Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00402 ATGACTAAGTGTAGTTCCTTTATGATGATCTGGGTAGCTGTAATTTTTTTCTACTCTGCTTCTTCTCTGGGAATTGCACAGGACGACGTTAGGTGTCTACAAGGAGTTAAAAGCTCGCTAAGCGATCCACAACGACGGCTACGCTCATGGAATTTCGATGCCCCGTACATGGGTTTTATTTGCACTTTTGTTGGCGTTTCGTGCTGGAACAACATCGAGAATCGCATAATCGACTTGCAGCTCAGAAACATGGAACTTTCTGGTCCGATTCCTGAATCTTTGCAGTACTGTGGAAGTCTTCAAGTCTTGGATCTTTCTCATAATAACCTTTCTGGTTCGATTCCTTTTGAGCTATGTGATTGGTTGCCCTTTTTGGTTAGATTAGATTTGTCCAATAATCAATTTTCAGGTCCTATTCCCGTTGACCTTGCAAAATGTTTGTATCTGAATCATCTGATCCTTTCGAACAATCAGTTTTTGGGTAGTGTGCCTCATGAATTTTCTACTTTGGATCGGCTTAAGAAGTTTTCTGTTAGAAATAACCATCTTACAGGTGTAATCCCTTCTTTTTTTGATGGATTTGATGCGTTTGATTTTGATGGAAATAGTGGCCTGTGTGGAGGGCCTCTTGAATCAAAGTGTAGTGTGGTTAAGAAGAAAAATGTTATTGTCATAGTTGTTGCTGGGCTCTTTGGTTCCTCGTCACTGTCTTTGGGTGTTGGGTTGTGGTTTTGTTTGAGGTTCAGAAGAAGAAACAAAAGGATACTTGGGAAAGATTGTGTCTGGCGTCGGCCTCCAATTTTAAAGGCTCTTTAG 816 40.93 MTKCSSFMMIWVAVIFFYSASSLGIAQDDVRCLQGVKSSLSDPQRRLRSWNFDAPYMGFICTFVGVSCWNNIENRIIDLQLRNMELSGPIPESLQYCGSLQVLDLSHNNLSGSIPFELCDWLPFLVRLDLSNNQFSGPIPVDLAKCLYLNHLILSNNQFLGSVPHEFSTLDRLKKFSVRNNHLTGVIPSFFDGFDAFDFDGNSGLCGGPLESKCSVVKKKNVIVIVVAGLFGSSSLSLGVGLWFCLRFRRRNKRILGKDCVWRRPPILKAL 271
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6208031 6210449 + Bma014878.1 Bma02g00402 77652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00402 271 SUPERFAMILY L domain-like 28 202 - -
Bma02g00402 271 Pfam Leucine rich repeat N-terminal domain 26 69 IPR013210 -
Bma02g00402 271 ProSiteProfiles Leucine-rich repeat profile. 99 120 IPR001611 GO:0005515
Bma02g00402 271 Pfam Leucine Rich repeats (2 copies) 99 139 IPR025875 -
Bma02g00402 271 Gene3D Ribonuclease Inhibitor 26 216 IPR032675 -
Bma02g00402 271 PANTHER OS07G0107800 PROTEIN-RELATED 7 255 - -
Bma02g00402 271 PANTHER - 7 255 - -
Bma02g00402 271 PRINTS Leucine-rich repeat signature 122 135 - -
Bma02g00402 271 PRINTS Leucine-rich repeat signature 100 113 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00402 Bma-Chr2:6208031 Bma14g01515 Bma-Chr14:30635792 2.33E-88 dispersed
Bma02g00402 Bma-Chr2:6208031 Bma06g01049 Bma-Chr6:47314103 2.26E-23 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00402 - - cit:102611300 290.426