Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma02g00437 | ATGGGTTTGAAATTTTCTAAGCATGGGCATGGGAAGGTGGAAAACCTAACTCTGCAACATCACCTGATAAATTATCTTTCCGAAAGCTTTTATCTTCGCCACTTGGTATCCAAGCAACGAAGAAGAATGCTTGTTGCCGGTTTTGATCTTGACATGTCCTATATTACAGATCGTATATTGGCTATGTCTTTCCCTGCAGAACGCATGCGTGCTGTTTATCGTAATCCTCTTTGGCAGGTTAAGTCTGTTCTTGACATGAGACATCGAGATCATTATAAGGTTTATAACCTATGCATAGAAGAATCATACGATCCATCTCATTTCCATGGCCGTGTAGAGGCATTTCCTTTTGATGACAACCATGTCCCTCCTCTCCAAATGATTAAGCTTTTCTGCGAGAGTGTTCATTCGTGGCTATCATGCAACCAAAAGAATGTTGCCGTGATACACTGCATGGCAGGCAAAGGTCGAACGGGCATGATGGTATGTGCCTATCTTGTATACAGTGGCATGTCAGCGGAGGAGGCGCTCCAGTTGTATGCCCATAGGCGGACCACCAATAATGAAGGGGTAAGTCAAGTAGGAACAGTGTTTTCAAATGAACAGGTCTCGATTCCTAGCCAACGCCGTTACGTGGCCTACTTCGCAAGTTTACTTTCTTTTCCTAAGGGTGTTGCTCTTGGACCTCCAGATGTAAAATTTTCAAAAGCTTGTAGTAGGGAACTGCGCCGAATTCGGCTTTATGACACAATTAATATTGAATCAGTCTTCTTTGTCATCACGGAGCTCCAAGAAGCTTCAAGTAAATTGTACACTCCATCTGTCGAAGTTACACGAAGTTATTGCAGGCGAATAAAGAAAGGTTATCAGAGAAGCGACAGCCATCAGTACTATCTCTCTTTTGTTGAAGATGATCAAAAAAGGAACATGACGGAAGAAGAAAAATCTCATAATGTAGTTCAAATGGACACGGAGATTCCAGTATTCTACGAAAAGTCCTGTCTTGACTACAATTTCAATAAACCTTTAACAGTAACTGGAGATGTGCGAGTCATATTCTATCAGAAAATGATTGGAGGGCGTCTCTTCTATGCCTGCTTCAACACATCCTTCATCAAGAACAGCTTGCTTCAGCTTACTGCTGGTGAGTTGGATAAAGTTGGGAGTAGAGGTAAATCAATATGTGGCCCCGCGTTTTGCTTGGAGCTCCTATTCGGACCTGCCAATGCTAAACACTCGTATTCGACTTGGTCCGACAATGGCGATTCTTCGGACGAGGCATTCTAA | 1287 | 42.89 | MGLKFSKHGHGKVENLTLQHHLINYLSESFYLRHLVSKQRRRMLVAGFDLDMSYITDRILAMSFPAERMRAVYRNPLWQVKSVLDMRHRDHYKVYNLCIEESYDPSHFHGRVEAFPFDDNHVPPLQMIKLFCESVHSWLSCNQKNVAVIHCMAGKGRTGMMVCAYLVYSGMSAEEALQLYAHRRTTNNEGVSQVGTVFSNEQVSIPSQRRYVAYFASLLSFPKGVALGPPDVKFSKACSRELRRIRLYDTINIESVFFVITELQEASSKLYTPSVEVTRSYCRRIKKGYQRSDSHQYYLSFVEDDQKRNMTEEEKSHNVVQMDTEIPVFYEKSCLDYNFNKPLTVTGDVRVIFYQKMIGGRLFYACFNTSFIKNSLLQLTAGELDKVGSRGKSICGPAFCLELLFGPANAKHSYSTWSDNGDSSDEAF | 428 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6538711 | 6543057 | - | Bma014919.1 | Bma02g00437 | 77687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma02g00437 | 428 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 329 | 407 | IPR035892 | - | |
Bma02g00437 | 428 | Pfam | Tyrosine phosphatase family | 143 | 189 | IPR026893 | GO:0004721 | |
Bma02g00437 | 428 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 129 | 184 | IPR000387 | GO:0016311|GO:0016791 | |
Bma02g00437 | 428 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 1 | 412 | - | - | |
Bma02g00437 | 428 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 48 | 218 | IPR029021 | - | |
Bma02g00437 | 428 | Gene3D | Protein tyrosine phosphatase superfamily | 29 | 221 | IPR029021 | - | |
Bma02g00437 | 428 | ProSiteProfiles | C2 tensin-type domain profile. | 243 | 408 | IPR014020 | - | |
Bma02g00437 | 428 | Pfam | C2 domain of PTEN tumour-suppressor protein | 322 | 405 | IPR014020 | - | |
Bma02g00437 | 428 | SMART | PTEN_C2_2 | 264 | 407 | IPR014020 | - | |
Bma02g00437 | 428 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 149 | 159 | IPR016130 | GO:0016311|GO:0016791 | |
Bma02g00437 | 428 | PANTHER | BNAC03G16750D PROTEIN | 1 | 412 | - | - | |
Bma02g00437 | 428 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 41 | 222 | IPR029023 | - | |
Bma02g00437 | 428 | Gene3D | - | 274 | 410 | - | - | |
Bma02g00437 | 428 | CDD | PTP_PTEN | 51 | 218 | IPR045101 | GO:0016791 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00437 | Bma-Chr2:6538711 | Bma15g00872 | Bma-Chr15:25723058 | 5.15E-47 | dispersed | |
Bma02g00437 | Bma-Chr2:6538711 | Bma03g01356 | Bma-Chr3:29597487 | 2.66E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma02g00437 | K01110 | - | zju:107415906 | 638.647 |