Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00448 ATGGCCACCGCCTTTACAGTTCCTCTCTACCTCCACCTTTTCTTCCTCTTCTTCCACAAACTCACTATTCAAGTGGGCTGTGTTTCTCCTCAACCGTACACTCCCGACGATGTTATCCTCATCAACTGTGGTTCTTCCGGCAACTCGACTGCCGATGATAATCGGATCTGGGCCGGAGATGTTAACTCCAAATTCTTTTCTCTTGAAATCACCCAGAATAAAGAATCTGCGACTTCAAAGGCTCTGCAACAGTCCTCTACCGTCGCAAATGTTCCTTTCTCCTCCGCAAGGCTCTCTCGCGTTCAGTTTACCTACTCTTTCCCGGTCACTCCAGGCATGAAATTCGTCCGGCTGTACTTTTACCCAGAATTCTACTCTGAATTTGACCGTTCGTTAGCTCTTTTCTCTGTCACTGCCGGCGACCGATTCACCCTCCTGAAGGACTTTAACGCTTCGGTCACTGCCGATGCGTACCGCGAAACAACAATCATGAGAGAATTCTGTCTCAACGTGAAGGAAGATCAGAAGCTGAACATAAATTTCACTCCGAGCGTTAATGGTAATTTACGGACGTATGCTTTTGTTAATGGAATCGAAATCGTTTCGATGCCTCCATATCTTTACTATACGCCAGACGGAATATTAGGGACTCAGTTCATTGGACAACAGAGAGCTTTTCCCATCACCAATAATACCGCTCTGGAGATGGTTTACAGGCTGAACGTTGGCGGAGGATCGATCTCGGGCAATAAAGACACCGGGATGTTCAGAAGCTGGTCGCCGGATCTAGATTACTTGACGGAAGCTGGACCAGACTTAGTTCTTCCTGTTAACACCAGTATTCAGCTCAGCTTCACTCAAATACAAAGTTACACAGCCCCTGAGGATGTTTATCGCACTGCTAGAACGATGGGGTTGAACAAAACAATTAACAAGAGCTTCAATCTCACATGGGAATTCTCTGTAGATCCTACGTTTTATTACCTGGTGAGGCTCCATTTTTGCGAGTTTCAACCGGAGATAACCGACCAACATCAAAGGGTTTTCCTCATATACATAAATAATCAGACCGCCGAAACTAACGCCGATGTAATTATCTGGGCCGGAGGAAGAGGGGTTCCTTACTACAGAGATTACACCGTTTTGGTACCTAGAAGCTCAGGAGAGAAAAGAGTAAATCTCTCCATTGCTCTTCAAGCGAACCCGGATGATTGGAAAACTGTTTACACCGATGCGATCTTGAACGGAGCCGAAATTTTCAAGTTAAACGACTCTACCGGAAATCTAGCAGGTCAAAATCCAGACCCACCTCCGACTACCCCTTCTGCCTCAGTCCATTCCACGCCGATTTCGGAATCAGGAAGGTCGAGGGATAATGTGATTGTAAAAATAGCAGCGGTTATTGCCGGGATTCCAGGATTAGCTATTGTTGTAGTGGGATTCTTCCTTTGCCGGCGACGAAGAGGAAGCGCGAAGCACCATAACTCCACCGAGAAAGCTTCGGGCTGGAGTCCATTTTCTTTCGCTACAACGACGAAGTCCAACAAGACACGCGGCTCGGCTCTACCGTCCGATTTGTGTCGCTGCTTCTCATTGGCTGAGATCAAATCGGCCACCAACAATTTCGACGACGTTTTCGTCATCGGAGTAGGAGGATTCGGCAACGTATACAAAGGTTACATCGACGAAGGGTCGATCCCCGTTGCGATCAAACGGCTAAAACCAGGCTCTAAACAGGGGGCCCACGAGTTCAAAACAGAGATCGAGATGCTTTCCCAGCTTCGTCATCTTCATCTAGTGTCTCTAATCGGCTACTGTAACGACGGAAACGAGATGATCCTGGTGTACGATTTCATGGAGCGTGGGACCCTCCAGAGCCATATCTACGGCTGCGATGAGAACAATCCACCTCTCTCGTGGAAGCAACGGCTGGAGATTTGCGTAGGAGCAGCGCGTGGGCTGCATTATCTCCATACAGGAGCGAAACACACGATCATTCATCGCGACGTCAAGTCAACGAACATCTTATTAGATGAGAAATGGGTGGCTAAGGTCTCAGACTTTGGTCTATCAAAAACAGGGCCCACGAGTGAAACCAAAGGATACGTAACCACCGTCGTGAAAGGCAGTTTTGGGTACTTAGACCCGGAGTACTATCGACGGCATCAGCTGACGGAGAAATCAGATGTGTACTCGTTCGGCGTTGTGCTCTGCGAAGTACTATGTGGACGACCGGCGTTGACTCGAACGGAAGAGAAAGATAAGGTCAGCCTCGCCGAGTGGGTCCGATCATCGTACAATCGAAACAATCTAGTCCGAGTCGTCGACCCAAATCTGAAGAAAGAAATTTCTCAAAGATGCTTGAAAAAGATGGGCGAGATCATCATGAGTTGTCTGAACGACGTTGGAGTTGAACGACCCTCCATGAACGATCTAGTCTGGGGACTGGAGTTCGCACTGCAACTGCAAGAAACGGCAGGGGATGATCCGATTTCCGACGGAGTTGACAGCGAAGCAAAGGACAGGGAGGACGGCGACCAAACTCCGTTTGTAAGCTCAAAAAACACAGGCTCTGAATATGACATCGATGACATGTTCAGTAGCAGCGATGCCTCGAAAACGGGCAATGATTCGAACAAAGGAGCTTCCAAGTCGGTTTTCTCTGAAATTATGGATCCGAAGGGACGATAA 2691 48.12 