Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00255 CAGGTTCAGAGACGTTTGGAACAAAACCGTGAGGCTGCTCGTAAAAGTCGTCAAAGAAAAAAGGCATATGTCCAACATTTAGAAACCAGCCGTTTGAAGCTGGCACAGTTGGAGCAGGAACTAATGAGAATCCAACGACAGGGTCTGTACACATCCAATGGAATGGACCCGGGATTATATGGAACAATAAACCCAGTAATTGCTGCATTTGAAATGGAGTATGCAATCTGGATTGGTGAGCAACAGAAACAGGAAAGTGGACTTAGAAATGCTTTGCAAGCTCAAGCAACAGATCTAGAGCTTCAGTATCTTGTTGACAGTGCCTTGAATCACTACTACAGTCTTTTTCGCATGAAGTCAGATGCTGCAAAAGGTGATGTTTTCTACTTGTTGTCTGGCACATGGAGAACACCAGCTGAACGGTTTTTCCTTTGGATTGGAGGATTTCGCCCATCGCAGCTTCTAAATGTTCTGACACCCCATTTTGGGCCCTTAACAGAGGAGCAAGTGTTGCATATCAGTAATCTGAGACAATCATGTCAAGAAACTGAGTATGCTCTCTCACAGGGAATAGATAAACTGCATCAGGTTATACTGCAAACCGTATCAGCAAATACCCTGAGTTCAGGAAGTTTTGTTTCCCAGATGGCTGATGCAATGGAAAAGTTCGAAGCACTGGAGCATTTTGTGAGCCAGTTATTAAGCAATTTTCTTAAACAGGCAGACCATCTTCGGCAACAAACCCTGCAGCGGATGTCTCACATCCTACTGACAGAGCAAACGGCACGCGGTTTGCTTGCCTTAGGAGAGTACTTCCATCGTCTTCGTGCGCTTAGTTCACTTTGGACGTCCTGTTCTCGTGAACCCTCATCATAG 876 44.63 QVQRRLEQNREAARKSRQRKKAYVQHLETSRLKLAQLEQELMRIQRQGLYTSNGMDPGLYGTINPVIAAFEMEYAIWIGEQQKQESGLRNALQAQATDLELQYLVDSALNHYYSLFRMKSDAAKGDVFYLLSGTWRTPAERFFLWIGGFRPSQLLNVLTPHFGPLTEEQVLHISNLRQSCQETEYALSQGIDKLHQVILQTVSANTLSSGSFVSQMADAMEKFEALEHFVSQLLSNFLKQADHLRQQTLQRMSHILLTEQTARGLLALGEYFHRLRALSSLWTSCSREPSS 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2711700 2714291 + Bma014711.1 Bma02g00255 77505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00255 291 PANTHER TRANSCRIPTION FACTOR TGA7 1 289 - -
Bma02g00255 291 Pfam Seed dormancy control 87 159 IPR025422 GO:0006351|GO:0043565
Bma02g00255 291 MobiDBLite consensus disorder prediction 1 20 - -
Bma02g00255 291 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 4 19 IPR004827 GO:0003700|GO:0006355
Bma02g00255 291 Pfam bZIP transcription factor 2 36 IPR004827 GO:0003700|GO:0006355
Bma02g00255 291 PANTHER TRANSCRIPTION FACTOR TGA9 1 289 - -
Bma02g00255 291 Coils Coil 20 47 - -
Bma02g00255 291 SUPERFAMILY Leucine zipper domain 3 42 IPR046347 GO:0003700|GO:0006355
Bma02g00255 291 Gene3D - 1 51 - -
Bma02g00255 291 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 1 43 IPR004827 GO:0003700|GO:0006355
Bma02g00255 291 ProSiteProfiles DOG1 domain profile. 67 285 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00255 Bma-Chr2:2711700 Bma03g00419 Bma-Chr3:3186899 5.11E-92 dispersed
Bma01g00856 Bma-Chr1:8069629 Bma02g00255 Bma-Chr2:2711700 3.00E-175 wgd
Bma01g02629 Bma-Chr1:83858647 Bma02g00255 Bma-Chr2:2711700 9.64E-21 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
56857 PF14144 DOG1 4.50E-29 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00255 K14431 - vvi:100255706 374.4