Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00241 ATGGATTGGAAGAATAGGAGGAGCAGTCCGAGGTTGGAGCGCTGTAATGCCGCCAAACGCATTGAGTACGATGCGCTGGCTGCATCTTCGTCGCTGGATGGTTCGTATGGATCGATGCATACCCGCTGGCTGAAGTTTCCGGACCGAACGAGCTTCAGAATTGAGGGGATTGATGGCGAAGTTGATCGGATATGTCTGAGTTTGGGGCTTTCCGGGCCTGACGACTTTGCGATTCCGGAGGCGGCGTATGAATCTAAGAAGGTCCGCTCGTCTTCTGATCGTCTACCATGTTCCAGGCTGCTTAGGTTGGCTATCCCCAGGGTGGAGGAAGTGAAGGAGGACGAAGACAGTGAAGCTGAGGCTGAGCTGTGTGAGAGAGTTAGGACTGAGTTATCTCGTAATAAAATAGCTGAGCCTAGTGGGAACGGGATTTTCAGTGGTAGTAATGGGGGAGGAGGTGGTGGAATTAAGGGTGTTCTTCCTCCAGTGCTAAAGCCGCCACCTTCTATGCGCTTGCCTGTTCACGAACATACCTGCTCAACATGGGATATTTTGAGCGATTACACTCCTTATGAAGAAGTGAGATCTTCAAAATTTGTTGAAGAAAGGACTGGTTCACCTTCTGAAGGCGATAATGACGATGCAGATGAATCCGAAGTGGATGAAGCAGTAGTCGAGCAAGAAGAGGAGGGGATCACAGGTAGACTTGACGATAGTCTTCTTGAACAGTCAAATTCACCTTCATTTTCAACTTCGAATGATGATGATTCTTCAGGCACAATCTCGGAGCCTTTTATATCTCCAAATAGGAAGCTGAAGCGCACTATTTCGAACTGGGACAAGGGTGAGCTTCTAGGGCGAGGATCATTTGGATCCGTGTATGAAGGAATTTCCGGTGATGGAACTTTTTTTGCTATCAAGGAAGTTTCACTGCTTGATCATGACAATCAGGGAAGGCAAAGTATCATTCAGCTTCAGCAGGAGATTGCGCTGCTAAGTCACTTTGAGCACAAGAATATAGTGCAATATTATGGTACCGAGAAGAATGAATCACAACTATTCATTTTTCTTGAGCTTATGGAGAAGGGATCTCTTGTGAAGCTCTATCAGAGGTATAATCTGAAAGATTCCCAAGTTTCTGCTTATACAAGACAAATTTTGTGTGGTTTGAAGTATCTTCATGATCAAAACGTGGTTCACAGGGATATTAAATGTTCGAATATATTAGTGGATGCCAGTGGAGCAGTGAAGCTTGCGGATTTTGGGTTGGCAAAGGCAACAAAAATGAATGATATTAAATCCTGCAAGGGAACAGCATTTTGGATGGCACCCGAGGTTGTTAATGGGAAGAACCAAGGATATGGTCATCCAGCTGATATTTGGAGTCTTGGGTGCACAGTATTGGAGATGTTGACAAGGAAATTTCCGTACTCTGAGTTTGGATGTCATATGGCAGCATTGTATAGGATTGGAAATGGTCAACGGCCATCGGTTCAGGATTCTCTATCAACAGATGCACATGATTTTATAATTCAGTGCTTACAAGCTAACCCACATGACCGTCCAACAGCTGCTCAACTCTTAGAGCATCCATTTGTGAAGAGAGCTCTTCCCACTTCCTCTTGGCCTCCATCAACTTACTCTTCTGGCCGAAGGACATAA 1662 45.37 MDWKNRRSSPRLERCNAAKRIEYDALAASSSLDGSYGSMHTRWLKFPDRTSFRIEGIDGEVDRICLSLGLSGPDDFAIPEAAYESKKVRSSSDRLPCSRLLRLAIPRVEEVKEDEDSEAEAELCERVRTELSRNKIAEPSGNGIFSGSNGGGGGGIKGVLPPVLKPPPSMRLPVHEHTCSTWDILSDYTPYEEVRSSKFVEERTGSPSEGDNDDADESEVDEAVVEQEEEGITGRLDDSLLEQSNSPSFSTSNDDDSSGTISEPFISPNRKLKRTISNWDKGELLGRGSFGSVYEGISGDGTFFAIKEVSLLDHDNQGRQSIIQLQQEIALLSHFEHKNIVQYYGTEKNESQLFIFLELMEKGSLVKLYQRYNLKDSQVSAYTRQILCGLKYLHDQNVVHRDIKCSNILVDASGAVKLADFGLAKATKMNDIKSCKGTAFWMAPEVVNGKNQGYGHPADIWSLGCTVLEMLTRKFPYSEFGCHMAALYRIGNGQRPSVQDSLSTDAHDFIIQCLQANPHDRPTAAQLLEHPFVKRALPTSSWPPSTYSSGRRT 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2518061 2524804 - Bma014696.1 Bma02g00241 77491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00241 553 MobiDBLite consensus disorder prediction 137 164 - -
Bma02g00241 553 MobiDBLite consensus disorder prediction 196 265 - -
Bma02g00241 553 ProSiteProfiles Protein kinase domain profile. 279 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00241 553 PRINTS Tyrosine kinase catalytic domain signature 458 480 IPR001245 GO:0004672|GO:0006468
Bma02g00241 553 PRINTS Tyrosine kinase catalytic domain signature 392 410 IPR001245 GO:0004672|GO:0006468
Bma02g00241 553 PRINTS Tyrosine kinase catalytic domain signature 357 370 IPR001245 GO:0004672|GO:0006468
Bma02g00241 553 PRINTS Tyrosine kinase catalytic domain signature 502 524 IPR001245 GO:0004672|GO:0006468
Bma02g00241 553 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 153 536 - -
Bma02g00241 553 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 4 103 - -
Bma02g00241 553 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 153 536 - -
Bma02g00241 553 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 4 103 - -
Bma02g00241 553 SUPERFAMILY Protein kinase-like (PK-like) 255 545 IPR011009 -
Bma02g00241 553 SMART serkin_6 279 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00241 553 MobiDBLite consensus disorder prediction 196 210 - -
Bma02g00241 553 Pfam Protein kinase domain 281 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00241 553 Gene3D Transferase(Phosphotransferase) domain 1 276 547 - -
Bma02g00241 553 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Bma02g00241 553 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Bma02g00241 553 MobiDBLite consensus disorder prediction 238 265 - -
Bma02g00241 553 MobiDBLite consensus disorder prediction 211 227 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g02638 Bma02g00241 CCT
Bma01g00841 Bma02g00241 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00844 Bma-Chr1:7981915 Bma02g00241 Bma-Chr2:2518061 0 dispersed
Bma02g00241 Bma-Chr2:2518061 Bma04g01702 Bma-Chr4:53259009 1.28E-123 dispersed
Bma02g00233 Bma-Chr2:2438123 Bma02g00241 Bma-Chr2:2518061 6.59E-23 proximal
Bma10g00703 Bma-Chr10:10617046 Bma02g00241 Bma-Chr2:2518061 7.56E-37 transposed
Bma01g00841 Bma-Chr1:7951419 Bma02g00241 Bma-Chr2:2518061 2.08E-172 wgd
Bma01g02638 Bma-Chr1:83891178 Bma02g00241 Bma-Chr2:2518061 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66336 PF00069 Pkinase 1.20E-69 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00241 K13414 - rcu:8274146 612.453