Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma02g00465 ATGACACCTGCTGATTCTTCACGTGAGGAGAATGTATATTTGGCGAAGCTGGCAGAACAGGCTGAACGTTATGACGAAATGGTCGAGTTTATGGAGAAAGTTGTAAAGACCGTGGATGTCGAGGAGCTGACTGTAGAAGAAAGGAACCTTCTATCTGTGGCTTATAAGAATGTGATTGGGGCTAGGAGGGCTTCATGGAGAATTATTTCTTCCATTGAGCAGAAAGAGGAGAGTAGGGGAAATGGGGATCACGATGCAACCATCAAGGACTATCGAGGAAAGATTGAAAATGAACTAAGCAAGATCTGTGATGGGATTTTAAGTCTTCTCGAGTCTCATCTCATCCCATCTGCATCATCTGCTGAGTCTAAAGTTTTTTATCTAAAAATGAAGGGGGATTATTACAGGTATCTTGCTGAGTTTAAGACTGGAGCTGAGAGAAAGGAAGCTGCAGAGAGCACGTTGTTTGCTTACAAGTCTGCTCAGGACATTGCCCTTGCAGATCTAGCTCCCACTCACCCTATTAGGCTTGGACTTGCACTTAATTTTTCAGTGTTTTACTATGAAATCCTGAACTCACCGGATCGTGCTTGCAATCTTGCAAAGCAGGCATTTGATGAGGCGATTTCTGAATTGGATACTTTGGGTGAGGAATCCTACAAGGATAGTACATTGATCATGCAACTTCTCCGAGACAATTTGACTCTCTGGACTTCTGATATTACGGATGATGCTGGAGACGAGATCAAGGAATCATCGAAACGTGAATCAGGCGACGGACAG 783 43.68 MTPADSSREENVYLAKLAEQAERYDEMVEFMEKVVKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNGDHDATIKDYRGKIENELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYYRYLAEFKTGAERKEAAESTLFAYKSAQDIALADLAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDDAGDEIKESSKRESGDGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7344096 7345303 + Bma030884 Bma02g00465 77715

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma02g00465 261 Pfam 14-3-3 protein 14 238 IPR023410 -
Bma02g00465 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Bma02g00465 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Bma02g00465 261 PANTHER 14-3-3-LIKE PROTEIN GF14-F 5 257 - -
Bma02g00465 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Bma02g00465 261 Coils Coil 14 34 - -
Bma02g00465 261 PIRSF 14-3-3 3 250 IPR000308 -
Bma02g00465 261 SMART 1433_4 8 251 IPR023410 -
Bma02g00465 261 Gene3D - 1 251 IPR036815 -
Bma02g00465 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Bma02g00465 261 PANTHER 14-3-3 PROTEIN 5 257 IPR000308 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma02g00465 K06630 YWHAE; 14-3-3 protein epsilon - jre:108988028 479.559
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00465 Bma-Chr2:7344096 Bma05g01414 Bma-Chr5:53506669 4.23E-142 dispersed
Bma15g01066 Bma-Chr15:42859036 Bma02g00465 Bma-Chr2:7344096 2.07E-122 dispersed
Bma14g01097 Bma-Chr14:13688336 Bma02g00465 Bma-Chr2:7344096 4.77E-170 transposed
Bma01g01107 Bma-Chr1:11652850 Bma02g00465 Bma-Chr2:7344096 5.89E-171 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma01g01396 BCT 4 257 14-3-3 family AT4G09000 84.3 1.5e-114 409.5
Bma01g01107 . 9 249 14-3-3 family AT4G09000 85.1 1.4e-112 402.9
Bma14g01097 . 6 241 14-3-3 family AT4G09000 85.6 3.5e-111 398.3
Bma02g00132 BCT 4 283 14-3-3 family AT4G09000 76.4 1.3e-110 396.4
