Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00263 ACTGGGGACATGGACTTGATTGAAGGAGTCGGAGAGAGCTCCTCACCGCCTAGAAGCTTCGGAGGTTTCTCGAACCACGACGTCCGACTTGATGTTTATAACCGGCTGGTGGAGAGTAGACACGAGGACGCTGTGTGTAATCCTGAGTTTCGTGAGCAGTTGGATGCTCATTTCAATCGTTTGCCTCCTAGTTATGGATTTGATGTCAATATGGAGAGAGTTGAGGATGTTCTTTTACATCAAAAGCTTCTTGCTTTAGCAAAGGACCCAAAGAATCGGCCTGTTTGTTATATTCGTTTTTTAGAGTTGGTTAGCGTAGGAAAAAAATTTAATCACATATGTTGCAGATTAGATAGTAATGGTGATCAAGAAATTTCCAGTAATATTTCGACTGCTAGGCCATATGTGGAAGCAGCCGACAAAAGAGTTCTGCCACCACACAAGAGAATTGTACTCAGTGAATTTTTGTCATGTTTCAGGCTTGAGGACTTAAACTTGGATGTCAAAAAAAATGGGGAGGACATCAGTGACAGATATCTTTCGGAGAATTCTTCCACAAGGCAAGATAACTTGTATGTTTTTATTCACGAAGTTATATTTTCTACTATTGACAAACCTAAGCTTCTAAGCCAGCTTTCTTCATTGCTTTCTGATATAGGACTTAACATTCGCGAAGCACATGTATTCTCGACAAATGATGGCTATTCCTTGGATGTGTTTGTGGTGGATGGATGGCCTATTGAGGATACAGATGGTTTATATGATGCCATGCAAAAAGCAATTGCTAGAAGTGAGGGATCATGGTCTTGTTTCTCTCGTTCTCATTCAGAAGTGGAGAAAACATTGACATCATTACCAAAATGTGGGGGCTGGGAAATAGACAGAAGGTTATTAAAGATTGGTGAGCGAATTGCATCAGGATCCTGTGGAGATTTGTACCTAGGAGTATATCTTGGTCAAGATGTAGCTGTTAAAATTCTTCGATCTGAACATTTAAATGATGCTTTGGAAGATGAATTTGCTCAAGAAGTGGCGATACTGAGAGAGGTCCAACATAAAAATGTTGTACGCTTCATTGGAGCGTGCACAAAGTCTCCTCATTTGTGCATAGTAACAGAATATATGCCAGGAGGAAGCCTTTACGATTATTTGCATAAGAATCACAATGTCTTAAAGCTCTCTCGATTATTGAAATTTGCTATTGATGTCTGCCAAGGAATGGAGTATTTACATCTAAACAACATCATTCATAAAGATTTAAAGACGGCAAATTTGCTAATGGACACTGAAAATGTTGTTAAGGTTGCAGATTTTGGCGTTGCCCGATTCCAAAATGAAGAGGGAGTGATGACTGCTGAAACCGGAACCTATAGATGGATGGCGCCTGAGATCATAAACCACCAGCCATATGATCAGAAGGCAGATGTATTCAGTTTTGCTATTGTACTGTGGGAACTAGTGACTGCAAAGGTTCCTTACGATACCTTGACTCCTTTGCAAGCTGCTCTTGGAGTGAGACAGGTTTGA 1527 40.54 TGDMDLIEGVGESSSPPRSFGGFSNHDVRLDVYNRLVESRHEDAVCNPEFREQLDAHFNRLPPSYGFDVNMERVEDVLLHQKLLALAKDPKNRPVCYIRFLELVSVGKKFNHICCRLDSNGDQEISSNISTARPYVEAADKRVLPPHKRIVLSEFLSCFRLEDLNLDVKKNGEDISDRYLSENSSTRQDNLYVFIHEVIFSTIDKPKLLSQLSSLLSDIGLNIREAHVFSTNDGYSLDVFVVDGWPIEDTDGLYDAMQKAIARSEGSWSCFSRSHSEVEKTLTSLPKCGGWEIDRRLLKIGERIASGSCGDLYLGVYLGQDVAVKILRSEHLNDALEDEFAQEVAILREVQHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLKLSRLLKFAIDVCQGMEYLHLNNIIHKDLKTANLLMDTENVVKVADFGVARFQNEEGVMTAETGTYRWMAPEIINHQPYDQKADVFSFAIVLWELVTAKVPYDTLTPLQAALGVRQV 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2773467 2783627 + Bma014720.1 Bma02g00263 77513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00263 508 PRINTS Tyrosine kinase catalytic domain signature 372 385 IPR001245 GO:0004672|GO:0006468
Bma02g00263 508 PRINTS Tyrosine kinase catalytic domain signature 455 465 IPR001245 GO:0004672|GO:0006468
Bma02g00263 508 PRINTS Tyrosine kinase catalytic domain signature 474 496 IPR001245 GO:0004672|GO:0006468
Bma02g00263 508 PRINTS Tyrosine kinase catalytic domain signature 409 427 IPR001245 GO:0004672|GO:0006468
Bma02g00263 508 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 507 - -
Bma02g00263 508 Gene3D Transferase(Phosphotransferase) domain 1 376 507 - -
Bma02g00263 508 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 507 - -
Bma02g00263 508 MobiDBLite consensus disorder prediction 1 22 - -
Bma02g00263 508 SUPERFAMILY ACT-like 196 266 IPR045865 -
Bma02g00263 508 Gene3D Phosphorylase Kinase; domain 1 287 375 - -
Bma02g00263 508 SUPERFAMILY Protein kinase-like (PK-like) 279 502 IPR011009 -
Bma02g00263 508 Pfam Protein tyrosine and serine/threonine kinase 298 500 IPR001245 GO:0004672|GO:0006468
Bma02g00263 508 SMART serkin_6 298 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00263 508 ProSiteProfiles ACT domain profile. 197 275 IPR002912 -
Bma02g00263 508 CDD STKc_MAP3K-like 304 507 - -
Bma02g00263 508 ProSiteProfiles Protein kinase domain profile. 298 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00263 508 ProSitePatterns Serine/Threonine protein kinases active-site signature. 415 427 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00263 Bma-Chr2:2773467 Bma02g00273 Bma-Chr2:3146587 0 dispersed
Bma02g00263 Bma-Chr2:2773467 Bma02g00265 Bma-Chr2:2816445 0 proximal
Bma01g00863 Bma-Chr1:8108313 Bma02g00263 Bma-Chr2:2773467 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66337 PF07714 PK_Tyr_Ser-Thr 1.20E-59 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00263 - - qlo:115975047 764.222