Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00437 ATGGGTTTGAAATTTTCTAAGCATGGGCATGGGAAGGTGGAAAACCTAACTCTGCAACATCACCTGATAAATTATCTTTCCGAAAGCTTTTATCTTCGCCACTTGGTATCCAAGCAACGAAGAAGAATGCTTGTTGCCGGTTTTGATCTTGACATGTCCTATATTACAGATCGTATATTGGCTATGTCTTTCCCTGCAGAACGCATGCGTGCTGTTTATCGTAATCCTCTTTGGCAGGTTAAGTCTGTTCTTGACATGAGACATCGAGATCATTATAAGGTTTATAACCTATGCATAGAAGAATCATACGATCCATCTCATTTCCATGGCCGTGTAGAGGCATTTCCTTTTGATGACAACCATGTCCCTCCTCTCCAAATGATTAAGCTTTTCTGCGAGAGTGTTCATTCGTGGCTATCATGCAACCAAAAGAATGTTGCCGTGATACACTGCATGGCAGGCAAAGGTCGAACGGGCATGATGGTATGTGCCTATCTTGTATACAGTGGCATGTCAGCGGAGGAGGCGCTCCAGTTGTATGCCCATAGGCGGACCACCAATAATGAAGGGGTAAGTCAAGTAGGAACAGTGTTTTCAAATGAACAGGTCTCGATTCCTAGCCAACGCCGTTACGTGGCCTACTTCGCAAGTTTACTTTCTTTTCCTAAGGGTGTTGCTCTTGGACCTCCAGATGTAAAATTTTCAAAAGCTTGTAGTAGGGAACTGCGCCGAATTCGGCTTTATGACACAATTAATATTGAATCAGTCTTCTTTGTCATCACGGAGCTCCAAGAAGCTTCAAGTAAATTGTACACTCCATCTGTCGAAGTTACACGAAGTTATTGCAGGCGAATAAAGAAAGGTTATCAGAGAAGCGACAGCCATCAGTACTATCTCTCTTTTGTTGAAGATGATCAAAAAAGGAACATGACGGAAGAAGAAAAATCTCATAATGTAGTTCAAATGGACACGGAGATTCCAGTATTCTACGAAAAGTCCTGTCTTGACTACAATTTCAATAAACCTTTAACAGTAACTGGAGATGTGCGAGTCATATTCTATCAGAAAATGATTGGAGGGCGTCTCTTCTATGCCTGCTTCAACACATCCTTCATCAAGAACAGCTTGCTTCAGCTTACTGCTGGTGAGTTGGATAAAGTTGGGAGTAGAGGTAAATCAATATGTGGCCCCGCGTTTTGCTTGGAGCTCCTATTCGGACCTGCCAATGCTAAACACTCGTATTCGACTTGGTCCGACAATGGCGATTCTTCGGACGAGGCATTCTAA 1287 42.89 MGLKFSKHGHGKVENLTLQHHLINYLSESFYLRHLVSKQRRRMLVAGFDLDMSYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMRHRDHYKVYNLCIEESYDPSHFHGRVEAFPFDDNHVPPLQMIKLFCESVHSWLSCNQKNVAVIHCMAGKGRTGMMVCAYLVYSGMSAEEALQLYAHRRTTNNEGVSQVGTVFSNEQVSIPSQRRYVAYFASLLSFPKGVALGPPDVKFSKACSRELRRIRLYDTINIESVFFVITELQEASSKLYTPSVEVTRSYCRRIKKGYQRSDSHQYYLSFVEDDQKRNMTEEEKSHNVVQMDTEIPVFYEKSCLDYNFNKPLTVTGDVRVIFYQKMIGGRLFYACFNTSFIKNSLLQLTAGELDKVGSRGKSICGPAFCLELLFGPANAKHSYSTWSDNGDSSDEAF 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6538711 6543057 - Bma014919.1 Bma02g00437 77687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00437 428 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 329 407 IPR035892 -
Bma02g00437 428 Pfam Tyrosine phosphatase family 143 189 IPR026893 GO:0004721
Bma02g00437 428 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 129 184 IPR000387 GO:0016311|GO:0016791
Bma02g00437 428 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 1 412 - -
Bma02g00437 428 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 48 218 IPR029021 -
Bma02g00437 428 Gene3D Protein tyrosine phosphatase superfamily 29 221 IPR029021 -
Bma02g00437 428 ProSiteProfiles C2 tensin-type domain profile. 243 408 IPR014020 -
Bma02g00437 428 Pfam C2 domain of PTEN tumour-suppressor protein 322 405 IPR014020 -
Bma02g00437 428 SMART PTEN_C2_2 264 407 IPR014020 -
Bma02g00437 428 ProSitePatterns Tyrosine specific protein phosphatases active site. 149 159 IPR016130 GO:0016311|GO:0016791
Bma02g00437 428 PANTHER BNAC03G16750D PROTEIN 1 412 - -
Bma02g00437 428 ProSiteProfiles Phosphatase tensin-type domain profile. 41 222 IPR029023 -
Bma02g00437 428 Gene3D - 274 410 - -
Bma02g00437 428 CDD PTP_PTEN 51 218 IPR045101 GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00437 Bma-Chr2:6538711 Bma15g00872 Bma-Chr15:25723058 5.15E-47 dispersed
Bma02g00437 Bma-Chr2:6538711 Bma03g01356 Bma-Chr3:29597487 2.66E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00437 K01110 - zju:107415906 638.647