Bma05g01414 . 5 269 14-3-3 family AT4G09000 77.0 5.6e-109 391.0
Bma02g00465 . 4 241 14-3-3 family AT4G09000 83.6 1.2e-108 389.8
Bma09g00130 . 10 259 14-3-3 family AT4G09000 72.4 2.6e-98 355.5
Bma15g01066 . 10 259 14-3-3 family AT4G09000 69.2 2.8e-92 335.5
Bma14g01663 . 4 239 14-3-3 family AT4G09000 72.3 8.1e-92 334.0
Bma11g01000 . 156 392 14-3-3 family AT4G09000 70.3 1.2e-90 330.1
Bma12g00720 . 4 238 14-3-3 family AT4G09000 70.0 5.8e-90 327.8
Bma02g01394 . 8 242 14-3-3 family AT4G09000 69.2 1.3e-89 326.6
Bma04g00438 . 11 242 14-3-3 family AT4G09000 68.8 1.1e-85 313.5
Bma01g01033 BCT 1 93 14-3-3 family AT4G09000 89.2 2.1e-39 159.8
Bma01g01396 BCT 6 275 14-3-3 family AT1G78300 84.9 1.5e-120 429.1
Bma02g00132 BCT 6 301 14-3-3 family AT1G78300 77.9 3.5e-117 417.9
Bma14g01097 . 6 253 14-3-3 family AT1G78300 86.3 5.0e-116 414.1
Bma01g01107 . 9 244 14-3-3 family AT1G78300 89.0 1.4e-113 406.0
Bma02g00465 . 6 253 14-3-3 family AT1G78300 84.7 1.8e-113 405.6
Bma05g01414 . 5 269 14-3-3 family AT1G78300 77.0 3.0e-108 388.3
Bma09g00130 . 11 255 14-3-3 family AT1G78300 73.5 6.2e-98 354.0
Bma14g01663 . 8 256 14-3-3 family AT1G78300 70.6 3.5e-93 338.2
Bma15g01066 . 11 255 14-3-3 family AT1G78300 70.2 3.9e-92 334.7
Bma11g01000 . 156 401 14-3-3 family AT1G78300 67.7 7.3e-91 330.5
Bma02g01394 . 11 248 14-3-3 family AT1G78300 70.0 7.3e-91 330.5
Bma12g00720 . 7 247 14-3-3 family AT1G78300 69.5 1.6e-90 329.3
Bma04g00438 . 11 242 14-3-3 family AT1G78300 69.7 2.4e-86 315.5
Bma01g01033 BCT 1 93 14-3-3 family AT1G78300 88.2 1.9e-38 156.4
Bma02g00465 . 6 259 14-3-3 family AT5G38480 87.0 3.6e-119 424.5
Bma01g01107 . 9 247 14-3-3 family AT5G38480 90.8 6.2e-119 423.7
Bma14g01097 . 6 254 14-3-3 family AT5G38480 88.8 1.1e-118 422.9
Bma01g01396 BCT 5 272 14-3-3 family AT5G38480 81.0 6.7e-113 403.7
Bma02g00132 BCT 6 298 14-3-3 family AT5G38480 74.4 2.0e-109 392.1
Bma05g01414 . 6 268 14-3-3 family AT5G38480 73.4 1.4e-102 369.4
Bma09g00130 . 10 256 14-3-3 family AT5G38480 71.3 2.2e-95 345.5
Bma14g01663 . 8 254 14-3-3 family AT5G38480 73.5 9.0e-94 340.1
Bma12g00720 . 7 247 14-3-3 family AT5G38480 72.4 2.2e-92 335.5
Bma02g01394 . 11 248 14-3-3 family AT5G38480 72.5 1.4e-91 332.8
Bma15g01066 . 10 256 14-3-3 family AT5G38480 68.4 7.9e-90 327.0
Bma11g01000 . 156 396 14-3-3 family AT5G38480 71.2 2.3e-89 325.5
Bma04g00438 . 10 242 14-3-3 family AT5G38480 68.9 2.2e-84 308.9
Bma01g01033 BCT 1 93 14-3-3 family AT5G38480 88.2 1.1e-38 157.1
Bma01g01396 BCT 3 257 14-3-3 family AT1G35160 84.7 2.8e-115 411.8
Bma01g01107 . 9 243 14-3-3 family AT1G35160 87.2 1.3e-112 402.9
Bma02g00132 BCT 3 283 14-3-3 family AT1G35160 77.2 6.5e-112 400.6
