Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00346 CAGAAAGATCTAGAGGCCGAAATGAAGAGATTAAAGCTAGAACTTAAGCAAACTATGGATATGTATAGCTCGGCTTGCAAAGAAGCAATCTCAGCTAAAAATAAGGCTAAAGAACTTAATCTGTGGAAGGTAGAGGAGGCTCGAAAACTTGAGGAAGTGAAACTCGCAGAAGAGGCAGCTCTTGCCATTGCAGAGATGGAGAAGGCCAAGTGCAGAGTGGCAATCGAAGCGGCCGAGGCGGCACAGAGGATGGCTGAGAAGGAAGTGCTGAAAAGAAAACAGGCAGAGATGAAGGCGAGAAAAGAGGCCGAAGAGAAGAATAGAGCATTGACTGCTTTGGCTCACAACGACGTTCGGTACAGAAAATACACCATCGATGAGATCGAAACCGCCACCGAGAAATTCTCCGATGAACACAAAATCGGTGAAGGTGGGTATGGTCCCGTTTATAAAGGCAAGCTTGACCACACGCCTGTTGCGATCAAAGTTTTACGACCGGATGCAGCTCAGGGAAGAAAGCAATTTCAGCAAGAGGTTGAAGTACTGAGCTGCATAAGGCATCCTCACATGGTGCTTCTCCTCGGCGCTTGTCCGGAATACGGGTGTTTAGTGTACGAGTTCATGAACCACGGGAGCTTGGAAGATCGACTTTTTCGAAGAGGAAACACTCCGACGATATCGTGGAGAAACCGGTTCAAAATATCGGCAGAGATCGCCACCGCTCTCTTGTTTCTCCACCAATCAAAACCCGAGCCTCTCGTCCACAGAGACCTCAAGCCGGCCAACATTCTCTTGGATCAAAACTACGTGAGTAAGATCAGCGATGTCGGATTAGCGAGACTGGTCCCCCCATCCATAGCTGATCAAGTGACTCAATATCACATGACTTCAGCGGCCGGGACCTTCTGTTACATCGATCCGGAGTATCAACAAACCGGAAAGTTAACGACGAAGTCGGACGTGTACTCGTTCGGTATAATGCTTCTCCAAATCATCACTGCTAGGCCACCGATGGGTCTAGCCCACCATGTTCAGAGGGCGATCGAGAAGGACAGATTTGAGGAGATGCTAGACCCTGCAGTCCCAGACTGGCCTGTGCAAGAGGCTCTATCATTTGCTAAATTGGCTTTGAAGTGTGCTGAGCTTAGGAAAAAGGACAGGCCGGATCTCGGCAGCGACATTGTCCCGGAGCTTAACCGATTGAGAGATCTCGGAAAAAGTTCCGATCAATCCGAGTTTCTCAGACACGGCAATGGAGAACGGAGTCACAGTCCGATTCCTCGCCCTCTTCCTGCAAATTAA 1302 49.16 QKDLEAEMKRLKLELKQTMDMYSSACKEAISAKNKAKELNLWKVEEARKLEEVKLAEEAALAIAEMEKAKCRVAIEAAEAAQRMAEKEVLKRKQAEMKARKEAEEKNRALTALAHNDVRYRKYTIDEIETATEKFSDEHKIGEGGYGPVYKGKLDHTPVAIKVLRPDAAQGRKQFQQEVEVLSCIRHPHMVLLLGACPEYGCLVYEFMNHGSLEDRLFRRGNTPTISWRNRFKISAEIATALLFLHQSKPEPLVHRDLKPANILLDQNYVSKISDVGLARLVPPSIADQVTQYHMTSAAGTFCYIDPEYQQTGKLTTKSDVYSFGIMLLQIITARPPMGLAHHVQRAIEKDRFEEMLDPAVPDWPVQEALSFAKLALKCAELRKKDRPDLGSDIVPELNRLRDLGKSSDQSEFLRHGNGERSHSPIPRPLPAN 433
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5577973 5579488 + Bma014816.1 Bma02g00346 77596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00346 433 MobiDBLite consensus disorder prediction 401 422 - -
Bma02g00346 433 Pfam Protein tyrosine and serine/threonine kinase 138 390 IPR001245 GO:0004672|GO:0006468
Bma02g00346 433 Coils Coil 78 113 - -
Bma02g00346 433 Gene3D Transferase(Phosphotransferase) domain 1 208 418 - -
Bma02g00346 433 Coils Coil 1 21 - -
Bma02g00346 433 SMART serkin_6 135 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00346 433 Gene3D Phosphorylase Kinase; domain 1 112 207 - -
Bma02g00346 433 PANTHER OS02G0152300 PROTEIN 2 416 - -
Bma02g00346 433 PANTHER KINASE WITH ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE DOMAIN-CONTAINING PROTEIN 2 416 - -
Bma02g00346 433 MobiDBLite consensus disorder prediction 401 433 - -
Bma02g00346 433 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Bma02g00346 433 SUPERFAMILY Protein kinase-like (PK-like) 118 390 IPR011009 -
Bma02g00346 433 CDD STKc_IRAK 141 401 - -
Bma02g00346 433 ProSiteProfiles Protein kinase domain profile. 135 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00346 Bma-Chr2:5577973 Bma07g00657 Bma-Chr7:11006423 0 dispersed
Bma07g00103 Bma-Chr7:1762999 Bma02g00346 Bma-Chr2:5577973 7.81E-83 transposed
Bma10g01235 Bma-Chr10:43916952 Bma02g00346 Bma-Chr2:5577973 7.97E-68 transposed
Bma02g00346 Bma-Chr2:5577973 Bma02g00535 Bma-Chr2:10539998 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66341 PF07714 PK_Tyr_Ser-Thr 1.10E-42 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00346 - - csv:101203326 652.129