Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00436 ATGGCGACTCCGAGGCCGCAGAGATCACCGGCGGAGGTGGAGGATATAATTATTAGGAAAATTTTTCTCGTGTCTTTTACGGATATTGGCAGTTCCGATTCCCGAATCGTCTACCTTGAGCAGACTGCAGCTGAGGTCTTGAGCGAGGGGAAAGATTTGAGGCTTGTTGAGCTTCTCTCTTCTGCCAGTTCAGGGATGTTTGTCAATCTCAGTGTTGTTATGCTTAGGCTATGTGAGCCATTTGTGGATGTAAATATGACAAAACGGGATAAACTTGATCCAAATTATGTATTCTATGGTAACCGTTTAGAATTAAGAGGGTTGACTGCTCTACATGCATCGCTGGAAGAAGTTTCTGAGTGGATTAATGATGATAATAATGGGAAAACTGATAGTTCTGGACAATATAGTGATGGTGAAAATCGATTGCTTCAATCTAAAGAAGCCTCTGTTTCTGGTAATGAAGTGTCTGGAGCATATAAGGGAAAGCAAAAAATTAATGAAAAAAGAAAGTTCCCGTTCATATGTGAATGCTTCTTTATGACTGCAAGGGTACTCAACTTAGGCTTGTTAAAAGCATTGTCAGACTTCAAACATTTGGTGCAGGATATATCCAGGTCTGAAGATATGCTTTCTACTCTTAAAGACAGGCGGGGTTCAGCCACTTCTCAGCAGCTTGAATTGGAAATAGCTCGTCTTGAGAAGGAAATTGAGGTTTATTCGCAGGAAAAGCTTTGCTATGAAGCACAGATACTAAGGGATGGAAGTCTGATTCAGCAGGCTCTTTCTTTCTACCGACTAATGGTTACTTGGTTAGTTGGCTTGGTCGGTGGATTCAAAATGCCCCTTTCGCCAATTGCTCCAATGGAATTTGCTTGCATGCCTGAACATTTTGTGGAAGATGCAATGGAATTGCTTATATTCGCATCTAGGATTCCTAAAGCTTTGGATGGCGCCTTGTTGGATGAATTTATGAATTTCATCATCATGTTCATGGCAAGTCCGGACTACATCCGAAATCCTTATTTGAGAGCAAAGATGGTTGAAGTCCTTAACTGCTGGATACCTCGTGGAAGTGGCACGTCTGCTACAAATACTTTATTTGATGGACATCAACTGTCTCTTGAGTATCTCGTGAGAAATCTTTTGAAGCTTTATGTTGACATTGAGTTCACTGGTTCTCACACACAGTTCTATGACAAGTTCAACATCCGCCACAATATTGCCGAACTTCTTGAATACCTCTGGCAGGTTCCTAGTCATCGTAGTGCTTGGAGACAGATTGCTAAGGAGGAGGAAAAGGGTGTTTATTTGAATTTCCTAAACTTCCTAATCAATGATAGCATATATCTTCTCGATGAAAGCCTTAATAAAATTCTTGAAATCAAAGAGCTGGAAGCCGAGATGTCAAACACTGTGGAATGGGAACAACGACCTGCTCAAGAAAGACTAGAGAGAACTCGGTTGTTCCAAAGCCAAGAAAATATTATTCGAATTGATATGAAATTGGCAAATGAGGATGTTGGTTTACTTTCATTTACCTCAGAGCAGATTACAGCCCCTTTTCTACTTCCTGAGATGATTGAACGAGTGGCAAGCATGCTCAATTATTTTCTCCTACAACTTGTTGGTCCTCAACATAGATCTCTTAGTCTGAAGGACCCAGAGAAGTATGAATTCCGTCCAAAGCAGCTGCTTAAGCAGATTGTGCAAATATATGTCCATCTGGCAAGGGGTGATTCAAATAATGTTTTCCCTGCTGCAATCTCCAAGGATGGTCGATCTTATAACGAGCAATTGTTCACTGCTGCAGCAGTGGTCCTTCAAAGAATAGGAGAAGATATGAGGATCATTCGAGAGTTTATTGAGCTTGGTAACAAAGCTAAAATTGCAGCTTCTGAGGCTTTAGACGCTGAAGCTGCTCTTGGAGAAATACCTGATGAATACCTCGACCCAATTCAATATACTTTAATGAAGGATCCAGTGATCCTACCTTCTTCAAGGATCACAGTCGACCGGCCGGTCATTCAAAGGCACCTACTAAGTGATAGTACCGACCCTTTCAATCGTTCGCATCTTACGGCTGACATGCTCATACCGGATGTGGAATTGAAAGAGAAAATTGAGGAGTTCATTAGGTCCCAACAAATGAAGAAGCGACCAGAAGGGGTAATCGTGCAAAGCACCAAAGGATCAATACAAAATACGAGTAGCGACATGTTAATCGACTGA 2232 41.53 MATPRPQRSPAEVEDIIIRKIFLVSFTDIGSSDSRIVYLEQTAAEVLSEGKDLRLVELLSSASSGMFVNLSVVMLRLCEPFVDVNMTKRDKLDPNYVFYGNRLELRGLTALHASLEEVSEWINDDNNGKTDSSGQYSDGENRLLQSKEASVSGNEVSGAYKGKQKINEKRKFPFICECFFMTARVLNLGLLKALSDFKHLVQDISRSEDMLSTLKDRRGSATSQQLELEIARLEKEIEVYSQEKLCYEAQILRDGSLIQQALSFYRLMVTWLVGLVGGFKMPLSPIAPMEFACMPEHFVEDAMELLIFASRIPKALDGALLDEFMNFIIMFMASPDYIRNPYLRAKMVEVLNCWIPRGSGTSATNTLFDGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRSAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILEIKELEAEMSNTVEWEQRPAQERLERTRLFQSQENIIRIDMKLANEDVGLLSFTSEQITAPFLLPEMIERVASMLNYFLLQLVGPQHRSLSLKDPEKYEFRPKQLLKQIVQIYVHLARGDSNNVFPAAISKDGRSYNEQLFTAAAVVLQRIGEDMRIIREFIELGNKAKIAASEALDAEAALGEIPDEYLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTADMLIPDVELKEKIEEFIRSQQMKKRPEGVIVQSTKGSIQNTSSDMLID 743
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6531084 6537228 - Bma014918.1 Bma02g00436 77686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00436 743 CDD RING-Ubox_UBE4A 647 716 - -
Bma02g00436 743 Pfam Ubiquitin elongating factor core 60 628 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Bma02g00436 743 PANTHER - 56 720 - -
Bma02g00436 743 ProSiteProfiles U-box domain profile. 644 718 IPR003613 GO:0004842|GO:0016567
Bma02g00436 743 PANTHER UBIQUITINATION FACTOR E4 56 720 IPR045132 GO:0000151|GO:0030433|GO:0034450
Bma02g00436 743 Coils Coil 223 250 - -
Bma02g00436 743 SMART Ubox_2 648 711 IPR003613 GO:0004842|GO:0016567
Bma02g00436 743 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 644 723 IPR013083 -
Bma02g00436 743 SUPERFAMILY RING/U-box 637 716 - -
Bma02g00436 743 PANTHER UBIQUITINATION FACTOR E4 1 56 IPR045132 GO:0000151|GO:0030433|GO:0034450
Bma02g00436 743 Pfam U-box domain 645 716 IPR003613 GO:0004842|GO:0016567
Bma02g00436 743 PANTHER - 1 56 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00436 K10597 - tcc:18601598 1108.59