Bma14g01097 . 6 240 14-3-3 family AT1G35160 86.0 7.2e-111 397.1
Bma02g00465 . 3 240 14-3-3 family AT1G35160 85.4 4.7e-110 394.4
Bma05g01414 . 4 269 14-3-3 family AT1G35160 77.1 6.8e-109 390.6
Bma09g00130 . 11 261 14-3-3 family AT1G35160 72.1 7.0e-98 354.0
Bma15g01066 . 11 266 14-3-3 family AT1G35160 68.4 3.1e-93 338.6
Bma14g01663 . 8 239 14-3-3 family AT1G35160 73.9 4.4e-92 334.7
Bma11g01000 . 151 391 14-3-3 family AT1G35160 70.0 4.9e-91 331.3
Bma02g01394 . 6 241 14-3-3 family AT1G35160 70.6 2.4e-90 328.9
Bma12g00720 . 2 237 14-3-3 family AT1G35160 70.6 9.2e-90 327.0
Bma04g00438 . 1 242 14-3-3 family AT1G35160 66.4 2.3e-85 312.4
Bma01g01033 BCT 1 93 14-3-3 family AT1G35160 89.2 3.3e-39 159.1
Bma02g00465 . 4 254 14-3-3 family AT5G16050 84.5 1.3e-114 409.5
Bma14g01097 . 5 255 14-3-3 family AT5G16050 82.1 2.0e-112 402.1
Bma01g01107 . 8 244 14-3-3 family AT5G16050 85.2 4.3e-110 394.4
Bma01g01396 BCT 6 270 14-3-3 family AT5G16050 75.5 1.4e-105 379.4
Bma02g00132 BCT 3 296 14-3-3 family AT5G16050 68.0 1.6e-101 365.9
Bma05g01414 . 4 268 14-3-3 family AT5G16050 69.8 1.2e-96 349.7
Bma09g00130 . 10 254 14-3-3 family AT5G16050 67.8 1.4e-89 326.2
Bma14g01663 . 3 248 14-3-3 family AT5G16050 66.1 2.5e-86 315.5
Bma02g01394 . 5 248 14-3-3 family AT5G16050 65.0 1.1e-84 310.1
Bma12g00720 . 1 247 14-3-3 family AT5G16050 65.1 3.1e-84 308.5
Bma15g01066 . 10 254 14-3-3 family AT5G16050 64.9 3.1e-84 308.5
Bma11g01000 . 150 401 14-3-3 family AT5G16050 63.4 9.0e-84 307.0
Bma04g00438 . 10 242 14-3-3 family AT5G16050 63.8 3.3e-78 288.5
Bma09g00130 . 9 255 14-3-3 family AT5G10450 84.6 1.2e-112 402.9
Bma15g01066 . 9 255 14-3-3 family AT5G10450 81.0 2.0e-107 385.6
Bma14g01097 . 7 251 14-3-3 family AT5G10450 77.2 7.9e-104 373.6
Bma01g01107 . 10 244 14-3-3 family AT5G10450 78.4 8.8e-103 370.2
Bma01g01396 BCT 1 266 14-3-3 family AT5G10450 72.7 1.5e-102 369.4
Bma02g00465 . 4 251 14-3-3 family AT5G10450 73.9 1.1e-100 363.2
Bma02g00132 BCT 3 292 14-3-3 family AT5G10450 66.3 1.7e-98 355.9
Bma04g00438 . 9 242 14-3-3 family AT5G10450 80.2 1.7e-98 355.9
Bma05g01414 . 7 269 14-3-3 family AT5G10450 68.9 4.7e-96 347.8
Bma11g01000 . 150 392 14-3-3 family AT5G10450 66.7 1.2e-86 316.6
Bma12g00720 . 1 238 14-3-3 family AT5G10450 67.2 2.0e-86 315.8
Bma02g01394 . 5 242 14-3-3 family AT5G10450 66.8 2.0e-86 315.8
Bma14g01663 . 8 239 14-3-3 family AT5G10450 65.5 1.0e-82 303.5
Bma02g00465 . 6 261 14-3-3 family AT3G02520 89.5 5.1e-124 440.7
Bma14g01097 . 4 258 14-3-3 family AT3G02520 87.9 4.8e-122 434.1
Bma01g01107 . 7 244 14-3-3 family AT3G02520 92.9 8.2e-122 433.3
Bma01g01396 BCT 6 274 14-3-3 family AT3G02520 80.7 1.3e-114 409.5
Bma02g00132 BCT 6 300 14-3-3 family AT3G02520 73.6 8.5e-111 396.7
