Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00415 ATGGTGGCGGATAAGGGGAAGAAATCCAAGGTCGTTGAGAGAGTTGAGGATGAAGACTCTGACCACATTGACGGCGAGCTTGTTCTCTCCATTGAAAAGTTGCAGGAGGTCCAAGATGAGCTTGAAAAGGTTAATGAGGAAGCCAGTGACAAAGTTTTGGAAGTAGAGCAGAAATATAATGAGATACGCAGGCCTGTTTATGTCAAACGGAATGCCATTATCAAGACTATACCAGATTTCTGGTTAACTGCTTTCTTGAGTCATCCAGCACTTTGTGATCTTTTGACTGAGGAAGACCAGAAGATCTTTAAGTATTTAGATTCTCTAGATGTGGAAGATTTTAAAGATGTAAAGCTGGGATACTCCATCACCTTTAACTTTAAAGAGAACCCGTATTTTGAAGATACAAAGCTATCAAAAGCCTTCACATTCTTCGACGAGGGTACAACTAAGATCACCGGTACATTAATCAAGTGGAACGAGGGAATGGGTGCTTCTAATGGAGTAAATCATGCAAAGAAGGGAACCAAACGTATGCTAACTGAGGAGAGCTTCTTTAGCTGGTTTGGTGAAACTGAACAGAAAGATATTGCAGAGCTTCATGATGAGAGCCTGATTCTCCTGCTCGTCGTCGCCATTGCTGCCTTTAGCTCCGGCCTGCTGATTCAGAGATGTATGGACAAAATTCTGCTCCTCTGCTTCGTCTCATGCACCATCGGCTATGCGTCAATGGCCGTCATGGGATACACGATGTTCGGGTCCGATATTCGATCGCAAATAACCTTAAATCTCCCAAAAGAAAAGCTCAGCTCGAAAGTGGAAATCTACACGGCCTTAGCCAATCCGATCTGCAAATACGCGTTGATGGTTAAGCCAATTGTCGTTTCAATGAAGAGTTGGTTCCCATGCTATAACACTAAACGGCCATTCTTCTTGACACTCTTTTTGTGCATTACCGCTTCAATCATACTCCCTTGCTTATGCTACTTGAAGATTTCAGGCACTTACCGGAGTTTTTCGTTCGAAACCGCCGTGATAGTTAGCATGATCTTGACGGGTGGTGCAATTGCTGTTATCGGTACATATACTTCGCTTGCTCAAATCATAAAACGACTGCAGTGA 1122 43.32 MVADKGKKSKVVERVEDEDSDHIDGELVLSIEKLQEVQDELEKVNEEASDKVLEVEQKYNEIRRPVYVKRNAIIKTIPDFWLTAFLSHPALCDLLTEEDQKIFKYLDSLDVEDFKDVKLGYSITFNFKENPYFEDTKLSKAFTFFDEGTTKITGTLIKWNEGMGASNGVNHAKKGTKRMLTEESFFSWFGETEQKDIAELHDESLILLLVVAIAAFSSGLLIQRCMDKILLLCFVSCTIGYASMAVMGYTMFGSDIRSQITLNLPKEKLSSKVEIYTALANPICKYALMVKPIVVSMKSWFPCYNTKRPFFLTLFLCITASIILPCLCYLKISGTYRSFSFETAVIVSMILTGGAIAVIGTYTSLAQIIKRLQ 373
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6335925 6340380 - Bma014896.3 Bma02g00415 77665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00415 373 PANTHER NUCLEOSOME ASSEMBLY PROTEIN (NAP)-RELATED 2 202 - -
Bma02g00415 373 SUPERFAMILY NAP-like 7 197 IPR037231 -
Bma02g00415 373 Coils Coil 27 58 - -
Bma02g00415 373 Gene3D Nucleosome assembly protein 78 216 - -
Bma02g00415 373 PANTHER TESTIS-SPECIFIC Y-ENCODED PROTEIN 2 202 IPR002164 GO:0005634|GO:0006334
Bma02g00415 373 Pfam Nucleosome assembly protein (NAP) 75 197 IPR002164 GO:0005634|GO:0006334
Bma02g00415 373 Pfam Transmembrane amino acid transporter protein 226 325 IPR013057 -
Bma02g00415 373 Gene3D - 1 77 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g01033 Bma02g00415 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00101 Bma-Chr1:1065696 Bma02g00415 Bma-Chr2:6335925 4.29E-33 dispersed
Bma01g00240 Bma-Chr1:2096268 Bma02g00415 Bma-Chr2:6335925 2.14E-12 dispersed
Bma02g00415 Bma-Chr2:6335925 Bma03g00835 Bma-Chr3:7917799 1.22E-24 dispersed
Bma01g01033 Bma-Chr1:10750765 Bma02g00415 Bma-Chr2:6335925 1.07E-85 wgd
Bma02g00415 Bma-Chr2:6335925 Bma08g00217 Bma-Chr8:2697955 2.29E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00415 K11290 - zju:107415547 356.295