Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00328 ATGTTTTCTTTTGCTGCCAAAACAGCTCTGAATTTGATGAAGAATTTGGAAGTGCAAGCAATTATAGGACCACTTTATTCAATGGAGGCCAACTTCATAATCGGACTGGGAGAGAGAGCTCAAGTCCCCATCATTTCATTCACTGCAACAAGCCCATCACTCACCTCTCTACAGAGTCCTTATTTCTTTCGAATCACCCACAACGACTCCTCACAAGTAAAAGCCATTAGTGCCATCGTTCAAGCTTTTGGATGGCGAATGGTAGTACCCATCTACGAAGACAATAATTTCGGAGAAGGATGGATACCCTACTTGGCCGATGCTTTGCAAGAAGTCGATGCTCGAATCCCCTACAGAAGTGTCATCCCTCAATCAGCTTCTGATGATAGAATTGCTATGGAACTTTACAAGCTGACATCAATGGAGACTAGAGTCTTCGTTGTCCATATGGCGGCTAATCTTTCCTCCAGGCTTTTTACAAGAGCTAAAGAGATTGGAATGATGAGTAAAGGCTATGTTTGGATCATAACAGATGCCGTCACTAATATCCTACCGTCGATTAGTCCTTCGCTGTTGGACTCAATGCAAGGAGTTCTAGGAGTGAGGACTTATGTTCCAGCTTCGATTGAACTCGATAATTTTTCAGTTCGATGGAGAAGGAAGTTCCAGCAAGACAATCCGACCATAGACAACCCTCAACTAAACGTGTTTGGCCTGTGGGGATATGACACTGCTTGGGCACTAGCAATGGCGGTTGAAGAAGTACAAGCTGGAAATCTTGGTTACCAAAAAGCAAATAGTTCCATTAACGACACAGATCTTGAAAATATTGGGGTGTCTCCAAAGGGTCGGGAAATTCGAGATGCATTGGCCAATACTACCTTTAAAGGACTCAGTGGGGAGTTTAGCCTCGTCAATGAACAATTACAGTCGCCAACTTTCGAGATAGTGAACATAAACGGTAGAGGAGGAAGAGTAGTAGGATTTTGGACACCTCAGAAAGGATTGACAAAGACATTAAATTTAACTTGGAAAACCTCGTATTCTACTTCTGCGGATAGTCTAGGACCAATCATATGGCCTGGAGAATCCACGTCAGCTCCTAAGGGATGGGAAGTTCCAACCAATGGGAAGAAATTGAGAGTTGGGGTACCTGTAAAGGATGGGTTTAGTGAATTTGTGACCGTCAAATTTGATTCTGTCACCAACACAACGGAGGTCACCGGCTATTGCATAGACGTATTCATGGCCGTTCTGGAAGAATTGCCATACGCCATAGTTCCGGAATTCATTCCCTTCGCAAAACCCACTAACGAAATGGCTGGAACTTATGATGATTTAGTCTACCAAGTTAACACAGGGGTGGGAAGTTCATAA 1377 43.57 MFSFAAKTALNLMKNLEVQAIIGPLYSMEANFIIGLGERAQVPIISFTATSPSLTSLQSPYFFRITHNDSSQVKAISAIVQAFGWRMVVPIYEDNNFGEGWIPYLADALQEVDARIPYRSVIPQSASDDRIAMELYKLTSMETRVFVVHMAANLSSRLFTRAKEIGMMSKGYVWIITDAVTNILPSISPSLLDSMQGVLGVRTYVPASIELDNFSVRWRRKFQQDNPTIDNPQLNVFGLWGYDTAWALAMAVEEVQAGNLGYQKANSSINDTDLENIGVSPKGREIRDALANTTFKGLSGEFSLVNEQLQSPTFEIVNINGRGGRVVGFWTPQKGLTKTLNLTWKTSYSTSADSLGPIIWPGESTSAPKGWEVPTNGKKLRVGVPVKDGFSEFVTVKFDSVTNTTEVTGYCIDVFMAVLEELPYAIVPEFIPFAKPTNEMAGTYDDLVYQVNTGVGSS 458
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4485146 4486522 + Bma014784.1 Bma02g00328 77578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00328 458 Gene3D - 5 311 - -
Bma02g00328 458 Gene3D - 374 455 - -
Bma02g00328 458 CDD PBP1_GABAb_receptor_plant 5 340 IPR044440 -
Bma02g00328 458 SUPERFAMILY Periplasmic binding protein-like II 357 454 - -
Bma02g00328 458 Pfam Receptor family ligand binding region 3 321 IPR001828 -
Bma02g00328 458 Gene3D - 68 336 - -
Bma02g00328 458 PANTHER OS06G0188250 PROTEIN 5 454 - -
Bma02g00328 458 PANTHER OS06G0188250 PROTEIN 5 454 - -
Bma02g00328 458 SUPERFAMILY Periplasmic binding protein-like I 5 362 IPR028082 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00328 Bma-Chr2:4485146 Bma14g00262 Bma-Chr14:3083093 8.14E-51 dispersed
Bma01g02415 Bma-Chr1:81763424 Bma02g00328 Bma-Chr2:4485146 7.59E-72 transposed
Bma02g00212 Bma-Chr2:2275218 Bma02g00328 Bma-Chr2:4485146 2.05E-85 transposed
Bma08g00666 Bma-Chr8:41152371 Bma02g00328 Bma-Chr2:4485146 2.57E-15 transposed
Bma08g00714 Bma-Chr8:42929176 Bma02g00328 Bma-Chr2:4485146 3.53E-75 transposed
Bma10g00751 Bma-Chr10:11972624 Bma02g00328 Bma-Chr2:4485146 3.31E-174 transposed
Bma12g00800 Bma-Chr12:37363190 Bma02g00328 Bma-Chr2:4485146 8.71E-66 transposed
Bma01g00901 Bma-Chr1:8575762 Bma02g00328 Bma-Chr2:4485146 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00328 K05387 - qsu:112030675 585.874