Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00335 ATGGAGATCCTCAATTCAACAGAACCTCATTATATACGGTGTGTAAAGCCCAATTCTCTTAATCGGCCTCAGAAATTTGAGAATCAAAGTATTCTACACCAACTACGATGTGGGGGTGTTTTAGAAGCTGTGCGGATAAGTTTGGCTGGTTATCCCACTAGAACGTATTCAGAGTTTATAGATCGTTTTGGACTTTTGGCTCCTGAACTCATGGATGGAAGTTATGATGAAAAAGCTACAGTGGAGAAGATTTTACAGAAGTTAAAGCTTAGTAACTTTCAGTTGGGGAGGACAAAAGTGTTTCTTAGAGCTGGTCAAGTTGGTGTTTTAGATGCTCGACGGTCAGAAGTATTGGATAATGCTGCAAAGTGCATTCAACGTAGACTGCGGACACATTATGCACACAAGGAATTCATTTTGCTCCGATGTACTGCAGTTGAACTCCAAGCATACTGCAGAGGATATCTTACTCGAAAGATGTATACTGCAAAACGAGAAACCACTGCTGCTGTATTAATACAAGGAAATGTTCGCAAGTGGCTTTCACAGCGTGCTTATATAAAAATTCATTTTGCTGCTTTAGTTATGCAGTCTAACATTCGTGGTTTCTTATCTCGACAAAAATTTTTGCATGGAAAGAAACATAAAGCAGCAACTTTAATTCAGGCTCGATGGAGAACATACAAAGTTCGTACTGCTTTCCGCCATGACCAAGCTTCCGTGGTTGCTATCCAGTGTCGTTGGCGACAAAAAGTGGCAAAAAGAGAACTTCGAAGGCTTAAGCAAGAGGCCAATGAGGCTGGAGCATTGCGATTAGCTAAAAGTAAACTTGAGAAGCAAATAGAAGAGCTAACATGGCGGTTACATCTAGAAAAGCGACTGCGGGTTTCCAATGAAGAGGCCAAGTCCATTGAAATTTCAAAGCTTCAAAAGATGTTGGCATCTCTTAACCTGGAGTTAGATGCCGCAAAATTAGCAACAATTAATGAGTGCAACAAAAATGAAGTGTTGCTGAATCAATTGGAATTGTCAGTGAAAGAGAAGTCTGCTTTGGAAAGAGAAATTATGACAATGGCAGAGTTGAGAAGGGAAAATGCATTACTTAAAAATTCATTGAAAGCACTGGAGAAAAAAGATTCAGCTCTGGAGCTTGAGCTAATCAATTATCAGAGAGAGAGTGATGAAACCATTGAGAAGCTGAAGGAAGTCGAAGAAAAATATTCTCAGCTTCAGAAGAATGTGAAAAGTTTGGAGGGAAAACTCTTACTTCTAGAAAATGATAATCACGTCCTACGACAAAAGGCATTGAGTGCAACTCCAAAGAGCATCCGGCCTGGCATTATGAAGTCATTATCAGAGAAATCCTCCGGTGCTCTGGGCATTACTCCCCAAGTTGATCAGAAGTCTTTATTTGAGTCACCGACTCCAACAAAACTTACTACTGCACCCTTTTCGCATGGCCTGACAGAATCTCGACGATCAAAGCTGATAATCGAAAGGCATCAGGAGAACTACGAATTCCTCTCTAATTGTATTAAAGAGAATTTGGGCTTTAAAGGTGGTAAACCACTTGCTGCCAGCATCATATACAGATGTCTTCTTCATTGGCGTGCTTTTGAATCTGAAAGGACAGTTATTTTTGACTTCGTAATTGAAGGGATTAATGAAGCTCTGAAGGATGAGGATGAAAGCATTACGTTGCCATATTGGTTGTCCAATTCATCTGCACTGCTATGCCTTCTGCAGAGAAATTTACGATCAAAGGGATTTCTAACTACAACCACTCAGCGTATAACTGGGTCAGCTAGCAGGACTGGGCAAGGGCTAAAATCACCTTTCAAAATCATGGGCTTTGAAGATGGTATATCTCATCTTGAAGCAAGATATCCGGCTATACTCTTTAAACAACAACTCACCGCTTGTGTAGAAAAGATATTTGGCTTGATTCGTGACAACTTGAAAAAAGAGCTATCTCCACTCTTGGGCTTGTGCATTCAGGCACCAAAAACTACTAGAATGCATGCTGGAAAATCCTCAAGATCACCTGGTGGACTTCCTCAGCAACCTCCAACTACGCAGTGGGACAACATCATCAAATTTTTGGATTCTCTGATGAGTCAGTTGCGAAGAAATCATGTACCCTCCTTCTTCATTCGAAAATTAATTACTCAAGTGTTTTCTTTCATCAATATATCACTTTTCAACAGTCTTCTTTTGCGCCGGGAATGTTGTACATTTTCAAATGGAGAATATGTGAAATGTGGGTTAGCAGAACTAGAGAAGTGGATTGTCAATTCCAAAGAAGAGTATGCGGGAACGTCATGGCATGAGCTAAATTATATAAGGCAAGCTGTTGGATTTCTGGTATTAAATCAGAAGAGGAAAAAATCACTTGAAGAGATAAGACAGGATCTTTGTCCGGCACTGACTGTTAGACAAATTTATCGGATAAGTACAATGTACTGGGATGACAAATATGGTACCCAAAGTGTATCTAACGGGGTGGTTGCTGAAATGAGAGAGATTTTGAACAAGGATAATCAAAACTTGACGTCCAATTCCTTTTTGTTGGATGATGATCTAAGCATTCCATTCTCTACTGAAGACATAGATATGGCTATTCCTGCTATAGACCCATACGACATTGAACTACCCGCTTCCTTATCAGAAAATCCCTGCGCACAGTTTTTGATTCGGCGTTAA 2703 40.18 