Bma05g01414 . 5 268 14-3-3 family AT3G02520 76.1 5.7e-107 384.0
Bma09g00130 . 10 254 14-3-3 family AT3G02520 73.5 8.3e-98 353.6
Bma14g01663 . 6 256 14-3-3 family AT3G02520 71.2 1.5e-94 342.8
Bma02g01394 . 8 247 14-3-3 family AT3G02520 71.1 5.2e-92 334.3
Bma12g00720 . 4 238 14-3-3 family AT3G02520 73.4 6.8e-92 334.0
Bma15g01066 . 10 254 14-3-3 family AT3G02520 70.2 2.6e-91 332.0
Bma11g01000 . 153 405 14-3-3 family AT3G02520 67.5 2.2e-90 328.9
Bma04g00438 . 10 242 14-3-3 family AT3G02520 68.5 5.5e-86 314.3
Bma01g01033 BCT 1 93 14-3-3 family AT3G02520 87.1 3.9e-39 158.7
Bma09g00130 . 9 256 14-3-3 family AT5G65430 84.3 2.8e-114 408.3
Bma15g01066 . 9 257 14-3-3 family AT5G65430 81.5 9.2e-110 393.3
Bma14g01097 . 7 241 14-3-3 family AT5G65430 79.2 2.9e-103 371.7
Bma01g01107 . 10 246 14-3-3 family AT5G65430 78.2 4.9e-103 370.9
Bma01g01396 BCT 1 257 14-3-3 family AT5G65430 75.2 3.2e-102 368.2
Bma02g00465 . 7 241 14-3-3 family AT5G65430 77.1 3.0e-100 361.7
Bma04g00438 . 9 242 14-3-3 family AT5G65430 79.7 4.3e-99 357.8
Bma02g00132 BCT 8 283 14-3-3 family AT5G65430 68.6 2.4e-97 352.1
Bma05g01414 . 4 269 14-3-3 family AT5G65430 69.3 4.0e-97 351.3
Bma02g01394 . 5 242 14-3-3 family AT5G65430 69.3 2.0e-88 322.4
Bma12g00720 . 1 238 14-3-3 family AT5G65430 69.3 9.9e-88 320.1
Bma11g01000 . 150 392 14-3-3 family AT5G65430 67.5 2.9e-87 318.5
Bma14g01663 . 8 239 14-3-3 family AT5G65430 67.7 2.3e-84 308.9
Bma12g00720 . 1 253 14-3-3 family AT2G42590 81.5 1.5e-113 406.0
Bma02g01394 . 5 248 14-3-3 family AT2G42590 82.0 3.6e-112 401.4
Bma11g01000 . 150 405 14-3-3 family AT2G42590 76.3 2.9e-106 381.7
Bma14g01663 . 7 246 14-3-3 family AT2G42590 77.9 2.3e-103 372.1
Bma14g01097 . 8 248 14-3-3 family AT2G42590 71.4 1.0e-90 330.1
Bma01g01107 . 11 245 14-3-3 family AT2G42590 74.9 1.7e-90 329.3
Bma02g00465 . 8 253 14-3-3 family AT2G42590 70.7 5.0e-90 327.8
Bma01g01396 BCT 8 263 14-3-3 family AT2G42590 66.4 8.1e-88 320.5
Bma09g00130 . 11 254 14-3-3 family AT2G42590 65.6 4.6e-83 304.7
Bma02g00132 BCT 8 289 14-3-3 family AT2G42590 59.9 1.7e-82 302.8
Bma05g01414 . 8 268 14-3-3 family AT2G42590 62.5 1.9e-81 299.3
Bma15g01066 . 11 254 14-3-3 family AT2G42590 62.3 1.3e-77 286.6
Bma04g00438 . 11 242 14-3-3 family AT2G42590 59.9 4.0e-71 265.0
Bma02g01394 . 10 247 14-3-3 family AT1G22300 77.3 8.1e-103 370.2
Bma12g00720 . 6 242 14-3-3 family AT1G22300 77.6 1.2e-101 366.3
Bma11g01000 . 155 397 14-3-3 family AT1G22300 77.4 1.5e-101 365.9
Bma14g01663 . 5 244 14-3-3 family AT1G22300 76.3 4.4e-101 364.4
Bma02g00465 . 5 246 14-3-3 family AT1G22300 70.7 5.4e-91 330.9
Bma01g01107 . 7 244 14-3-3 family AT1G22300 72.3 1.2e-90 329.7
