Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00324 ATGGTCGATGATTGTCGGGTTCTGACCGCTGAAGAACCGGTTTCTATGGAGAAGGGTTTGAGTTCGCATGTTAAGTTGAAGAGGAGACCGGCAAAGATTGTGGTCCCAGAATTTTGTCCGGATTTGTTCGGTGGTCAGATGAAAAAGAAGATGGATGGGAGGGAGTTGATCGAGGTCCGAGGAAGAGATTTTTGTTTGGCTAGCAAGAGAGGAAGGAGGGAGGTAATGGAAGATAGCTATGCAGCCATGGCTGACGTTTTAGGCGATCAAAAACAGGCGTTTTTCGCCGTGATCGACGGGCATGGAGGGCGCAGTGCAGCTGACTACGTTGCAGAAAATCTGGGGAAAAACATAGTGAATGAACTTGCGATGGTTAATGGAGACGAAGAACTGGCAATTCGCAGAGGATATGAAGTTACAGACAATGAGTTCCTTCGTCAGGGTGTGACTAGTGGAGCATGTGCATCAAGTGTGTTAGTGAGAAGAGGAGAGTTGCACGTGGCAAATGTAGGCGATTGTAGAGTAGTGTTGGGTAGAAAAGGAGAGGCCCATCGTCTCACTAACGAACACCGGCTATGCCGAGAGGACGAGCGGGTTCGGATTGAAAACTCAGGCGGTTTCGTGGATTGCCGAAATGGAGTTTGGAGAGTCCAAGGTTGTCTAGCAGTGTCTAGAGCCATTGGAGACCTTCACATGAAAGAGTTGATCATTTCAGAGCCTGAAATCATCAAGCTTCCTTTGACTCCAGATTGTCAATTCTTAATCATGGCTTCTGATGGATTATGGGACAAGGTAAATGAAGAAGAAGCTGTAGGTCTAGTTTGCAAATACTACGACCAAGAAGAAGATCGAATGAAGTGTTGTAAAGAACTAGTCGAGATGTCGTGCAGGAGAGGGAATCTCGACGACATAACTGTTATGGTGGTTGATCTCCAAAGCTTCTGTTGA 948 46.73 MVDDCRVLTAEEPVSMEKGLSSHVKLKRRPAKIVVPEFCPDLFGGQMKKKMDGRELIEVRGRDFCLASKRGRREVMEDSYAAMADVLGDQKQAFFAVIDGHGGRSAADYVAENLGKNIVNELAMVNGDEELAIRRGYEVTDNEFLRQGVTSGACASSVLVRRGELHVANVGDCRVVLGRKGEAHRLTNEHRLCREDERVRIENSGGFVDCRNGVWRVQGCLAVSRAIGDLHMKELIISEPEIIKLPLTPDCQFLIMASDGLWDKVNEEEAVGLVCKYYDQEEDRMKCCKELVEMSCRRGNLDDITVMVVDLQSFC 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4405883 4408267 + Bma014780.1 Bma02g00324 77574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00324 315 PANTHER PROTEIN PHOSPHATASE 2C 21 314 IPR015655 GO:0004722|GO:0006470
Bma02g00324 315 SUPERFAMILY PP2C-like 63 312 IPR036457 -
Bma02g00324 315 CDD PP2Cc 62 311 IPR001932 -
Bma02g00324 315 PANTHER PROTEIN PHOSPHATASE 2C 2-RELATED 21 314 - -
Bma02g00324 315 SMART PP2C_SIG_2 75 311 IPR001932 -
Bma02g00324 315 SMART PP2C_4 53 309 IPR001932 -
Bma02g00324 315 Pfam Protein phosphatase 2C 67 303 IPR001932 -
Bma02g00324 315 ProSiteProfiles PPM-type phosphatase domain profile. 63 311 IPR001932 -
Bma02g00324 315 Gene3D - 57 314 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00324 Bma-Chr2:4405883 Bma03g00241 Bma-Chr3:1838588 6.85E-63 dispersed
Bma10g01306 Bma-Chr10:46439350 Bma02g00324 Bma-Chr2:4405883 1.13E-28 dispersed
Bma02g00324 Bma-Chr2:4405883 Bma01g02182 Bma-Chr1:78713791 5.07E-51 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00324 K17506 - rcu:8277160 393.275