Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00370 ATGGAGTCGCTCGTCGAAGGCGTGAGTTCTTTCCCAAAAGGCGAGAATTCGATGGCTTTAAGACATCTGAAACAATCAAAATCTGAAGCAGCTTCTTCAACATCTAACATGGCTTCTCACAGTAATGCCAAGACAACTAGGCGAGTAAATGGTTCTGCAGTTAGTCGAAAGCATCATCATAATGTGGCTCTTGAAAATTTACAGCTCGAAGAATTCTCAAGTATGGCTAAACACACGACAAAGGGAAAATCTGAATGTGTTTGTTCGAACGAAGCTTCTTCCCAAAAGACGATTTCTATGGCTGGAGCAAAACACGATCATTACAATCTTACTTTCGGTCGATCTAAAGATGGAGTGATCTCTGTTCCGAGCCCTCAAAATAGTTTATATTCTGCAACATTATACGCGGAAGCCAAACAGAGTTTCTCCAATACAGAAATCAGCGAAGGAACGTGTAGTTGTTTCACCCCTCGCTTTTTGTCGAGCAGGTCTAAGAAACCGAAGAAGGCGAAGCAAAAGAACGAAATATCTCATCAAGTGAGTCCTCTCCCCGAGCTCATTGCCGAACCCACCAGTGCTCGGTCCATGTCCTTTGTCGGCACCCACGAGTACTTGGCTCCCGAAATAATCAAAGGGGAAGGCCATGGAAGTGCTGTCGATTGGTGGACTTTCGGGATTTTTCTCTATGAGCTTCTCTTCGGTGAAACTCCGTTCAAAGGGCCAGGAAATCGAGCCACTCTTTTTAATGTCGTCGGGCAGCCGTTGAGATTTCCCGAGTCTCCTACGGTGAGTTTTGCGGCGAGGGACTTGATCAGAGGCTTGCTCGTTAAAGAGCCACAGCATCGTCTTGCTCATAGACGGGGGGCGACTGAGATTAAACAGCATCCTTTTTTCCAGAGCGTTAATTGGGCTCTGATTCGGTGTGAAACTCCGCCGGAAGTGCCGAGGACGGAGATTCCAGAAGTACCCATTGCCGAGAAGGTGCCTGGATTCGACGTAAAGGCTTCAGGTAATTATTTAGATATCGATTTCTTTTGA 1038 46.34 MESLVEGVSSFPKGENSMALRHLKQSKSEAASSTSNMASHSNAKTTRRVNGSAVSRKHHHNVALENLQLEEFSSMAKHTTKGKSECVCSNEASSQKTISMAGAKHDHYNLTFGRSKDGVISVPSPQNSLYSATLYAEAKQSFSNTEISEGTCSCFTPRFLSSRSKKPKKAKQKNEISHQVSPLPELIAEPTSARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGETPFKGPGNRATLFNVVGQPLRFPESPTVSFAARDLIRGLLVKEPQHRLAHRRGATEIKQHPFFQSVNWALIRCETPPEVPRTEIPEVPIAEKVPGFDVKASGNYLDIDFF 345
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5889181 5891184 + Bma014841.2 Bma02g00370 77620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00370 345 MobiDBLite consensus disorder prediction 1 56 - -
Bma02g00370 345 PANTHER FLIPPASE KINASE 1-RELATED 43 151 - -
Bma02g00370 345 SMART serkin_6 44 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00370 345 Gene3D Transferase(Phosphotransferase) domain 1 193 316 - -
Bma02g00370 345 MobiDBLite consensus disorder prediction 21 50 - -
Bma02g00370 345 Pfam Protein kinase domain 195 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00370 345 PANTHER FLIPPASE KINASE 1-RELATED 153 345 - -
Bma02g00370 345 ProSiteProfiles Protein kinase domain profile. 1 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00370 345 SUPERFAMILY Protein kinase-like (PK-like) 193 322 IPR011009 -
Bma02g00370 345 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 43 151 - -
Bma02g00370 345 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 153 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00370 Bma-Chr2:5889181 Bma14g00904 Bma-Chr14:10219310 2.54E-102 dispersed
Bma01g00962 Bma-Chr1:9499001 Bma02g00370 Bma-Chr2:5889181 2.58E-28 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66343 PF00069 Pkinase 9.00E-21 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00370 K08286 - nnu:104593092 340.502