Bma14g01097 . 4 246 14-3-3 family AT1G22300 68.7 6.6e-89 323.9
Bma01g01396 BCT 8 261 14-3-3 family AT1G22300 65.2 1.2e-85 313.2
Bma05g01414 . 8 268 14-3-3 family AT1G22300 64.0 8.4e-84 307.0
Bma02g00132 BCT 8 287 14-3-3 family AT1G22300 59.9 6.0e-82 300.8
Bma09g00130 . 11 254 14-3-3 family AT1G22300 63.0 1.2e-77 286.6
Bma15g01066 . 11 254 14-3-3 family AT1G22300 62.7 6.0e-74 274.2
Bma04g00438 . 11 242 14-3-3 family AT1G22300 58.2 1.1e-67 253.4
Bma14g01663 . 5 249 14-3-3 family AT1G34760 80.0 1.7e-105 379.0
Bma02g01394 . 15 246 14-3-3 family AT1G34760 82.3 2.5e-104 375.2
Bma12g00720 . 11 246 14-3-3 family AT1G34760 80.9 2.1e-103 372.1
Bma11g01000 . 155 401 14-3-3 family AT1G34760 76.9 7.6e-101 363.6
Bma02g00465 . 5 250 14-3-3 family AT1G34760 70.3 8.7e-89 323.6
Bma01g01107 . 7 244 14-3-3 family AT1G34760 71.4 1.5e-88 322.8
Bma14g01097 . 4 250 14-3-3 family AT1G34760 69.2 6.2e-87 317.4
Bma01g01396 BCT 12 260 14-3-3 family AT1G34760 67.1 3.4e-85 311.6
Bma05g01414 . 8 269 14-3-3 family AT1G34760 64.5 1.4e-83 306.2
Bma02g00132 BCT 12 286 14-3-3 family AT1G34760 61.1 5.1e-81 297.7
Bma09g00130 . 15 257 14-3-3 family AT1G34760 63.8 8.2e-79 290.4
Bma15g01066 . 15 255 14-3-3 family AT1G34760 61.8 1.8e-73 272.7
Bma04g00438 . 11 242 14-3-3 family AT1G34760 58.2 9.4e-67 250.4
Bma14g01663 . 2 258 14-3-3 family AT1G26480 83.5 9.8e-115 409.8
Bma02g01394 . 9 248 14-3-3 family AT1G26480 81.3 8.0e-109 390.2
Bma12g00720 . 5 242 14-3-3 family AT1G26480 80.3 2.9e-106 381.7
Bma11g01000 . 152 400 14-3-3 family AT1G26480 76.3 1.0e-103 373.2
Bma14g01097 . 5 255 14-3-3 family AT1G26480 71.5 3.4e-91 331.6
Bma02g00465 . 4 256 14-3-3 family AT1G26480 71.0 7.6e-91 330.5
Bma01g01107 . 8 244 14-3-3 family AT1G26480 73.8 6.4e-90 327.4
Bma01g01396 BCT 8 271 14-3-3 family AT1G26480 68.0 1.6e-88 322.8
Bma02g00132 BCT 8 291 14-3-3 family AT1G26480 62.1 1.2e-83 306.6
Bma05g01414 . 8 268 14-3-3 family AT1G26480 64.4 1.3e-82 303.1
Bma09g00130 . 11 254 14-3-3 family AT1G26480 65.2 1.4e-81 299.7
Bma15g01066 . 11 254 14-3-3 family AT1G26480 63.1 8.1e-77 283.9
Bma04g00438 . 11 242 14-3-3 family AT1G26480 59.9 3.7e-69 258.5
Bma14g01663 . 5 237 14-3-3 family AT1G78220 53.0 2.2e-65 245.7
Bma02g01394 . 10 240 14-3-3 family AT1G78220 52.6 1.1e-64 243.4
Bma12g00720 . 6 236 14-3-3 family AT1G78220 52.2 1.9e-64 242.7
Bma11g01000 . 155 404 14-3-3 family AT1G78220 51.0 5.5e-64 241.1
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000486 6 4 5 6 5 2 5 3 3 3 3 3 6 3 2 6 3 6 6 3 3 3 3 3 3 3 3 6 4 0 114
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma02g00465 Bma_Chr02 FPKM 10.413774 13.190228 16.740599 16.202343 13.750661 13.7737 12.028938 27.888517 26.72644 27.917271