MEILNSTEPHYIRCVKPNSLNRPQKFENQSILHQLRCGGVLEAVRISLAGYPTRTYSEFIDRFGLLAPELMDGSYDEKATVEKILQKLKLSNFQLGRTKVFLRAGQVGVLDARRSEVLDNAAKCIQRRLRTHYAHKEFILLRCTAVELQAYCRGYLTRKMYTAKRETTAAVLIQGNVRKWLSQRAYIKIHFAALVMQSNIRGFLSRQKFLHGKKHKAATLIQARWRTYKVRTAFRHDQASVVAIQCRWRQKVAKRELRRLKQEANEAGALRLAKSKLEKQIEELTWRLHLEKRLRVSNEEAKSIEISKLQKMLASLNLELDAAKLATINECNKNEVLLNQLELSVKEKSALEREIMTMAELRRENALLKNSLKALEKKDSALELELINYQRESDETIEKLKEVEEKYSQLQKNVKSLEGKLLLLENDNHVLRQKALSATPKSIRPGIMKSLSEKSSGALGITPQVDQKSLFESPTPTKLTTAPFSHGLTESRRSKLIIERHQENYEFLSNCIKENLGFKGGKPLAASIIYRCLLHWRAFESERTVIFDFVIEGINEALKDEDESITLPYWLSNSSALLCLLQRNLRSKGFLTTTTQRITGSASRTGQGLKSPFKIMGFEDGISHLEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLGLCIQAPKTTRMHAGKSSRSPGGLPQQPPTTQWDNIIKFLDSLMSQLRRNHVPSFFIRKLITQVFSFINISLFNSLLLRRECCTFSNGEYVKCGLAELEKWIVNSKEEYAGTSWHELNYIRQAVGFLVLNQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNGVVAEMREILNKDNQNLTSNSFLLDDDLSIPFSTEDIDMAIPAIDPYDIELPASLSENPCAQFLIRR 900
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4740102 4749221 - Bma014793.1 Bma02g00335 77585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00335 900 ProSiteProfiles IQ motif profile. 141 170 IPR000048 GO:0005515
Bma02g00335 900 ProSiteProfiles Myosin motor domain profile. 1 115 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00335 900 ProSiteProfiles IQ motif profile. 214 243 IPR000048 GO:0005515
Bma02g00335 900 CDD MyosinXI_CBD 499 868 IPR037975 GO:0007015
Bma02g00335 900 Coils Coil 250 294 - -
Bma02g00335 900 ProSiteProfiles IQ motif profile. 237 266 IPR000048 GO:0005515
Bma02g00335 900 SMART DIL_2 720 827 IPR002710 -
Bma02g00335 900 Coils Coil 306 326 - -
Bma02g00335 900 ProSiteProfiles IQ motif profile. 189 218 IPR000048 GO:0005515
Bma02g00335 900 ProSiteProfiles Dilute domain profile. 548 845 IPR002710 -
Bma02g00335 900 PANTHER PROTEIN OPAQUE1-LIKE 1 898 - -
Bma02g00335 900 PANTHER MYOSIN 1 898 - -
Bma02g00335 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 269 IPR027417 -
Bma02g00335 900 SMART iq_5 117 139 IPR000048 GO:0005515
Bma02g00335 900 SMART iq_5 140 162 IPR000048 GO:0005515
Bma02g00335 900 SMART iq_5 188 210 IPR000048 GO:0005515
Bma02g00335 900 SMART iq_5 213 235 IPR000048 GO:0005515
Bma02g00335 900 SMART iq_5 165 187 IPR000048 GO:0005515
Bma02g00335 900 Pfam DIL domain 721 824 IPR002710 -
Bma02g00335 900 Pfam IQ calmodulin-binding motif 145 159 IPR000048 GO:0005515
Bma02g00335 900 Pfam IQ calmodulin-binding motif 215 235 IPR000048 GO:0005515
Bma02g00335 900 Pfam IQ calmodulin-binding motif 192 209 IPR000048 GO:0005515
Bma02g00335 900 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 164 IPR027417 -
Bma02g00335 900 Coils Coil 334 434 - -
Bma02g00335 900 Pfam Myosin head (motor domain) 1 103 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bma02g00335 900 Gene3D - 51 116 - -
Bma02g00335 900 Gene3D Kinesin motor domain 8 50 IPR036961 -
Bma02g00335 900 Gene3D - 215 265 - -
Bma02g00335 900 Gene3D - 117 167 - -
Bma02g00335 900 Gene3D - 168 214 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00335 Bma-Chr2:4740102 Bma07g00554 Bma-Chr7:7539438 0 dispersed
Bma01g00910 Bma-Chr1:8809128 Bma02g00335 Bma-Chr2:4740102 0 wgd
Bma02g00335 Bma-Chr2:4740102 Bma02g00549 Bma-Chr2:11098431 3.72E-109 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00335 K10357 - zju:107420053 1408.28