Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00261 ATGGCATTGCAGAATATTGGGGCATCAAACCGCGACGATGCCTTTTATAGATACAAGATGCCAAAAATGATTACCAAAATTGAAGGAAGGGGTAATGGCATCAAGACCAATGTGGTTAACATGGTTGAGATAGCAAAAGCATTGGCTAGACCTGCTTCTTACACTACAAAGTTTTTTGGTTGTGAGCTTGGAGCGCAGTCCAAGTTTGACGAAAAGACTGGCACTTCATTGGTGAATGGTGCTCATGACACATCAAAACTTGCTGGTCTTCTTGAGAATTTCATCAAGAAGTATGTTCAATGCTATGGTTGTGGGAACCCTGAAACTGAAATTATCATTACAAAGACACAGATGATCACATTGAAATGTGCTGCATGTGGGTTCCTTTCAGATGTTGACATGAGGTGCAAGCTTACAACATTTATTCTCAAGAACCCACCTGAGTCTAAAAAGTCGTCAAAAGATAAGAAAGCTATGAGGAGGGCTGAGAAGGAACGACTTAAAGAGGGTGAGGCTGTCGATGAGGAACAGAAGAAGCTGAAGAAGGAATCAGCAAAGAAGAAAAGCACTTCTAGCAGCACAAAAGATGTGGTTTCCAAAACATCAAGCAAGAAGAAAAATAATGCTTCTGATGAGGAACATTCCCCAGCTCACAGTCATTCTGATGATAATGACCAACCAGATGCTGATGATGACAATGACAATGATGTTCAGTGGCAGACAGACACGTCACTGGAAGCTGCCAAGCAGCGTATCCAGGAGCAGCTGAGTGCTGTTACTGCTGATATGGTGATGCTTACTACTGAGGAAGAGAAGCAGAAGTCAAAGAAGTCTTCAGAACAGGAAAGCGCAACTCAGACTAATGGTCATCAAAATGGAAATGGTGTTTCTTCCCATGGAAAGCTCGTTAATGAAATAAGGGCATACTTAAAGAACGGTTCTCCTGCTGCCCAGCTGAAATCGTTTTTAAATTCTCTAGCAGGTACGCCACAAGAAGTCATGGATGCCCTTCTTGATGCCCTTTTTGAAGGTGCTGGAAAGGGTTTCTCTAAAGATGTGGTGAAAAAGAAGAGTTATCTTGCCGCAGCTGTTCAAGAGGAAGGATCTCAGCCAATTCTGTTGGGTGCTATTGAGACCTTCTGTTTGAAAGCAAACCCTGAAGCTGGACGAGAGGTGGCGTTGGTTTTGAAAGCTCTCTACGACAACGATGTGTTGGAGGAGGAGTTTATAGTAGCTTGGTACCGGCAGGGTTTGAAAGGCAGCAATAAGAGTTCCCCGATGTGGAAGAATGTGAACCCCTTCATTGAGTGGCTCCAGAGTGCCGAGTCAGAGACCGAAGACTAG 1344 43.82 MALQNIGASNRDDAFYRYKMPKMITKIEGRGNGIKTNVVNMVEIAKALARPASYTTKFFGCELGAQSKFDEKTGTSLVNGAHDTSKLAGLLENFIKKYVQCYGCGNPETEIIITKTQMITLKCAACGFLSDVDMRCKLTTFILKNPPESKKSSKDKKAMRRAEKERLKEGEAVDEEQKKLKKESAKKKSTSSSTKDVVSKTSSKKKNNASDEEHSPAHSHSDDNDQPDADDDNDNDVQWQTDTSLEAAKQRIQEQLSAVTADMVMLTTEEEKQKSKKSSEQESATQTNGHQNGNGVSSHGKLVNEIRAYLKNGSPAAQLKSFLNSLAGTPQEVMDALLDALFEGAGKGFSKDVVKKKSYLAAAVQEEGSQPILLGAIETFCLKANPEAGREVALVLKALYDNDVLEEEFIVAWYRQGLKGSNKSSPMWKNVNPFIEWLQSAESETED 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2745855 2747198 - Bma014717.1 Bma02g00261 77511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00261 447 CDD W2_eIF5 297 446 - -
Bma02g00261 447 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Bma02g00261 447 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 5-1-RELATED 1 447 - -
Bma02g00261 447 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
Bma02g00261 447 SMART 542_3 357 444 IPR003307 GO:0005515
Bma02g00261 447 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Bma02g00261 447 Coils Coil 159 179 - -
Bma02g00261 447 Pfam eIF4-gamma/eIF5/eIF2-epsilon 373 447 IPR003307 GO:0005515
Bma02g00261 447 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Bma02g00261 447 SUPERFAMILY ARM repeat 301 442 IPR016024 -
Bma02g00261 447 MobiDBLite consensus disorder prediction 269 299 - -
Bma02g00261 447 MobiDBLite consensus disorder prediction 147 237 - -
Bma02g00261 447 MobiDBLite consensus disorder prediction 280 299 - -
Bma02g00261 447 MobiDBLite consensus disorder prediction 199 225 - -
Bma02g00261 447 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 1 447 IPR045196 GO:0003743|GO:0006413
Bma02g00261 447 ProSiteProfiles W2 domain profile. 270 447 IPR003307 GO:0005515
Bma02g00261 447 Gene3D - 105 145 - -
Bma02g00261 447 MobiDBLite consensus disorder prediction 148 190 - -
Bma02g00261 447 Gene3D - 2 104 - -
Bma02g00261 447 Gene3D - 261 439 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00195 Bma-Chr5:5420292 Bma02g00261 Bma-Chr2:2745855 7.93E-10 transposed
Bma11g00051 Bma-Chr11:610200 Bma02g00261 Bma-Chr2:2745855 6.77E-09 transposed
Bma01g00861 Bma-Chr1:8097238 Bma02g00261 Bma-Chr2:2745855 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00261 K03262 - csv:101210873 620.928