Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00231 ATGGAGAAACCTTGGGGTGGTTTCCTATGTCTTTTCAGCACCAAATCTCTCCATATTACTGCTCGACGAGGACAGCTACGTAAGGAGAAGGAAGAAGTTTCTGTGAAGAAGCGTAAGAAAATGAGATATTGTTCTGGTTCGCTTTGTGGTGGCACGAAGGTGATGCAAAGGGCTTTTACAAGAAAAGGGTCGCCGGAGTTTTACAAGAAAAGGGCTTTTAGGGTTTCATCAAGCAACTCCATTGCTGATTCTATCTCTACCAGGTCCATGACATCTCCTCTTTACAAACGCAACGGCAGTGGTCGGTCTCCTCTTTCCACGTCTTTTTCTTTTTCTTCTTCTGCTTCTTCTTCTGCAACTTATAGTGCCGCCATTAATGGCGGCAGTGGTTCTCTCGGAGCAATTCCTTCCAGAAAATTCTCCGGGTGTTATGAGTCTAAGACGGTGATGGATCCCATTCTTGGATACACGAAAGATCTTTCCTTTAGATCAAGCATTTTTCCTTGTCCGATGTGTGGTGAGATTTTCATGATGTCTGAAAATTTGGAGCTTCATCAGGCTACTAGTCATGCTGTGTCTGAACTAGATCCAGAGGACACAAGCAGAAAGATTGTGGAAATCATATTCAAATCCAGTTGGATGAAGAAGGAGCCTCCAACCTGCAAGATAGAGCGAATCCTCAAAGTCCACAACACACAAAAAACCATTTCAAAATTCGAAGAACACAGAGACGCCGTTAAAGCGAAAGCAACAAAGCTCCAGAAGAAACACCCCCGCTGCCTAGCCGACGGAAACGAGCTGCTCCGATTCCACTGCACCACCATCGCTTGCTCTCTGGGCGTCAACGGCAGTACCGAACTCTGCCACGCGATTCATCCTCCATGCAGTACCTGCAGCATCATAAGGGGCGGCTTCAAGGCGGCGGAAAAGGGTATTCTGACGACGGCCACAAGTGGAGCGGCGGATGATAGAGCAGGGGAGGCGGTGGAGGGGAACGAGAAGAGGGCGATGATGGTCTGTCGGGTGGTGGCCGGGAGGGTGAAGAGGAGCGTGGAAGCGGGGATGGAGTATGACTCAGTAAGTGGAGGGGTTGGAGTTTATTCTAGTTTGGACGAGTTGTATGTTTTCAATCCCAAGGCTATATTGCCTTGCTTTGTTGTTATTTATGAAGGGCTTAATGCTTAA 1185 47.85 MEKPWGGFLCLFSTKSLHITARRGQLRKEKEEVSVKKRKKMRYCSGSLCGGTKVMQRAFTRKGSPEFYKKRAFRVSSSNSIADSISTRSMTSPLYKRNGSGRSPLSTSFSFSSSASSSATYSAAINGGSGSLGAIPSRKFSGCYESKTVMDPILGYTKDLSFRSSIFPCPMCGEIFMMSENLELHQATSHAVSELDPEDTSRKIVEIIFKSSWMKKEPPTCKIERILKVHNTQKTISKFEEHRDAVKAKATKLQKKHPRCLADGNELLRFHCTTIACSLGVNGSTELCHAIHPPCSTCSIIRGGFKAAEKGILTTATSGAADDRAGEAVEGNEKRAMMVCRVVAGRVKRSVEAGMEYDSVSGGVGVYSSLDELYVFNPKAILPCFVVIYEGLNA 394
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2421948 2423334 - Bma014687.1 Bma02g00231 77481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00231 394 Coils Coil 236 256 - -
Bma02g00231 394 SUPERFAMILY ADP-ribosylation 192 391 - -
Bma02g00231 394 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 390 - -
Bma02g00231 394 ProSitePatterns Zinc finger C2H2 type domain signature. 169 190 IPR013087 -
Bma02g00231 394 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 195 IPR013087 -
Bma02g00231 394 Gene3D - 190 390 - -
Bma02g00231 394 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 32 390 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02640 Bma02g00231 CCT
Bma01g00833 Bma02g00231 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00833 Bma-Chr1:7839060 Bma02g00231 Bma-Chr2:2421948 1.32E-175 dispersed
Bma01g00835 Bma-Chr1:7883422 Bma02g00231 Bma-Chr2:2421948 9.53E-174 dispersed
Bma01g02640 Bma-Chr1:83911540 Bma02g00231 Bma-Chr2:2421948 9.89E-135 dispersed
Bma02g00231 Bma-Chr2:2421948 Bma04g00246 Bma-Chr4:2103621 8.99E-93 dispersed
Bma14g00361 Bma-Chr14:4387186 Bma02g00231 Bma-Chr2:2421948 2.42E-67 dispersed
Bma02g00228 Bma-Chr2:2396807 Bma02g00231 Bma-Chr2:2421948 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56855 None None None None Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00231 - - qlo:115960248 432.565