Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00273 ACTGGGGAGATGGACTTGATTGAAGGAGTCGGAGAGAGCTCCTCACCGCCTAGAAGCTTCGGAGGTTTCTCGAACCACGACGTCCGACTTGATGTTTATAACCGGCTGGTGGAGACTAGACACGAGGACGCTGTGTGTAATCCTGAGTTTCGGGAGCAGTTGGATGCTCATTTCAATCGTTTGCCTTCTAGTTACGGATTTGATGTCAATATGGAGAGAGTTGAGGATGTTCTTTTACATCAAAAGCTTCTTGCTTTAGCAAAGGACCCAAAGAATCGGCCTGTTTGTCATATTCGTTTTTTAGAGGATAAAATGACTTACTTTGAATTGTCAATTTGTGCCATATTTTTGCGTAATTTTCTTAATTCTGTTAATAAAACAGAGAATTGTACGCTTGAATTTTTGCCATGTTTCAGGCTTGAGGACTTAAATTTGGATGTCAAAAAAAATGGGGAGGACATCAGTGACAGATATCTTTCGGAGAATTCTTCCACAAGGCAAGATAACTTGTATGTTTTTATTCACGAAGTTATATTTTCTACTATCGACAAACCTAAGCTTCTAAGCCAGCTTTCTTCATTGCTTTCTGATATAGGACTTAACATTCGCGAAGCACATGTATTCTCGACAAATGATGGCTATTCCTTGGATGTGTTTGTGGTGGATGGATGGCCTATTGAGGATACAGAAGGTTTATGTGATGCCATGCAAAAAGCAATTGCTAGAAGTGAGGGATCATGGTCTTATTTCTCTCGTTCTCATTCAGAAGTGGGGAAAACATTGGCATCATTACCAAAATGTGGGGGCTGGGAAATAGACAGAAGGTTATTAAAGATTGGTGAGCGAATTGCATCAGGATCCTGTGGAGATTTGTACCTAGGAGTATATCTTGATCAAGATGTAGCTGTTAAAATTCTTCGATCCGAACATTTAAATGATGCTTTGGAAGATGAATTTGCTCAAGAAGTGGCGATACTGAGAGAGGTCCAACATAAAAATGTTGTACGCTTCATTGGAGCGTGCACAAAGTCTCCTCATTTGTGCATAGTAACAGAATATATGCCAGGAGGAAGCCTTTACGATTATTTGCATAAGAATCACAATGTCTTAAAGCTCTCTCGATTATTGAAATTTGCTATTGATGTCTGCCAAGGAATGGAGTATTTGCATCTAAACAACATCATTCATAGAGATTTAAAGACGGCAAATTTACTAATAGACACTGAAAATGTTGTTAAGGTTGCAGATTTTGGCGTTGCTCGATTCCAAAATGAAGAGGGAGTGATGACTGCTGAAACCGGAACCTATAGATGGATGGCGCCTGAGATCATAAACCACCAGCCATATGATCAGAAGGCAGATGTATTCAGTTTTGCTATTGTACTGTGGGAACTAGTGACTGCAAAGGTTCCTTACGATACCTTGACTCCTTTGCAAGCTGCTCTTGGAGTGAGACAGGGATTACGTCCAGATCTTCCTGAAAATGCACACCCCAAACTGTTGGAACTAATGCAGAGATGTTGGGACGATGTTCCTACAAACCGGCCTTCATTCACCGAGATAAAATCTCAACTTGAAAATCTACTCAAA 1590 40.44 TGEMDLIEGVGESSSPPRSFGGFSNHDVRLDVYNRLVETRHEDAVCNPEFREQLDAHFNRLPSSYGFDVNMERVEDVLLHQKLLALAKDPKNRPVCHIRFLEDKMTYFELSICAIFLRNFLNSVNKTENCTLEFLPCFRLEDLNLDVKKNGEDISDRYLSENSSTRQDNLYVFIHEVIFSTIDKPKLLSQLSSLLSDIGLNIREAHVFSTNDGYSLDVFVVDGWPIEDTEGLCDAMQKAIARSEGSWSYFSRSHSEVGKTLASLPKCGGWEIDRRLLKIGERIASGSCGDLYLGVYLDQDVAVKILRSEHLNDALEDEFAQEVAILREVQHKNVVRFIGACTKSPHLCIVTEYMPGGSLYDYLHKNHNVLKLSRLLKFAIDVCQGMEYLHLNNIIHRDLKTANLLIDTENVVKVADFGVARFQNEEGVMTAETGTYRWMAPEIINHQPYDQKADVFSFAIVLWELVTAKVPYDTLTPLQAALGVRQGLRPDLPENAHPKLLELMQRCWDDVPTNRPSFTEIKSQLENLLK 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3146587 3157587 + Bma030870 Bma02g00273 77523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00273 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Bma02g00273 530 ProSiteProfiles Protein kinase domain profile. 277 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00273 530 PANTHER SERINE/THREONINE/DUAL SPECIFICITY PROTEIN KINASE, CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 13 530 - -
Bma02g00273 530 SUPERFAMILY ACT-like 175 247 IPR045865 -
Bma02g00273 530 Gene3D Phosphorylase Kinase; domain 1 266 354 - -
Bma02g00273 530 SUPERFAMILY Protein kinase-like (PK-like) 260 525 IPR011009 -
Bma02g00273 530 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 13 530 - -
Bma02g00273 530 Gene3D Transferase(Phosphotransferase) domain 1 355 530 - -
Bma02g00273 530 Pfam Protein tyrosine and serine/threonine kinase 277 525 IPR001245 GO:0004672|GO:0006468
Bma02g00273 530 SMART serkin_6 277 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00273 530 MobiDBLite consensus disorder prediction 1 21 - -
Bma02g00273 530 CDD STKc_MAP3K-like 283 525 - -
Bma02g00273 530 ProSiteProfiles ACT domain profile. 176 254 IPR002912 -
Bma02g00273 530 PRINTS Tyrosine kinase catalytic domain signature 388 406 IPR001245 GO:0004672|GO:0006468
Bma02g00273 530 PRINTS Tyrosine kinase catalytic domain signature 434 444 IPR001245 GO:0004672|GO:0006468
Bma02g00273 530 PRINTS Tyrosine kinase catalytic domain signature 453 475 IPR001245 GO:0004672|GO:0006468
Bma02g00273 530 PRINTS Tyrosine kinase catalytic domain signature 351 364 IPR001245 GO:0004672|GO:0006468
Bma02g00273 530 PRINTS Tyrosine kinase catalytic domain signature 496 518 IPR001245 GO:0004672|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00863 Bma02g00273 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00263 Bma-Chr2:2773467 Bma02g00273 Bma-Chr2:3146587 0 dispersed
Bma02g00273 Bma-Chr2:3146587 Bma12g00909 Bma-Chr12:40538335 0 dispersed
Bma15g00145 Bma-Chr15:1509297 Bma02g00273 Bma-Chr2:3146587 1.53E-57 dispersed
Bma02g00265 Bma-Chr2:2816445 Bma02g00273 Bma-Chr2:3146587 0 proximal
Bma01g00863 Bma-Chr1:8108313 Bma02g00273 Bma-Chr2:3146587 0 wgd
Bma01g00872 Bma-Chr1:8184087 Bma02g00273 Bma-Chr2:3146587 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66339 PF07714 PK_Tyr_Ser-Thr 7.60E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00273 - - zju:107403422 811.216