma02g00209 478 MobiDBLite consensus disorder prediction 1 43 - -
Bma02g00209 478 PANTHER CYCLINS 30 475 IPR039361 -
Bma02g00209 478 MobiDBLite consensus disorder prediction 1 23 - -
Bma02g00209 478 CDD CYCLIN 345 433 IPR013763 -
Bma02g00209 478 ProSitePatterns Cyclins signature. 257 288 IPR006671 -
Bma02g00209 478 PANTHER CYCLIN-A1-1 30 475 - -
Bma02g00209 478 Gene3D - 240 349 - -
Bma02g00209 478 SUPERFAMILY Cyclin-like 344 466 IPR036915 -
Bma02g00209 478 Gene3D - 226 461 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02702 Bma02g00209 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02152 Bma-Chr1:78043311 Bma02g00209 Bma-Chr2:2255994 2.64E-92 dispersed
Bma01g02257 Bma-Chr1:79747472 Bma02g00209 Bma-Chr2:2255994 4.50E-56 dispersed
Bma02g00209 Bma-Chr2:2255994 Bma04g00147 Bma-Chr4:1283818 1.92E-82 dispersed
Bma07g00293 Bma-Chr7:3670622 Bma02g00209 Bma-Chr2:2255994 4.11E-49 dispersed
Bma02g00209 Bma-Chr2:2255994 Bma02g00210 Bma-Chr2:2260698 8.59E-106 tandem
Bma01g00805 Bma-Chr1:7537800 Bma02g00209 Bma-Chr2:2255994 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00209 K06627 - mnt:21396560 653.284