MATAFTVPLYLHLFFLFFHKLTIQVGCVSPQPYTPDDVILINCGSSGNSTADDNRIWAGDVNSKFFSLEITQNKESATSKALQQSSTVANVPFSSARLSRVQFTYSFPVTPGMKFVRLYFYPEFYSEFDRSLALFSVTAGDRFTLLKDFNASVTADAYRETTIMREFCLNVKEDQKLNINFTPSVNGNLRTYAFVNGIEIVSMPPYLYYTPDGILGTQFIGQQRAFPITNNTALEMVYRLNVGGGSISGNKDTGMFRSWSPDLDYLTEAGPDLVLPVNTSIQLSFTQIQSYTAPEDVYRTARTMGLNKTINKSFNLTWEFSVDPTFYYLVRLHFCEFQPEITDQHQRVFLIYINNQTAETNADVIIWAGGRGVPYYRDYTVLVPRSSGEKRVNLSIALQANPDDWKTVYTDAILNGAEIFKLNDSTGNLAGQNPDPPPTTPSASVHSTPISESGRSRDNVIVKIAAVIAGIPGLAIVVVGFFLCRRRRGSAKHHNSTEKASGWSPFSFATTTKSNKTRGSALPSDLCRCFSLAEIKSATNNFDDVFVIGVGGFGNVYKGYIDEGSIPVAIKRLKPGSKQGAHEFKTEIEMLSQLRHLHLVSLIGYCNDGNEMILVYDFMERGTLQSHIYGCDENNPPLSWKQRLEICVGAARGLHYLHTGAKHTIIHRDVKSTNILLDEKWVAKVSDFGLSKTGPTSETKGYVTTVVKGSFGYLDPEYYRRHQLTEKSDVYSFGVVLCEVLCGRPALTRTEEKDKVSLAEWVRSSYNRNNLVRVVDPNLKKEISQRCLKKMGEIIMSCLNDVGVERPSMNDLVWGLEFALQLQETAGDDPISDGVDSEAKDREDGDQTPFVSSKNTGSEYDIDDMFSSSDASKTGNDSNKGASKSVFSEIMDPKGR 896
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6850841 6872289 + Bma014932.1 Bma02g00448 77698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00448 896 Pfam Malectin-like domain 41 421 IPR024788 -
Bma02g00448 896 SMART serkin_6 542 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00448 896 MobiDBLite consensus disorder prediction 827 896 - -
Bma02g00448 896 MobiDBLite consensus disorder prediction 849 885 - -
Bma02g00448 896 Gene3D Transferase(Phosphotransferase) domain 1 619 833 - -
Bma02g00448 896 MobiDBLite consensus disorder prediction 425 453 - -
Bma02g00448 896 PANTHER RECEPTOR-LIKE PROTEIN KINASE FERONIA 22 852 - -
Bma02g00448 896 PANTHER OS07G0166700 PROTEIN 22 852 IPR045272 GO:0004714|GO:0006468
Bma02g00448 896 ProSitePatterns Protein kinases ATP-binding region signature. 548 571 IPR017441 GO:0005524
Bma02g00448 896 ProSiteProfiles Protein kinase domain profile. 542 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma02g00448 896 MobiDBLite consensus disorder prediction 833 848 - -
Bma02g00448 896 SUPERFAMILY Protein kinase-like (PK-like) 527 814 IPR011009 -
Bma02g00448 896 CDD STKc_IRAK 548 813 - -
Bma02g00448 896 Gene3D Phosphorylase Kinase; domain 1 505 618 - -
Bma02g00448 896 ProSitePatterns Serine/Threonine protein kinases active-site signature. 665 677 IPR008271 GO:0004672|GO:0006468
Bma02g00448 896 Gene3D - 232 423 - -
Bma02g00448 896 Gene3D - 36 203 - -
Bma02g00448 896 Pfam Protein tyrosine and serine/threonine kinase 548 813 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00448 Bma-Chr2:6850841 Bma14g00283 Bma-Chr14:3579446 0 dispersed
Bma13g01242 Bma-Chr13:45752494 Bma02g00448 Bma-Chr2:6850841 1.90E-74 dispersed
Bma04g01375 Bma-Chr4:47356247 Bma02g00448 Bma-Chr2:6850841 0 transposed
Bma13g00443 Bma-Chr13:8238040 Bma02g00448 Bma-Chr2:6850841 0 transposed
Bma14g01243 Bma-Chr14:19989117 Bma02g00448 Bma-Chr2:6850841 0 transposed
Bma14g01049 Bma-Chr14:12512218 Bma02g00448 Bma-Chr2:6850841 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66345 PF12819 Malectin_like 1.30E-46 CL0202 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00448 - - qsu:112031879 1008.05