Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00210 ATGGACTCACAACTCTGTCCATTCGTTGCCTGGGATATCTATGATTACCTGCATGCATCCGAGATGCACAATAGGCCCAGCACGTATTACTTGGAAACTATCCAGAAAGACATTAATGCTAGCATGAGATCAATTATCATTGGTTGGCTTGTGGAGGTCGCTGAGGAGTATAATCTTGTACCTGATACATTGTTCTTAGCCGTCAACTATATAGATCGTTATCTCTCTGGAAATTCAGTGAAAAGGAGGCACTTGCAGTTACTTGGAGTTGCATGCATGTTGGTTGCTGCAAAGTATGAAGAGATTTCTCCTCCAAGTGTGGAAGAGTTCTGCTACATAACTGATTATACATATTTTAGAGAACAGGTCTTACGGATGGAATTTAGTGTTTTGAGTTACTTGAAGTTTGAATTGTCAGTACCCACAACAATATGTTTTCTGCGGAAATTTATTTTTGTGGCCCAAAAGACCTGCGAGGTTCCACTGATCCAGTTTACGTGTCTGGCGAATTTCCTGGCAGAGTTATCTCTTCTAGAATATAATATGCTTTCATATGCTCCTTCACTGATAGCTGCTTCAGCTACTTTCTTAGCCAAATTTATTCTTATCCCCTCCAAGGGACCTTGGAATTGTACTTTGAGGCATCATACGTCTTATAAAGCGTCTGATTTGCGAGAATGTGTCATGGCGATACATTCCCTGTGTTGTACTGGCGATAACTCTAGTTCACTTCATGCAGTTAGGAAGAAGTACAGCCAACATGAGGTAAAAAAGTACCTGATTGGCAGTTTGCGTGTATTTTTGTTGTTGTTGCCTGAAGTAATTTTTTTTTTCCTCAAAGATGGCCTGCTACTCTTCTAG 861 40.53 MDSQLCPFVAWDIYDYLHASEMHNRPSTYYLETIQKDINASMRSIIIGWLVEVAEEYNLVPDTLFLAVNYIDRYLSGNSVKRRHLQLLGVACMLVAAKYEEISPPSVEEFCYITDYTYFREQVLRMEFSVLSYLKFELSVPTTICFLRKFIFVAQKTCEVPLIQFTCLANFLAELSLLEYNMLSYAPSLIAASATFLAKFILIPSKGPWNCTLRHHTSYKASDLRECVMAIHSLCCTGDNSSSLHAVRKKYSQHEVKKYLIGSLRVFLLLLPEVIFFFLKDGLLLF 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2260698 2263482 - Bma014667.1 Bma02g00210 77460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00210 286 Gene3D - 12 258 - -
Bma02g00210 286 CDD CYCLIN 42 131 IPR013763 -
Bma02g00210 286 Gene3D - 26 139 - -
Bma02g00210 286 PIRSF Cyclin_A_B_D_E 1 263 IPR039361 -
Bma02g00210 286 Pfam Cyclin, C-terminal domain 141 258 IPR004367 -
Bma02g00210 286 Pfam Cyclin, N-terminal domain 12 139 IPR006671 -
Bma02g00210 286 PANTHER CYCLINS 2 257 IPR039361 -
Bma02g00210 286 SUPERFAMILY Cyclin-like 140 257 IPR036915 -
Bma02g00210 286 CDD CYCLIN 139 232 IPR013763 -
Bma02g00210 286 PANTHER CYCLIN-A1-1 2 257 - -
Bma02g00210 286 ProSitePatterns Cyclins signature. 43 74 IPR006671 -
Bma02g00210 286 SMART cyclin_7 48 132 IPR013763 -
Bma02g00210 286 SMART cyclin_7 149 233 IPR013763 -
Bma02g00210 286 SMART Cyclin_C_2 141 268 IPR004367 -
Bma02g00210 286 SUPERFAMILY Cyclin-like 4 138 IPR036915 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00805 Bma02g00210 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00805 Bma-Chr1:7537800 Bma02g00210 Bma-Chr2:2260698 3.63E-108 dispersed
Bma02g00210 Bma-Chr2:2260698 Bma04g00147 Bma-Chr4:1283818 1.22E-78 dispersed
Bma02g00209 Bma-Chr2:2255994 Bma02g00210 Bma-Chr2:2260698 8.59E-106 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00210 K06627 - csin:114262463 357.066