Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00365 CTTCCCTTCTCCGCCATTGCCATGGAAGCTTCTCTCTCCTCCTTCCTCGTCTTCTTCTTCTCCGCCGTCTCTCTCTTCATTCAAGCATTTGCCGACCCTCGGGCCGACCTCGTCGCCCGGTCCTGCAGGCACAATCACGCATTGCACTCAACGAGTTACAGTAAATGCTATTTCAGGATGGTGAGGGATTTGGAGGAAGATTTGGAGCATGACAAGTTTGCTCTTGGGGTAGCGGGGGAGCCACCTCAGAGACTCTATTTTTATGCGCAATGCAATGAAGATCTTTCCTCTGAAGATTGTAGACAGTGCTTTGATGTTATAAAGAAGATGTTGCCGAGCTGCTTTCCGGCGACCGGAGGCCGAGTTTATTTTGATGGCTGCTTTATCAGAGCTGAGAACTACAGCTTCTTTCAAGAAACTACCACGTCTGATGATTTATGGAGATGCAGCGACAGCATAGACGAGAGGCCACAATTCAAGTTAACGGTATCAAAAGCGATCCACGAGGTGATAAGAAAAGCAGTTGAATTAGGAGGATTTGCCTTACAAGAAGAGGAAATGGTAGACGTATCAGTATATGCAATGGCCAACTGTTGGAAAACGTTGGACCGTGATAGATGTGCATCCTGTCTTGCAAGGGCAGCTCAAGTTTCAAACTCTTGCCTTCCGTCGACCGAGGGTCGTGCTCTCAATTCTGGCTGTGTTTTGCGTTACTCTGATTACAAATTTGCTAACGAAATGAACGATGAATCAACCAAAGAATCCTTTGTTTTATATGTATCATATTTTCTGGCTGCGACTGCCATCTGCTCTTCAATGGTGATAATGGGATTCTTCGTGGGAAAGATCGTCTACAAAAGAAAGAATTGCCGCAGAAAAAGAGATGGTAACTTTCAAAAGCGAGAGCATAACATTTTTCTCGATGGAGAGGATATGGATTACTCAGTATTACTCGAGAACTTGCATTTCAAATATGAAATATTAGAGAAAGCAACCGAAGGGTTTAGTGAGGGTAACAAGCTTGGTCAAGGAGGATATGGTGAAGTTTTTAAGGGAACATTGCCAGATGGTAGGGAGATTGCAATAAAACGATTATTTATGAATGGGAAGGGTCGAGCAGAGGTTGTCTACAACGAAATTGATGTCATTAGCAGAGCTCAACACAAGAACTTGCTTCGTTTTCTTGGATGTTGCCTCACCGTCAAGAACAGCTTTCTTGTTTATGAGTTTCTCGCAAACAGAAGTCTCGACCTCATCCTATTTGACCCAAAGAAGAAGAAAGAGCTTGATTGGAGAAAAAGGCTTGCAATTATAGTCGGTGCAGCAGAAGGATTGGCCTACCTACACAAAGATTGTCCGGTTCGAATCCTTCATCGAGATATCAAAGCCAGCAACATTCTTTTAGACGCAAAGTTCAAGCCTAAGATTGCAGATTTTGGGTTGGCAAGATTTTACTCTTGCGAAAATAGTATTATTGGTACTTCCATAGAAGGAACATTAGGGTATATGGCTCCTGAATACCTCACTCGAGGGCACTTAACCGAAAAAGTCGATGTTTATAGCTTTGGAGTTTTGGTGCTTGAAATAGTGAGCGGAGAGCGAAACAACAAGTCTCTAACTTCTGAATCCTTCGAATCTGTGGTTGTTCGAGCTTGGACACACTTCCAATCGAACAAAGTAGCGGAAATGATTGACAAAAGCATCGAGATGGAAGAAATCGAAAAGATTTCAAGAGTGGTTCAAGTGGGTCTGTTATGTACACAAGAGATGCCGTCTTCACGACCGACAATGGAGAAAGTAGTCCAAATGCTGACTCAGACCGAAAGCGGGTTGTCACGGCCTTCGAAGCCGCCGTTTATGGACGAGGGTATGGAGTTTTCTTCTTGTTTAGATTGTGATAGAAGACCACACTCATTTGTCAGACTTTTAGAATCCATAGAGCCTGCAAGCAATTGTACATGA 1962 43.68 LPFSAIAMEASLSSFLVFFFSAVSLFIQAFADPRADLVARSCRHNHALHSTSYSKCYFRMVRDLEEDLEHDKFALGVAGEPPQRLYFYAQCNEDLSSEDCRQCFDVIKKMLPSCFPATGGRVYFDGCFIRAENYSFFQETTTSDDLWRCSDSIDERPQFKLTVSKAIHEVIRKAVELGGFALQEEEMVDVSVYAMANCWKTLDRDRCASCLARAAQVSNSCLPSTEGRALNSGCVLRYSDYKFANEMNDESTKESFVLYVSYFLAATAICSSMVIMGFFVGKIVYKRKNCRRKRDGNFQKREHNIFLDGEDMDYSVLLENLHFKYEILEKATEGFSEGNKLGQGGYGEVFKGTLPDGREIAIKRLFMNGKGRAEVVYNEIDVISRAQHKNLLRFLGCCLTVKNSFLVYEFLANRSLDLILFDPKKKKELDWRKRLAIIVGAAEGLAYLHKDCPVRILHRDIKASNILLDAKFKPKIADFGLARFYSCENSIIGTSIEGTLGYMAPEYLTRGHLTEKVDVYSFGVLVLEIVSGERNNKSLTSESFESVVVRAWTHFQSNKVAEMIDKSIEMEEIEKISRVVQVGLLCTQEMPSSRPTMEKVVQMLTQTESGLSRPSKPPFMDEGMEFSSCLDCDRRPHSFVRLLESIEPASNCT 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5827410 5830229 + Bma014835.1 Bma02g00365 77615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00365 653 SMART serkin_6 335 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00365 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 16 635 - -
Bma02g00365 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Bma02g00365 653 Gene3D Phosphorylase Kinase; domain 1 303 410 - -
Bma02g00365 653 Gene3D Transferase(Phosphotransferase) domain 1 411 615 - -
Bma02g00365 653 ProSiteProfiles Gnk2-homologous domain profile. 35 136 IPR002902 -
Bma02g00365 653 Pfam Salt stress response/antifungal 158 241 IPR002902 -
Bma02g00365 653 Pfam Salt stress response/antifungal 50 134 IPR002902 -
Bma02g00365 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 43-RELATED 16 635 - -
Bma02g00365 653 SUPERFAMILY Protein kinase-like (PK-like) 316 605 IPR011009 -
Bma02g00365 653 ProSiteProfiles Protein kinase domain profile. 335 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00365 653 Gene3D - 34 136 IPR038408 -
Bma02g00365 653 Gene3D - 147 243 IPR038408 -
Bma02g00365 653 Pfam Protein kinase domain 336 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00365 653 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Bma02g00365 653 ProSiteProfiles Gnk2-homologous domain profile. 141 243 IPR002902 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00967 Bma02g00365 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00365 Bma-Chr2:5827410 Bma11g00350 Bma-Chr11:3659451 9.89E-99 dispersed
Bma01g00042 Bma-Chr1:473093 Bma02g00365 Bma-Chr2:5827410 0 transposed
Bma01g00967 Bma-Chr1:9536752 Bma02g00365 Bma-Chr2:5827410 3.89E-150 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66342 PF00069 Pkinase 7.40E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00365 - - zju:107431371 691.804