Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00273 | ACTGGGGAGATGGACTTGATTGAAGGAGTCGGAGAGAGCTCCTCACCGCCTAGAAGCTTCGGAGGTTTCTCGAACCACGACGTCCGACTTGATGTTTATAACCGGCTGGTGGAGACTAGACACGAGGACGCTGTGTGTAATCCTGAGTTTCGGGAGCAGTTGGATGCTCATTTCAATCGTTTGCCTTCTAGTTACGGATTTGATGTCAATATGGAGAGAGTTGAGGATGTTCTTTTACATCAAAAGCTTCTTGCTTTAGCAAAGGACCCAAAGAATCGGCCTGTTTGTCATATTCGTTTTTTAGAGGATAAAATGACTTACTTTGAATTGTCAATTTGTGCCATATTTTTGCGTAATTTTCTTAATTCTGTTAATAAAACAGAGAATTGTACGCTTGAATTTTTGCCATGTTTCAGGCTTGAGGACTTAAATTTGGATGTCAAAAAAAATGGGGAGGACATCAGTGACAGATATCTTTCGGAGAATTCTTCCACAAGGCAAGATAACTTGTATGTTTTTATTCACGAAGTTATATTTTCTACTATCGACAAACCTAAGCTTCTAAGCCAGCTTTCTTCATTGCTTTCTGATATAGGACTTAACATTCGCGAAGCACATGTATTCTCGACAAATGATGGCTATTCCTTGGATGTGTTTGTGGTGGATGGATGGCCTATTGAGGATACAGAAGGTTTATGTGATGCCATGCAAAAAGCAATTGCTAGAAGTGAGGGATCATGGTCTTATTTCTCTCGTTCTCATTCAGAAGTGGGGAAAACATTGGCATCATTACCAAAATGTGGGGGCTGGGAAATAGACAGAAGGTTATTAAAGATTGGTGAGCGAATTGCATCAGGATCCTGTGGAGATTTGTACCTAGGAGTATATCTTGATCAAGATGTAGCTGTTAAAATTCTTCGATCCGAACATTTAAATGATGCTTTGGAAGATGAATTTGCTCAAGAAGTGGCGATACTGAGAGAGGTCCAACATAAAAATGTTGTACGCTTCATTGGAGCGTGCACAAAGTCTCCTCATTTGTGCATAGTAACAGAATATATGCCAGGAGGAAGCCTTTACGATTATTTGCATAAGAATCACAATGTCTTAAAGCTCTCTCGATTATTGAAATTTGCTATTGATGTCTGCCAAGGAATGGAGTATTTGCATCTAAACAACATCATTCATAGAGATTTAAAGACGGCAAATTTACTAATAGACACTGAAAATGTTGTTAAGGTTGCAGATTTTGGCGTTGCTCGATTCCAAAATGAAGAGGGAGTGATGACTGCTGAAACCGGAACCTATAGATGGATGGCGCCTGAGATCATAAACCACCAGCCATATGATCAGAAGGCAGATGTATTCAGTTTTGCTATTGTACTGTGGGAACTAGTGACTGCAAAGGTTCCTTACGATACCTTGACTCCTTTGCAAGCTGCTCTTGGAGTGAGACAGGGATTACGTCCAGATCTTCCTGAAAATGCACACCCCAAACTGTTGGAACTAATGCAGAGATGTTGGGACGATGTTCCTACAAACCGGCCTTCATTCACCGAGATAAAATCTCAACTTGAAAATCTACTCAAA | 1590 | 40.44 | TGEMDLIEGVGESSSPPRSFGGFSNHDVRLDVYNRLVETRHEDAVCNPEFREQLDAHFNRLPSSYGFDVNMERVEDVLLHQKLLALAKDPKNRPVCHIRFLEDKMTYFELSICAIFLRNFLNSVNKTENCTLEFLPCFRLEDLNLDVKKNGEDISDRYLSENSSTRQDNLYVFIHEVIFSTIDKPKLLSQLSSLLSDIGLNIREAHVFSTNDGYSLDVFVVDGWPIEDTEGLCDAMQKAIARSEGSWSYFSRSHSEVGKTLASLPKCGGWEIDRRLLKIGERIASGSCGDLYLGVYLDQDVAVKILRSEHLNDALEDEFAQEVAILREVQHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLKLSRLLKFAIDVCQGMEYLHLNNIIHRDLKTANLLIDTENVVKVADFGVARFQNEEGVMTAETGTYRWMAPEIINHQPYDQKADVFSFAIVLWELVTAKVPYDTLTPLQAALGVRQGLRPDLPENAHPKLLELMQRCWDDVPTNRPSFTEIKSQLENLLK | 530 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3146587 | 3157587 | + | Bma030870 | Bma02g00273 | 77523 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00273 | 530 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 394 | 406 | IPR008271 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | ProSiteProfiles | Protein kinase domain profile. | 277 | 529 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00273 | 530 | PANTHER | SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED | 13 | 530 | - | - | |
Bma02g00273 | 530 | SUPERFAMILY | ACT-like | 175 | 247 | IPR045865 | - | |
Bma02g00273 | 530 | Gene3D | Phosphorylase Kinase; domain 1 | 266 | 354 | - | - | |
Bma02g00273 | 530 | SUPERFAMILY | Protein kinase-like (PK-like) | 260 | 525 | IPR011009 | - | |
Bma02g00273 | 530 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 13 | 530 | - | - | |
Bma02g00273 | 530 | Gene3D | Transferase(Phosphotransferase) domain 1 | 355 | 530 | - | - | |
Bma02g00273 | 530 | Pfam | Protein tyrosine and serine/threonine kinase | 277 | 525 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | SMART | serkin_6 | 277 | 529 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma02g00273 | 530 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bma02g00273 | 530 | CDD | STKc_MAP3K-like | 283 | 525 | - | - | |
Bma02g00273 | 530 | ProSiteProfiles | ACT domain profile. | 176 | 254 | IPR002912 | - | |
Bma02g00273 | 530 | PRINTS | Tyrosine kinase catalytic domain signature | 388 | 406 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | PRINTS | Tyrosine kinase catalytic domain signature | 434 | 444 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | PRINTS | Tyrosine kinase catalytic domain signature | 453 | 475 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | PRINTS | Tyrosine kinase catalytic domain signature | 351 | 364 | IPR001245 | GO:0004672|GO:0006468 | |
Bma02g00273 | 530 | PRINTS | Tyrosine kinase catalytic domain signature | 496 | 518 | IPR001245 | GO:0004672|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00863 | Bma02g00273 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00263 | Bma-Chr2:2773467 | Bma02g00273 | Bma-Chr2:3146587 | 0 | dispersed | |
Bma02g00273 | Bma-Chr2:3146587 | Bma12g00909 | Bma-Chr12:40538335 | 0 | dispersed | |
Bma15g00145 | Bma-Chr15:1509297 | Bma02g00273 | Bma-Chr2:3146587 | 1.53E-57 | dispersed | |
Bma02g00265 | Bma-Chr2:2816445 | Bma02g00273 | Bma-Chr2:3146587 | 0 | proximal | |
Bma01g00863 | Bma-Chr1:8108313 | Bma02g00273 | Bma-Chr2:3146587 | 0 | wgd | |
Bma01g00872 | Bma-Chr1:8184087 | Bma02g00273 | Bma-Chr2:3146587 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66339 | PF07714 | PK_Tyr_Ser-Thr | 7.60E-74 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00273 | - | - | zju:107403422 | 811.216 |