Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00345 ATGGAGGAGACGTCTACCGTGGTTGCAGTGCCATTTAGAGCGGGTAATCAAGTATTTGATAGTCCAAATATAGCAATCCAGATGGATATCACGAGGCTTAAGCTGGTGGCGAATACAGCCAGATTATTATTTGAGTCTTTAACTGAGGCCTCCTCTGAACTGGTGGAAAGAATTGTTGAGGATTGTAACGGTAGTGATTTGGAGAATGAAGTGATTATGACGATAGTTGAGGAGGACGACAGAAGAGTATTTCCTTTACCAGATACTAGATCTCAAAACACAACCAACTGGGTGGCTTCTGGGGAGGTGGGGGCGACCCAAGAAAGCGAGGAAGATGATTACTTGTCAATGGAGGGTGATCACAATCTTGATAGCTCTTTTTCTCTTTCAGTAGTTAGTGAAAGTAGTAGCATATGTGGAGACGATTTCTTGGATTTTCAGACATCTTATGATATTGAAAGAACTAGTTCTGCACACATAGAGAAGCAGACTTGCAATGCTGATATTCTAGCCAAAGCCACCAGTCTGGGGCACTCAATTATCGGGACGGAGATGGAAAATGATCCTCTCGTTGTGGCAGTGGGCCTCGAGGAGAACATCCAAAATGGTTTTGAACCTAATGCATCTAACATTGTTCTTCAATTACCTCTTGTTGAAAAACGAACTCGTCGTAGTGTTTTTGAAGTGAATTACGTTCCACTTTGGGGGTTTACATCATTGTGTGGAAGAAGATCTGAAATGGAAGACGCCTATGCCTCTGTACCTCATTTTTTGGAAATTCCTATTCAGATGCTTACTGACGACTGGATGATCAACGGTGCAAAAAGGGAGATATCTAGTCAAACTATTCATTTTTTTGGAGTATATGATGGCCATGGTGGTTTCCAGGTTGCAAACTACTGTCGTGAGCGTCTCCATACGGCTTTAGCAGAGGAGATTGAACTTGTCAAGGAAGGTTTATTAGCTGGGAGAATTGGTGAAAATTGCCAAGAACAGTGGAAAAGAGTGTTCATCAATTGTTTTCTCAAGGTCGATGCCGAAGTTGGAGGAAAATCTAGAACTGAGCCTGTTGCCTCAGAAATGGTCGGTTCAACTGCCGTCGCTGCAATAGTCTGTGCATCTCATATCATAGTAGCCAACTGTGGCGATTCAAGGGCCGTTCTTTGTCGGGGAAAAGAGCCAGTGGCATTGTCAGTGGATCATAAGCCCAACAGAGAAGATGAATATGCAAGGATCGAGGCTGCTGGCGGAAAGGTCTTTCAATGGTGTGGGCATCGTGTCTCTGGAGTTCTTGCAATGTCAAGATCTATCGGAGATAGATACTTGAAACCGTGGATCATTCCAGAGCCGGAAGTGACTTTTCTCCCTCGAGCCAGAGACGACGAATGTCTAATCCTTGCCAGCGATGGTTTATGGGACGTGATGTCCAATGAAGAGGCGTGCGACTTGGCTCGAAGACGAATCCTCCTCTGGCACAAGAAGAACGCCCATAATCTAACCCAAGAACGGAGCGAAGGAGTCGACCCTGCGGCTCAAGCCGCAGCCGAGTATCTATCGAGCCGAGCTCTTCAAAAGGGTAGCAAGGACAACATCACTGTAATTGTGATGGACTTGAAATCTCAGTGGAAGTTCAAGGCAAAGACATGA 1647 45.11 MEETSTVVAVPFRAGNQVFDSPNIAIQMDITRLKLVANTARLLFESLTEASSELVERIVEDCNGSDLENEVIMTIVEEDDRRVFPLPDTRSQNTTNWVASGEVGATQESEEDDYLSMEGDHNLDSSFSLSVVSESSSICGDDFLDFQTSYDIERTSSAHIEKQTCNADILAKATSLGHSIIGTEMENDPLVVAVGLEENIQNGFEPNASNIVLQLPLVEKRTRRSVFEVNYVPLWGFTSLCGRRSEMEDAYASVPHFLEIPIQMLTDDWMINGAKREISSQTIHFFGVYDGHGGFQVANYCRERLHTALAEEIELVKEGLLAGRIGENCQEQWKRVFINCFLKVDAEVGGKSRTEPVASEMVGSTAVAAIVCASHIIVANCGDSRAVLCRGKEPVALSVDHKPNREDEYARIEAAGGKVFQWCGHRVSGVLAMSRSIGDRYLKPWIIPEPEVTFLPRARDDECLILASDGLWDVMSNEEACDLARRRILLWHKKNAHNLTQERSEGVDPAAQAAAEYLSSRALQKGSKDNITVIVMDLKSQWKFKAKT 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5551512 5553906 - Bma014815.1 Bma02g00345 77595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00345 548 ProSitePatterns PPM-type phosphatase domain signature. 285 293 IPR000222 GO:0043169
Bma02g00345 548 ProSiteProfiles PPM-type phosphatase domain profile. 234 538 IPR001932 -
Bma02g00345 548 SMART PP2C_4 224 536 IPR001932 -
Bma02g00345 548 CDD PP2Cc 236 538 IPR001932 -
Bma02g00345 548 PANTHER ALPHABET, ISOFORM E-RELATED 120 548 - -
Bma02g00345 548 SUPERFAMILY PP2C-like 222 539 IPR036457 -
Bma02g00345 548 Pfam Protein phosphatase 2C 238 531 IPR001932 -
Bma02g00345 548 Gene3D - 221 548 IPR036457 -
Bma02g00345 548 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 120 548 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00345 Bma-Chr2:5551512 Bma15g00328 Bma-Chr15:3199290 1.36E-153 dispersed
Bma07g00517 Bma-Chr7:6448042 Bma02g00345 Bma-Chr2:5551512 1.54E-90 transposed
Bma01g00916 Bma-Chr1:8903840 Bma02g00345 Bma-Chr2:5551512 0 wgd
Bma02g00345 Bma-Chr2:5551512 Bma02g00536 Bma-Chr2:10564858 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00345 K14497 - zju:107420119 702.59