Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00214 ATGAGTATTGAAAGCAGTCCTTGTGGGGGGCATCATGGCGAAGAAGATGTATCCTTCTCTCAGTTGCACTTAATTGATCTAGCGGGATCTGAAAGTTCTAAAACAGAAACAACTGGATTGAGGAGAAAGGAAGGTTCATATATCAATAAAAGCTTACTGACTCTGGGCACGGTGATTTCTAAACTAACAGATGAAAAAGCTACACACGTCCCCTATCGAGACTCAAAACTTACTCGCCTGTTGCAGTCATCCCTTAGTGGCCATGGAAGGGTTTCTCTCATTTGCACTGTGACTCCTGCCTCTAGCAACAGTGAGGAGACACACAACACGTTGAAGTTTGCACATCGCAGCAAACGCGTAGAAATTAAGGCCTCTCAAAATAAGATTATTGATGAGAAATCTCTCATTAAAAAATATCAGAAGGAAATTTCCAGTTTGAAGAAGGAGCTTCAGCAACTAAAGCAGGGGATGATGGAAAGTCCTCATGTTATTGCTTCTACTCAAGAAGATCTAGTTAATCTAAAGCTTCAGCTGGAAGCAGATCAAATGAAATTGCAAACAAGACTGGAAGAGGAGGAACAAGCCAAAGCGGCATTAATGGGAAGAATACAAAGATTGACTAAACTAATTTTAGTATCCACAAAAAATACGTTGCCATCAAATGTTCCAGAAAGGCCAGTTCCTAGGCGAAGACATTCCTTTGGGGAAGATGAGCTAGCATATCTACCTGATAAAAAACGTGACTACATGAATGATGATGATGCTGGAAGCTTTGCTTCAGAACTTTCATTGGAAGGAAGGGATGATGCTGCAAATTTGGATGAATTGGCTTGGGATAGTAAAAGAAACAAAAGACGTGGAATGCTTGGTTGGTTTAAACTGCGAAAACCTGAAAATCTGTTAGGATTGCCATCAACTCCTGGTAGTGATAGCTCTGGTTGTGAGTCACCAGCATGTGGCATGAAATCTTCACAAAATAGATTGATTCTGAATGAAATTAAGAATGAAAATAGAAAATCAGTCAGCACAGGAGGAGATGATACTTCTTTTATTAGTTCATATCAAGAACAAACGCAAGCTGGTGACTTATTTTGTGCAACTATTGGAAACCGCCGCATGCCTTCGACTGGGACCACTATTACTGATCAGATGGATCTTCTTCGTGAACAACTCAAAATGTTGGCTGGGGAGATTGCCTTGTCCACCAGTTCTCTAAAAAGATTGTCCAAACAAGCAGCTAGAAACCCTGACGATTCACAAATTAAGGAATGCATGCAAAAGTTGAAGGATGAAATTAGTGAAAAGAAGCATCAAATGCACGTTCTGGAGAAACGCATGATTAAATCAGTTGAGATGTCTCCACACATCCCAAATGGAGGTGAACTGTTCCAGGCTTTATCAAAACTAACCATTCAACTTAATGAAAAGACTTTCGAGCTTGAGATTAAAGCAGCAGACAATAGGATACTTCAAGAGCAACTGCAGATAAAGATAGCAGAAAATGTTGAGATGCAAGATACTATTCTTCTTCAGAGGCAACAACTCAATTCATTGTCAGATAAATGTTCTAGTAATTCACAAAGAACAGCTGACATTGATGCTTTCCAGCTGAAGATTTGTTCTGAAAAATCATTAGATTTGGAGAAAGAAGAGGGGAATCAAGTTGGTTTTTCTGATGTTGATATAACCACTCCAACTAGCGTCATGAGCTTCAATAGAGTAATTCTGCAAGAAGACTCAAAAGAGAGAAAGAACGAAAACGTATTGCATTCCCAAGTTCTGATGCAGGCTGCCGAGATAGAGAATTTGAGGCAAGAGAAGGTGCGGCTGATTGAAGAAAGGGATGGGCTTGAGGTTCAGAGTGTTAAGCTTGCTGAGGAAGCTTCATATGCAAAAGAGTTGGCTGCAGCTGCAGCAGTTGAACTTCGAAATTTGGCTAAAGAAGTAACCAAACTTTCTTATGCAAATGCGAAACTTACTGGTGACCTGGCAGCTACTCATGGTGTTCATGGCAAATTGAGCAGTCAAAGGTCTACTCTATCAGATATGAAGAGAGGTATTAATAACGGTCCTAGATCAGATAGAACCCCAGAAAATGGAGTATTTGTTGAGGAGCTGCAGAGAGAACTTAATGTCAGGTACCAAAGAGAAGCTGCCTTTGAAAAGGCATTGTCTGAGAGAGAGCAAATAGAATCTGAACTACGAAGAAAACTTAATGAAGCAAAACAACATGAAGAAGATTTGGAAAATGAACTGGCAAATATGTGGGCCATGGTTGCAAAAATGAGAAAATCTGGTGTCAACACAGAGGATATACAAGCCGTAGGAGTTCAAAGAGGAGTTGGAGAAAGACATTTACCATCAAATGGACTATCAGATAAGATTAAAAACGGAGACGAAGAACAAGAAAGCCTGCTTAAGATAAGAAAGTTAGAAGATTTGAAAGCATGCTACGAGAAAGAAAAGATGCGATGTAAAGAATTAGAAAGCATTGTTTCCAGACTGAAGGGAGAAGAAATTTCTGATTTGAATGTTGCGGCTCTTGAAGACCTCCAGAACCTTCATGTCGAGGCTCTAACAAAAATTTGCCAGGCAAAGTGTGCCGATCAGCTTTTGTAG 2619 40.02 