Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00265 ATGGACTTGATTGAAGGAGTCGGAGAGAGCTCCTCACCACCTAGAAGCTTCGGAGGTTTCTCGAACCACGACGTCCGACTTCATGTTTATAACCGGCTGGTGGAGAGTAGACACGAGGACGCTGTGTGTAATCCTGATTTTCGGGAGCAGTTGGATGCTCATTTCAATCGTTTGCCTCCTAGTTATGGATTTGATGTCAATATGGAGAGAGTTGAGGATGTTCTTTTACATCAAAAGCTTCTTGCTTTAGCAAAGGACCCAAAGAATCGGCCTGTTTGTCATATTCGTTTTTTAGAGTTGGTTAACGTAGCAAAAAACTTTAATCACATATGTTGCAGATTAGATAGCAATGGCAATCAAGAAATTTCCAGTAATATTTCTACTGCTAGGCCATATGTGGAAGCAGCCGACAAAAGAGTTCTGCCACCACACAAGAGGTTATTTTCCTTCATTGAGAATTGTACCCGTGAATTTTTGCCATGTTTCAGGCTTGAGGACTTAAACTTGGATGTCAAAAAAAATGGGGAGGACATCAGTGACAGATATCTTTCGGAGAATTCTTCCACAAGGCAAGATAACTTGTATGTTTTTATTCACGAAGTTATATTTTCTACTATCGACAAACCTAAGCTTCTAAGCCAGCTTTCTTCATTGCTTTCTGATATAGGACTTAACATTCGCGAAGCACATGTATTCTCGACAAATGATGGCTATTCCTTGGATGTGTTTGTGGTGGATGGATGGCCTATTGAGGATACAGATGGTTTATATGATGCCATGCAAAAAGCAATTGCTAGAAGTGAGGGATCATGGTCTTGTTTCTCTCGTTCTCATTCAGAAGTGGGGAAAACATTGGCATCATTACCAAAATGTGGGGGCTGGGAAATAGACAGAAGGTTATTAAAGATTGGTGAGCGAATTGCATCAGGATCCTGTGGAGATTTGTACCTAGGAGTATATCTTGATCAAGATGTAGCTGTTAAAATTCTTCGATCCGAACATTTAAATGATGCTTTGGAAGATGAATTTGCTCAAGAAGTGGCGATACTGAGAGAGGTCCAACATAAAAATGTTGTACGCTTCATTGGAGCGTGCACAAAGTCTCCTCATTTGTGCATAGTAACAGAATATATGCCAGGAGGAAGCCTTTACGATTATTTGCATAAGAATCACAATGTCTTAAAGCTCTCTCGATTATTGAAATTTGCTATTGATGTCTGCCAAGGAATGGAGTATTTGCATCTAAACAACATCATTCATAGAGATTTAAAGACGGCAAATTTGCTAATGGACACTGAAAATGTTGTTAAGGTTGCAGATTTTGGCGTTGCCCGATTCCAAAATGAAGAGGGAGTGATGACTGCTGAAACCGGAACCTATAGATGGATGGCGCCTGAGATCATAAACCACCAGCCATATGATCAGAAGGCAGATGTATTCAGTTTTGCTATTGTACTGTGGGAACTAGTGACTGCAAAGGTTCCTTACGATACCTTGACTCCTTTGCAAGCTGCTCTTGGAGTGAGACAGGGATTACGTCCAGATCTTCCTGAAAATGCACACCCCAAACTGTTGGAACTAATGCAGAGATGTTGGGACGATGTTCCTACAAACCGGCCTTCATTCACAGAGATAAAAGCTAAACTTGAAAATCTACTCAAACTTCAGGTATCTTTGAATTTTTTTTTGGGCTTGAAAGTTTTTATTTTTAAATCTCTTCAAATACTTGTTCTCTCCAGAAATTCCCCCTCCTTTTCAAATCTTTTTTCATCTTAG 1776 40.15 MDLIEGVGESSSPPRSFGGFSNHDVRLHVYNRLVESRHEDAVCNPDFREQLDAHFNRLPPSYGFDVNMERVEDVLLHQKLLALAKDPKNRPVCHIRFLELVNVAKNFNHICCRLDSNGNQEISSNISTARPYVEAADKRVLPPHKRLFSFIENCTREFLPCFRLEDLNLDVKKNGEDISDRYLSENSSTRQDNLYVFIHEVIFSTIDKPKLLSQLSSLLSDIGLNIREAHVFSTNDGYSLDVFVVDGWPIEDTDGLYDAMQKAIARSEGSWSCFSRSHSEVGKTLASLPKCGGWEIDRRLLKIGERIASGSCGDLYLGVYLDQDVAVKILRSEHLNDALEDEFAQEVAILREVQHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLKLSRLLKFAIDVCQGMEYLHLNNIIHRDLKTANLLMDTENVVKVADFGVARFQNEEGVMTAETGTYRWMAPEIINHQPYDQKADVFSFAIVLWELVTAKVPYDTLTPLQAALGVRQGLRPDLPENAHPKLLELMQRCWDDVPTNRPSFTEIKAKLENLLKLQVSLNFFLGLKVFIFKSLQILVLSRNSPSFSNLFSS 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2816445 2828942 + Bma014722.1 Bma02g00265 77515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00265 591 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 109 - -
Bma02g00265 591 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 145 555 - -
Bma02g00265 591 SUPERFAMILY Protein kinase-like (PK-like) 294 574 IPR011009 -
Bma02g00265 591 SMART serkin_6 301 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00265 591 SUPERFAMILY ACT-like 199 268 IPR045865 -
Bma02g00265 591 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 10 109 - -
Bma02g00265 591 PRINTS Tyrosine kinase catalytic domain signature 375 388 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 PRINTS Tyrosine kinase catalytic domain signature 477 499 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 PRINTS Tyrosine kinase catalytic domain signature 520 542 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 PRINTS Tyrosine kinase catalytic domain signature 458 468 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 PRINTS Tyrosine kinase catalytic domain signature 412 430 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 145 555 - -
Bma02g00265 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Bma02g00265 591 ProSiteProfiles Protein kinase domain profile. 301 553 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00265 591 Gene3D Transferase(Phosphotransferase) domain 1 379 561 - -
Bma02g00265 591 CDD STKc_MAP3K-like 307 545 - -
Bma02g00265 591 Pfam Protein tyrosine and serine/threonine kinase 301 549 IPR001245 GO:0004672|GO:0006468
Bma02g00265 591 Gene3D Phosphorylase Kinase; domain 1 290 378 - -
Bma02g00265 591 ProSiteProfiles ACT domain profile. 200 278 IPR002912 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00863 Bma-Chr1:8108313 Bma02g00265 Bma-Chr2:2816445 0 dispersed
Bma01g00872 Bma-Chr1:8184087 Bma02g00265 Bma-Chr2:2816445 0 dispersed
Bma02g00265 Bma-Chr2:2816445 Bma12g00909 Bma-Chr12:40538335 2.47E-177 dispersed
Bma02g00263 Bma-Chr2:2773467 Bma02g00265 Bma-Chr2:2816445 0 proximal
Bma02g00265 Bma-Chr2:2816445 Bma02g00273 Bma-Chr2:3146587 0 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66338 PF07714 PK_Tyr_Ser-Thr 3.30E-73 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00265 - - qlo:115975047 831.632