MSIESSPCGGHHGEEDVSFSQLHLIDLAGSESSKTETTGLRRKEGSYINKSLLTLGTVISKLTDEKATHVPYRDSKLTRLLQSSLSGHGRVSLICTVTPASSNSEETHNTLKFAHRSKRVEIKASQNKIIDEKSLIKKYQKEISSLKKELQQLKQGMMESPHVIASTQEDLVNLKLQLEADQMKLQTRLEEEEQAKAALMGRIQRLTKLILVSTKNTLPSNVPERPVPRRRHSFGEDELAYLPDKKRDYMNDDDAGSFASELSLEGRDDAANLDELAWDSKRNKRRGMLGWFKLRKPENLLGLPSTPGSDSSGCESPACGMKSSQNRLILNEIKNENRKSVSTGGDDTSFISSYQEQTQAGDLFCATIGNRRMPSTGTTITDQMDLLREQLKMLAGEIALSTSSLKRLSKQAARNPDDSQIKECMQKLKDEISEKKHQMHVLEKRMIKSVEMSPHIPNGGELFQALSKLTIQLNEKTFELEIKAADNRILQEQLQIKIAENVEMQDTILLQRQQLNSLSDKCSSNSQRTADIDAFQLKICSEKSLDLEKEEGNQVGFSDVDITTPTSVMSFNRVILQEDSKERKNENVLHSQVLMQAAEIENLRQEKVRLIEERDGLEVQSVKLAEEASYAKELAAAAAVELRNLAKEVTKLSYANAKLTGDLAATHGVHGKLSSQRSTLSDMKRGINNGPRSDRTPENGVFVEELQRELNVRYQREAAFEKALSEREQIESELRRKLNEAKQHEEDLENELANMWAMVAKMRKSGVNTEDIQAVGVQRGVGERHLPSNGLSDKIKNGDEEQESLLKIRKLEDLKACYEKEKMRCKELESIVSRLKGEEISDLNVAALEDLQNLHVEALTKICQAKCADQLL 872
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2290786 2304256 + Bma014671.1 Bma02g00214 77464

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00214 872 ProSitePatterns Kinesin motor domain signature. 20 31 IPR019821 GO:0003777|GO:0005524|GO:0007018
Bma02g00214 872 SMART kinesin_4 1 128 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00214 872 Coils Coil 808 838 - -
Bma02g00214 872 PANTHER CENTROMERE PROTEIN E 2 857 - -
Bma02g00214 872 Pfam Kinesin motor domain 14 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00214 872 Coils Coil 425 445 - -
Bma02g00214 872 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 155 IPR027417 -
Bma02g00214 872 Coils Coil 122 156 - -
Bma02g00214 872 Coils Coil 164 209 - -
Bma02g00214 872 ProSiteProfiles Kinesin motor domain profile. 1 120 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00214 872 Coils Coil 593 620 - -
Bma02g00214 872 PRINTS Kinesin heavy chain signature 70 91 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00214 872 PRINTS Kinesin heavy chain signature 21 39 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Bma02g00214 872 PANTHER KINESIN-LIKE PROTEIN KIN-7C, MITOCHONDRIAL 2 857 - -
Bma02g00214 872 Coils Coil 720 754 - -
Bma02g00214 872 MobiDBLite consensus disorder prediction 673 698 - -
Bma02g00214 872 Gene3D Kinesin motor domain 2 152 IPR036961 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00214 K11498 CENPE; centromeric protein E - qsu:112035724 1110.9
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00214 Bma-Chr2:2290786 Bma05g01326 Bma-Chr5:52829194 5.29E-115 dispersed
Bma02g00214 Bma-Chr2:2290786 Bma03g00568 Bma-Chr3:4717951 9.46E-109 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g245 . Blo12g00619 . . . Bpe04g00538 . . . Cmo15g00677 . . . . . . . Bhi04g01895 . . . . . Lcy10g1236 Cla08g00606 Cam08g1019 Cec08g0609 Cco08g0720 Clacu08g0730 . Cre08g0538 . . . Cone20ag0437 . . . Cme03g00530 Blo17g00172 . . . . Bpe14g00387 . Bma02g00214 . . . . . . Car15g00615 . . . . . . . . . . . . . . . . Lsi08g00445 . Chy03g00784 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010749 0 3 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 32
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma02g00214 Bma_Chr02 FPKM 7.625372 6.059886 4.597601 5.446218 1.135998 1.526672 1.558782 11.529092 11.689096 12.7904